Introduction - MEME Suite

GT-Scan finds optimal targets for genome editing or regulatory interference using CRISPR/Cas or zinc-finger nuclease systems.

# The MEME Suite

## Motif-based sequence analysis tools

# MEME ## Multiple Em for Motif Elicitation | # CentriMo ## Local Motif Enrichment Analysis | # FIMO ## Find Individual Motif Occurrences
# STREME ## Sensitive, Thorough, Rapid, Enriched Motif Elicitation | # AME ## Analysis of Motif Enrichment | # MAST ## Motif Alignment & Search Tool
# MEME-ChIP ## Motif Analysis of Large Nucleotide Datasets | # SpaMo ## Spaced Motif Analysis Tool | # MCAST ## Motif Cluster Alignment and Search Tool
# GLAM2 ## Gapped Local Alignment of Motifs | # GOMo ## Gene Ontology for Motifs | # GLAM2Scan ## Scanning with Gapped Motifs
# MoMo ## Modification Motifs | # Tomtom ## Motif Comparison Tool | # GT-Scan ## Identifying Unique Genomic Targets
# T-Gene ## Predicting Target Genes | # DREME ## Discriminative Regular Expression Motif Elicitation |

Maintenance and development of the MEME Suite is funded by grant R01 GM103544 from the National Institutes of Health.

Developed and maintained by