<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<!-- Document definition -->
<!DOCTYPE MEME[
<!ELEMENT MEME (
  training_set,
  model, 
  motifs, 
  scanned_sites_summary?
)>
<!ATTLIST MEME 
  version CDATA #REQUIRED
  release CDATA #REQUIRED
>
<!-- Training-set elements -->
<!ELEMENT training_set (alphabet, ambigs, sequence*, letter_frequencies)>
<!ATTLIST training_set primary_sequences CDATA #REQUIRED primary_count CDATA #REQUIRED primary_positions CDATA #REQUIRED
  control_sequences CDATA "" control_count CDATA "" control_positions CDATA "">
<!ELEMENT alphabet (letter*)>
<!ATTLIST alphabet name CDATA #REQUIRED>
<!ELEMENT ambigs (letter*)>
<!ELEMENT letter EMPTY>
<!ATTLIST letter id ID #REQUIRED>
<!ATTLIST letter symbol CDATA #REQUIRED>
<!ATTLIST letter equals CDATA #IMPLIED>
<!ATTLIST letter aliases CDATA #IMPLIED>
<!ATTLIST letter complement CDATA #IMPLIED>
<!ATTLIST letter name CDATA #IMPLIED>
<!ATTLIST letter colour CDATA #IMPLIED>
<!ELEMENT sequence EMPTY>
<!ATTLIST sequence id ID #REQUIRED
                   name CDATA #REQUIRED
                   length CDATA #REQUIRED
                   weight CDATA #REQUIRED
>
<!ELEMENT letter_frequencies (alphabet_array)>

<!-- Model elements -->
<!ELEMENT model (
  command_line,
  host,
  type,
  nmotifs,
  evalue_threshold,
  object_function,
  spfun,
  min_width,
  max_width,
  wg,
  ws,
  endgaps,
  minsites,
  maxsites,
  wnsites,
  spmap,
  spfuzz,
  prior,
  beta,
  maxiter,
  distance,
  num_positions,
  seed,
  hsfrac,
  searchsize,
  maxsize,
  norand,
  csites,
  strands,
  brief,
  psp_file,
  priors_file,
  reason_for_stopping,
  background_frequencies
)>
<!ELEMENT command_line (#PCDATA)*>
<!ELEMENT host (#PCDATA)*>
<!ELEMENT type (#PCDATA)*>
<!ELEMENT nmotifs (#PCDATA)*>
<!ELEMENT evalue_threshold (#PCDATA)*>
<!ELEMENT object_function (#PCDATA)*>
<!ELEMENT spfun (#PCDATA)*>
<!ELEMENT min_width (#PCDATA)*>
<!ELEMENT max_width (#PCDATA)*>
<!ELEMENT wg (#PCDATA)*>
<!ELEMENT ws (#PCDATA)*>
<!ELEMENT endgaps (#PCDATA)*>
<!ELEMENT minsites (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT wnsites (#PCDATA)*>
<!ELEMENT spmap (#PCDATA)*>
<!ELEMENT spfuzz (#PCDATA)*>
<!ELEMENT prior (#PCDATA)*>
<!ELEMENT beta (#PCDATA)*>
<!ELEMENT maxiter (#PCDATA)*>
<!ELEMENT distance (#PCDATA)*>
<!ELEMENT num_positions (#PCDATA)*>
<!ELEMENT seed (#PCDATA)*>
<!ELEMENT hsfrac (#PCDATA)*>
<!ELEMENT searchsize (#PCDATA)*>
<!ELEMENT maxsize (#PCDATA)*>
<!ELEMENT norand (#PCDATA)*>
<!ELEMENT csites (#PCDATA)*>
<!ELEMENT strands (#PCDATA)*>
<!ELEMENT brief (#PCDATA)*>
<!ELEMENT psp_file (#PCDATA)*>
<!ELEMENT priors_file (#PCDATA)*>
<!ELEMENT reason_for_stopping (#PCDATA)*>
<!ELEMENT background_frequencies (alphabet_array)>
<!ATTLIST background_frequencies source CDATA #REQUIRED
		   order CDATA #REQUIRED>

<!-- Motif elements -->
<!ELEMENT motifs (motif*)>
<!ELEMENT motif (scores, probabilities, regular_expression?, contributing_sites)>
<!ATTLIST motif id ID #REQUIRED
                name CDATA #REQUIRED
                alt CDATA ""
                width CDATA #REQUIRED
                sites CDATA #REQUIRED
                ic CDATA #REQUIRED
                re CDATA #REQUIRED
                llr CDATA #REQUIRED
                p_value CDATA #REQUIRED
                e_value CDATA #REQUIRED
                bayes_threshold CDATA #REQUIRED
                elapsed_time CDATA #REQUIRED
                url CDATA ""
>
<!ELEMENT scores (alphabet_matrix)>
<!ELEMENT probabilities (alphabet_matrix)>
<!ELEMENT regular_expression (#PCDATA)*>

<!-- Contributing site elements -->
<!-- Contributing sites are motif occurences found during the motif discovery phase -->
<!ELEMENT contributing_sites (contributing_site*)>
<!ELEMENT contributing_site (left_flank, site, right_flank)>
<!ATTLIST contributing_site sequence_id IDREF #REQUIRED
                          position CDATA #REQUIRED
                          strand (plus|minus|none) 'none'
                          pvalue CDATA #REQUIRED
>
<!-- The left_flank contains the sequence for 10 bases to the left of the motif start -->
<!ELEMENT left_flank (#PCDATA)>
<!-- The site contains the sequence for the motif instance -->
<!ELEMENT site (letter_ref*)>
<!-- The right_flank contains the sequence for 10 bases to the right of the motif end -->
<!ELEMENT right_flank (#PCDATA)>

<!-- Scanned site elements -->
<!-- Scanned sites are motif occurences found during the sequence scan phase -->
<!ELEMENT scanned_sites_summary (scanned_sites*)>
<!ATTLIST scanned_sites_summary p_thresh CDATA #REQUIRED>
<!ELEMENT scanned_sites (scanned_site*)>
<!ATTLIST scanned_sites sequence_id IDREF #REQUIRED
                        pvalue CDATA #REQUIRED
                        num_sites CDATA #REQUIRED>
<!ELEMENT scanned_site EMPTY>
<!ATTLIST scanned_site  motif_id IDREF #REQUIRED
                        strand (plus|minus|none) 'none'
                        position CDATA #REQUIRED
                        pvalue CDATA #REQUIRED>

<!-- Utility elements -->
<!-- A reference to a letter in the alphabet -->
<!ELEMENT letter_ref EMPTY>
<!ATTLIST letter_ref letter_id IDREF #REQUIRED>
<!-- A alphabet-array contains one floating point value for each letter in an alphabet -->
<!ELEMENT alphabet_array (value*)>
<!ELEMENT value (#PCDATA)>
<!ATTLIST value letter_id IDREF #REQUIRED>

<!-- A alphabet_matrix contains one alphabet_array for each position in a motif -->
<!ELEMENT alphabet_matrix (alphabet_array*)>

]>
<!-- Begin document body -->
<MEME version="5.3.2" release="Fri Feb 5 17:50:07 2021 -0800">
<training_set primary_sequences="common/adh.s" primary_count="33" primary_positions="9996" control_sequences="Primary sequences shuffled preserving 3-mers" control_count="33" control_positions="9996">
<alphabet name="Protein" like="protein">
<letter id="A" symbol="A" name="Alanine" colour="0000CC"/>
<letter id="C" symbol="C" name="Cysteine" colour="0000CC"/>
<letter id="D" symbol="D" name="Aspartic acid" colour="FF00FF"/>
<letter id="E" symbol="E" name="Glutamic acid" colour="FF00FF"/>
<letter id="F" symbol="F" name="Phenylalanine" colour="0000CC"/>
<letter id="G" symbol="G" name="Glycine" colour="FFB300"/>
<letter id="H" symbol="H" name="Histidine" colour="FFCCCC"/>
<letter id="I" symbol="I" name="Isoleucine" colour="0000CC"/>
<letter id="K" symbol="K" name="Lysine" colour="CC0000"/>
<letter id="L" symbol="L" name="Leucine" colour="0000CC"/>
<letter id="M" symbol="M" name="Methionine" colour="0000CC"/>
<letter id="N" symbol="N" name="Asparagine" colour="008000"/>
<letter id="P" symbol="P" name="Proline" colour="FFFF00"/>
<letter id="Q" symbol="Q" name="Glutamine" colour="008000"/>
<letter id="R" symbol="R" name="Arginine" colour="CC0000"/>
<letter id="S" symbol="S" name="Serine" colour="008000"/>
<letter id="T" symbol="T" name="Threonine" colour="008000"/>
<letter id="V" symbol="V" name="Valine" colour="0000CC"/>
<letter id="W" symbol="W" name="Tryptophan" colour="0000CC"/>
<letter id="Y" symbol="Y" name="Tyrosine" colour="33E6CC"/>
<letter id="X" symbol="X" aliases="*." equals="ACDEFGHIKLMNPQRSTVWY" name="Any amino acid"/>
<letter id="B" symbol="B" equals="DN" name="Asparagine or Aspartic acid"/>
<letter id="Z" symbol="Z" equals="EQ" name="Glutamine or Glutamic acid"/>
<letter id="J" symbol="J" equals="IL" name="Leucine or Isoleucine"/>
</alphabet>
<sequence id="sequence_0" name="2BHD_STREX" length="255" weight="1.000000" />
<sequence id="sequence_1" name="3BHD_COMTE" length="253" weight="1.000000" />
<sequence id="sequence_2" name="ADH_DROME" length="255" weight="1.000000" />
<sequence id="sequence_3" name="AP27_MOUSE" length="244" weight="1.000000" />
<sequence id="sequence_4" name="BA72_EUBSP" length="249" weight="1.000000" />
<sequence id="sequence_5" name="BDH_HUMAN" length="343" weight="1.000000" />
<sequence id="sequence_6" name="BPHB_PSEPS" length="275" weight="1.000000" />
<sequence id="sequence_7" name="BUDC_KLETE" length="241" weight="1.000000" />
<sequence id="sequence_8" name="DHES_HUMAN" length="327" weight="1.000000" />
<sequence id="sequence_9" name="DHGB_BACME" length="262" weight="1.000000" />
<sequence id="sequence_10" name="DHII_HUMAN" length="292" weight="1.000000" />
<sequence id="sequence_11" name="DHMA_FLAS1" length="270" weight="1.000000" />
<sequence id="sequence_12" name="ENTA_ECOLI" length="248" weight="1.000000" />
<sequence id="sequence_13" name="FIXR_BRAJA" length="278" weight="1.000000" />
<sequence id="sequence_14" name="GUTD_ECOLI" length="259" weight="1.000000" />
<sequence id="sequence_15" name="HDE_CANTR" length="906" weight="1.000000" />
<sequence id="sequence_16" name="HDHA_ECOLI" length="255" weight="1.000000" />
<sequence id="sequence_17" name="LIGD_PSEPA" length="305" weight="1.000000" />
<sequence id="sequence_18" name="NODG_RHIME" length="245" weight="1.000000" />
<sequence id="sequence_19" name="RIDH_KLEAE" length="249" weight="1.000000" />
<sequence id="sequence_20" name="YINL_LISMO" length="248" weight="1.000000" />
<sequence id="sequence_21" name="YRTP_BACSU" length="238" weight="1.000000" />
<sequence id="sequence_22" name="CSGA_MYXXA" length="166" weight="1.000000" />
<sequence id="sequence_23" name="DHB2_HUMAN" length="387" weight="1.000000" />
<sequence id="sequence_24" name="DHB3_HUMAN" length="310" weight="1.000000" />
<sequence id="sequence_25" name="DHCA_HUMAN" length="276" weight="1.000000" />
<sequence id="sequence_26" name="FABI_ECOLI" length="262" weight="1.000000" />
<sequence id="sequence_27" name="FVT1_HUMAN" length="332" weight="1.000000" />
<sequence id="sequence_28" name="HMTR_LEIMA" length="287" weight="1.000000" />
<sequence id="sequence_29" name="MAS1_AGRRA" length="476" weight="1.000000" />
<sequence id="sequence_30" name="PCR_PEA" length="399" weight="1.000000" />
<sequence id="sequence_31" name="RFBB_NEIGO" length="346" weight="1.000000" />
<sequence id="sequence_32" name="YURA_MYXXA" length="258" weight="1.000000" />
<letter_frequencies>
<alphabet_array>
<value letter_id="A">0.111</value>
<value letter_id="C">0.0121</value>
<value letter_id="D">0.0502</value>
<value letter_id="E">0.0553</value>
<value letter_id="F">0.0359</value>
<value letter_id="G">0.0898</value>
<value letter_id="H">0.0182</value>
<value letter_id="I">0.0566</value>
<value letter_id="K">0.0518</value>
<value letter_id="L">0.0919</value>
<value letter_id="M">0.0272</value>
<value letter_id="N">0.0405</value>
<value letter_id="P">0.0405</value>
<value letter_id="Q">0.0294</value>
<value letter_id="R">0.0494</value>
<value letter_id="S">0.0637</value>
<value letter_id="T">0.0565</value>
<value letter_id="V">0.083</value>
<value letter_id="W">0.0095</value>
<value letter_id="Y">0.027</value>
</alphabet_array>
</letter_frequencies>
</training_set>
<model>
<command_line>meme common/adh.s -oc results/meme22 -mod oops -protein -nmotifs 2 -objfun de -w 12 -hsfrac 0.6 -shuf 3 -nostatus -mpi </command_line>
<host>Timothys-Mac-Mini.local</host>
<type>oops</type>
<nmotifs>2</nmotifs>
<evalue_threshold>inf</evalue_threshold>
<object_function>Differential Enrichment mHG</object_function>
<spfun>log likelihood ratio (LLR)</spfun>
<min_width>12</min_width>
<max_width>12</max_width>
<substring>yes</substring>
<minsites>33</minsites>
<maxsites>33</maxsites>
<wnsites>0.8</wnsites>
<spmap>pam</spmap>
<spfuzz>120</spfuzz>
<prior>dmix</prior>
<beta>0</beta>
<maxiter>50</maxiter>
<distance>1e-05</distance>
<num_positions>9996</num_positions>
<seed>0</seed>
<hsfrac>0.6</hsfrac>
<searchsize>9996</searchsize>
<maxsize>0</maxsize>
<norand>no</norand>
<strands>none</strands>
<brief>1000</brief>
<psp_file></psp_file>
<priors_file>prior30.plib</priors_file>
<reason_for_stopping>Stopped because requested number of motifs (2) found.</reason_for_stopping>
<background_frequencies source="--sequences--" order="0">
<alphabet_array>
<value letter_id="A">0.111</value>
<value letter_id="C">0.0122</value>
<value letter_id="D">0.0502</value>
<value letter_id="E">0.0553</value>
<value letter_id="F">0.0359</value>
<value letter_id="G">0.0898</value>
<value letter_id="H">0.0183</value>
<value letter_id="I">0.0566</value>
<value letter_id="K">0.0518</value>
<value letter_id="L">0.0919</value>
<value letter_id="M">0.0273</value>
<value letter_id="N">0.0405</value>
<value letter_id="P">0.0405</value>
<value letter_id="Q">0.0295</value>
<value letter_id="R">0.0494</value>
<value letter_id="S">0.0637</value>
<value letter_id="T">0.0565</value>
<value letter_id="V">0.083</value>
<value letter_id="W">0.00959</value>
<value letter_id="Y">0.0271</value>
</alphabet_array>
</background_frequencies>
</model>
<motifs>
<motif id="motif_1" name="EDLAGKNIRVTG" alt="MEME-1" width="12" sites="33" ic="22.4" re="19.5" llr="446" p_value="3.4e-001" e_value="3.4e-001" bayes_threshold="8.18427" elapsed_time="0.161957">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-268</value>
<value letter_id="C">-317</value>
<value letter_id="D">-207</value>
<value letter_id="E">137</value>
<value letter_id="F">-39</value>
<value letter_id="G">-68</value>
<value letter_id="H">75</value>
<value letter_id="I">-358</value>
<value letter_id="K">46</value>
<value letter_id="L">20</value>
<value letter_id="M">220</value>
<value letter_id="N">59</value>
<value letter_id="P">-296</value>
<value letter_id="Q">159</value>
<value letter_id="R">34</value>
<value letter_id="S">5</value>
<value letter_id="T">-59</value>
<value letter_id="V">-5</value>
<value letter_id="W">-331</value>
<value letter_id="Y">-279</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-75</value>
<value letter_id="C">-320</value>
<value letter_id="D">260</value>
<value letter_id="E">197</value>
<value letter_id="F">-40</value>
<value letter_id="G">-359</value>
<value letter_id="H">-151</value>
<value letter_id="I">-361</value>
<value letter_id="K">-15</value>
<value letter_id="L">-348</value>
<value letter_id="M">5</value>
<value letter_id="N">-171</value>
<value letter_id="P">41</value>
<value letter_id="Q">-92</value>
<value letter_id="R">81</value>
<value letter_id="S">-61</value>
<value letter_id="T">13</value>
<value letter_id="V">-354</value>
<value letter_id="W">-333</value>
<value letter_id="Y">-280</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-320</value>
<value letter_id="C">-195</value>
<value letter_id="D">-497</value>
<value letter_id="E">-95</value>
<value letter_id="F">124</value>
<value letter_id="G">-464</value>
<value letter_id="H">61</value>
<value letter_id="I">111</value>
<value letter_id="K">-386</value>
<value letter_id="L">199</value>
<value letter_id="M">-169</value>
<value letter_id="N">-376</value>
<value letter_id="P">-408</value>
<value letter_id="Q">-321</value>
<value letter_id="R">-76</value>
<value letter_id="S">-318</value>
<value letter_id="T">-251</value>
<value letter_id="V">86</value>
<value letter_id="W">-268</value>
<value letter_id="Y">230</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">76</value>
<value letter_id="C">-319</value>
<value letter_id="D">-47</value>
<value letter_id="E">-137</value>
<value letter_id="F">-356</value>
<value letter_id="G">98</value>
<value letter_id="H">-150</value>
<value letter_id="I">-97</value>
<value letter_id="K">148</value>
<value letter_id="L">-150</value>
<value letter_id="M">-280</value>
<value letter_id="N">-171</value>
<value letter_id="P">-46</value>
<value letter_id="Q">194</value>
<value letter_id="R">34</value>
<value letter_id="S">85</value>
<value letter_id="T">-209</value>
<value letter_id="V">-353</value>
<value letter_id="W">-332</value>
<value letter_id="Y">-279</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-141</value>
<value letter_id="C">-318</value>
<value letter_id="D">27</value>
<value letter_id="E">34</value>
<value letter_id="F">-355</value>
<value letter_id="G">133</value>
<value letter_id="H">-149</value>
<value letter_id="I">-97</value>
<value letter_id="K">46</value>
<value letter_id="L">-347</value>
<value letter_id="M">-280</value>
<value letter_id="N">-14</value>
<value letter_id="P">190</value>
<value letter_id="Q">44</value>
<value letter_id="R">-37</value>
<value letter_id="S">51</value>
<value letter_id="T">13</value>
<value letter_id="V">-140</value>
<value letter_id="W">140</value>
<value letter_id="Y">-279</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-275</value>
<value letter_id="C">-324</value>
<value letter_id="D">-214</value>
<value letter_id="E">-30</value>
<value letter_id="F">-362</value>
<value letter_id="G">-150</value>
<value letter_id="H">212</value>
<value letter_id="I">-365</value>
<value letter_id="K">308</value>
<value letter_id="L">-69</value>
<value letter_id="M">5</value>
<value letter_id="N">-16</value>
<value letter_id="P">-302</value>
<value letter_id="Q">43</value>
<value letter_id="R">-35</value>
<value letter_id="S">-192</value>
<value letter_id="T">61</value>
<value letter_id="V">-358</value>
<value letter_id="W">-336</value>
<value letter_id="Y">96</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">32</value>
<value letter_id="C">-325</value>
<value letter_id="D">-215</value>
<value letter_id="E">-30</value>
<value letter_id="F">-364</value>
<value letter_id="G">53</value>
<value letter_id="H">-155</value>
<value letter_id="I">-367</value>
<value letter_id="K">122</value>
<value letter_id="L">-353</value>
<value letter_id="M">-287</value>
<value letter_id="N">236</value>
<value letter_id="P">-303</value>
<value letter_id="Q">43</value>
<value letter_id="R">83</value>
<value letter_id="S">-193</value>
<value letter_id="T">-61</value>
<value letter_id="V">64</value>
<value letter_id="W">-337</value>
<value letter_id="Y">-286</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">63</value>
<value letter_id="C">-303</value>
<value letter_id="D">-641</value>
<value letter_id="E">-577</value>
<value letter_id="F">-367</value>
<value letter_id="G">-623</value>
<value letter_id="H">64</value>
<value letter_id="I">285</value>
<value letter_id="K">-550</value>
<value letter_id="L">-123</value>
<value letter_id="M">-295</value>
<value letter_id="N">-535</value>
<value letter_id="P">-563</value>
<value letter_id="Q">-495</value>
<value letter_id="R">-556</value>
<value letter_id="S">-484</value>
<value letter_id="T">-379</value>
<value letter_id="V">198</value>
<value letter_id="W">-447</value>
<value letter_id="Y">-426</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-153</value>
<value letter_id="C">-192</value>
<value letter_id="D">-493</value>
<value letter_id="E">-416</value>
<value letter_id="F">-11</value>
<value letter_id="G">-69</value>
<value letter_id="H">-301</value>
<value letter_id="I">182</value>
<value letter_id="K">-382</value>
<value letter_id="L">114</value>
<value letter_id="M">-170</value>
<value letter_id="N">-372</value>
<value letter_id="P">-406</value>
<value letter_id="Q">-318</value>
<value letter_id="R">209</value>
<value letter_id="S">-313</value>
<value letter_id="T">64</value>
<value letter_id="V">-186</value>
<value letter_id="W">305</value>
<value letter_id="Y">17</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-505</value>
<value letter_id="C">-354</value>
<value letter_id="D">-83</value>
<value letter_id="E">-682</value>
<value letter_id="F">-477</value>
<value letter_id="G">-757</value>
<value letter_id="H">-678</value>
<value letter_id="I">226</value>
<value letter_id="K">-681</value>
<value letter_id="L">-364</value>
<value letter_id="M">-387</value>
<value letter_id="N">-663</value>
<value letter_id="P">-665</value>
<value letter_id="Q">-665</value>
<value letter_id="R">-708</value>
<value letter_id="S">-643</value>
<value letter_id="T">-449</value>
<value letter_id="V">303</value>
<value letter_id="W">-662</value>
<value letter_id="Y">-599</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-392</value>
<value letter_id="C">-254</value>
<value letter_id="D">-416</value>
<value letter_id="E">-452</value>
<value letter_id="F">-435</value>
<value letter_id="G">-527</value>
<value letter_id="H">33</value>
<value letter_id="I">-349</value>
<value letter_id="K">-372</value>
<value letter_id="L">-464</value>
<value letter_id="M">-322</value>
<value letter_id="N">196</value>
<value letter_id="P">-437</value>
<value letter_id="Q">-25</value>
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<letter_ref letter_id="A"/>
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<right_flank>AVEKFGRIDG</right_flank>
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<contributing_site sequence_id="sequence_19" position="9" strand="none" pvalue="4.93e-06" >
<left_flank>MKHSVSSMN</left_flank>
<site>
<letter_ref letter_id="T"/>
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<letter_ref letter_id="A"/>
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<right_flank>AASGIGLECA</right_flank>
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<left_flank>GGVGLTQSLA</left_flank>
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<letter_ref letter_id="L"/>
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<letter_ref letter_id="E"/>
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<letter_ref letter_id="S"/>
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<right_flank>LMLGNLLKSP</right_flank>
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<left_flank>FVCAFSKALQ</left_flank>
<site>
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<letter_ref letter_id="A"/>
<letter_ref letter_id="K"/>
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<letter_ref letter_id="V"/>
<letter_ref letter_id="I"/>
<letter_ref letter_id="I"/>
<letter_ref letter_id="Q"/>
<letter_ref letter_id="V"/>
</site>
<right_flank>LTPYAVSTAM</right_flank>
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<left_flank>SRLLLEDLKK</left_flank>
<site>
<letter_ref letter_id="S"/>
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<letter_ref letter_id="S"/>
<letter_ref letter_id="K"/>
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<letter_ref letter_id="L"/>
<letter_ref letter_id="I"/>
<letter_ref letter_id="I"/>
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<site>
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<letter_ref letter_id="R"/>
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<letter_ref letter_id="R"/>
<letter_ref letter_id="V"/>
<letter_ref letter_id="L"/>
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<site>
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<right_flank>LSRIHARKLS</right_flank>
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<left_flank>AFATNVCTGP</left_flank>
<site>
<letter_ref letter_id="V"/>
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<letter_ref letter_id="N"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="V"/>
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<letter_ref letter_id="G"/>
</site>
<right_flank>LWCALGDVDY</right_flank>
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</contributing_sites>
</motif>
<motif id="motif_2" name="ASSGIGKATAKA" alt="MEME-2" width="12" sites="33" ic="25.3" re="20.0" llr="458" p_value="4.4e-003" e_value="4.4e-003" bayes_threshold="8.18427" elapsed_time="0.285944">
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<value letter_id="R">-619</value>
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<value letter_id="V">-513</value>
<value letter_id="W">-598</value>
<value letter_id="Y">-643</value>
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<value letter_id="D">35</value>
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<value letter_id="I">-429</value>
<value letter_id="K">36</value>
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<value letter_id="M">-353</value>
<value letter_id="N">117</value>
<value letter_id="P">-349</value>
<value letter_id="Q">-153</value>
<value letter_id="R">-248</value>
<value letter_id="S">180</value>
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<value letter_id="V">-422</value>
<value letter_id="W">-396</value>
<value letter_id="Y">-335</value>
</alphabet_array>
<alphabet_array>
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<value letter_id="F">-356</value>
<value letter_id="G">22</value>
<value letter_id="H">159</value>
<value letter_id="I">-360</value>
<value letter_id="K">121</value>
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<value letter_id="P">-295</value>
<value letter_id="Q">44</value>
<value letter_id="R">145</value>
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<value letter_id="T">-59</value>
<value letter_id="V">-353</value>
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<value letter_id="Y">-279</value>
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<alphabet_array>
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<value letter_id="F">-111</value>
<value letter_id="G">323</value>
<value letter_id="H">-342</value>
<value letter_id="I">-506</value>
<value letter_id="K">-361</value>
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<value letter_id="T">-160</value>
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<value letter_id="Y">-431</value>
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<alphabet_array>
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<value letter_id="I">353</value>
<value letter_id="K">-354</value>
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<value letter_id="P">-431</value>
<value letter_id="Q">-339</value>
<value letter_id="R">-397</value>
<value letter_id="S">-224</value>
<value letter_id="T">-277</value>
<value letter_id="V">63</value>
<value letter_id="W">-317</value>
<value letter_id="Y">-285</value>
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<alphabet_array>
<value letter_id="A">-198</value>
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<value letter_id="F">-504</value>
<value letter_id="G">336</value>
<value letter_id="H">-361</value>
<value letter_id="I">-524</value>
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<value letter_id="Q">-394</value>
<value letter_id="R">-385</value>
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<value letter_id="T">-423</value>
<value letter_id="V">-506</value>
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<value letter_id="Y">-450</value>
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<alphabet_array>
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<value letter_id="E">-175</value>
<value letter_id="F">113</value>
<value letter_id="G">-15</value>
<value letter_id="H">160</value>
<value letter_id="I">-332</value>
<value letter_id="K">209</value>
<value letter_id="L">79</value>
<value letter_id="M">-279</value>
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<value letter_id="P">-326</value>
<value letter_id="Q">-119</value>
<value letter_id="R">149</value>
<value letter_id="S">-71</value>
<value letter_id="T">-234</value>
<value letter_id="V">-338</value>
<value letter_id="W">-333</value>
<value letter_id="Y">195</value>
</alphabet_array>
<alphabet_array>
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<value letter_id="K">-384</value>
<value letter_id="L">45</value>
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<value letter_id="Q">-2</value>
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<value letter_id="T">211</value>
<value letter_id="V">28</value>
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<value letter_id="Y">160</value>
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<alphabet_array>
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<value letter_id="F">-360</value>
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<value letter_id="H">-363</value>
<value letter_id="I">-346</value>
<value letter_id="K">-384</value>
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<value letter_id="M">-300</value>
<value letter_id="N">-95</value>
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<value letter_id="Q">-348</value>
<value letter_id="R">-387</value>
<value letter_id="S">-6</value>
<value letter_id="T">-262</value>
<value letter_id="V">59</value>
<value letter_id="W">-348</value>
<value letter_id="Y">-398</value>
</alphabet_array>
<alphabet_array>
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<value letter_id="C">-304</value>
<value letter_id="D">-50</value>
<value letter_id="E">31</value>
<value letter_id="F">-37</value>
<value letter_id="G">-364</value>
<value letter_id="H">-158</value>
<value letter_id="I">48</value>
<value letter_id="K">248</value>
<value letter_id="L">52</value>
<value letter_id="M">-268</value>
<value letter_id="N">-180</value>
<value letter_id="P">-302</value>
<value letter_id="Q">41</value>
<value letter_id="R">145</value>
<value letter_id="S">-193</value>
<value letter_id="T">-212</value>
<value letter_id="V">-134</value>
<value letter_id="W">-326</value>
<value letter_id="Y">96</value>
</alphabet_array>
<alphabet_array>
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<value letter_id="D">26</value>
<value letter_id="E">76</value>
<value letter_id="F">-39</value>
<value letter_id="G">-359</value>
<value letter_id="H">250</value>
<value letter_id="I">-95</value>
<value letter_id="K">-16</value>
<value letter_id="L">-17</value>
<value letter_id="M">-275</value>
<value letter_id="N">-173</value>
<value letter_id="P">-297</value>
<value letter_id="Q">43</value>
<value letter_id="R">145</value>
<value letter_id="S">-187</value>
<value letter_id="T">13</value>
<value letter_id="V">-56</value>
<value letter_id="W">140</value>
<value letter_id="Y">6</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
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</alphabet_array>
<alphabet_array>
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</alphabet_array>
<alphabet_array>
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<value letter_id="P">0.000000</value>
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</alphabet_array>
<alphabet_array>
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<alphabet_array>
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</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[AG][ASG]SGIGKA[TI]AKX
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_13" position="43" strand="none" pvalue="7.38e-11" >
<left_flank>GEPKVMLLTG</left_flank>
<site>
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<letter_ref letter_id="R"/>
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<letter_ref letter_id="A"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="A"/>
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<letter_ref letter_id="L"/>
</site>
<right_flank>FSEAGWRIIS</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_20" position="12" strand="none" pvalue="3.40e-10" >
<left_flank>IKNKVIIITG</left_flank>
<site>
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<letter_ref letter_id="S"/>
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<letter_ref letter_id="L"/>
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<right_flank>LAEKGAKLVL</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_10" position="41" strand="none" pvalue="6.82e-10" >
<left_flank>LQGKKVIVTG</left_flank>
<site>
<letter_ref letter_id="A"/>
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<letter_ref letter_id="E"/>
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<letter_ref letter_id="A"/>
<letter_ref letter_id="Y"/>
<letter_ref letter_id="H"/>
</site>
<right_flank>LAKMGAHVVV</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_12" position="12" strand="none" pvalue="1.01e-09" >
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<site>
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<letter_ref letter_id="L"/>
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</site>
<right_flank>FVEAGAKVTG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="9" strand="none" pvalue="1.01e-09" >
<left_flank>MQKVALVTG</left_flank>
<site>
<letter_ref letter_id="A"/>
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<right_flank>LVKDGFAVAI</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_27" position="39" strand="none" pvalue="1.14e-09" >
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<site>
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<letter_ref letter_id="S"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="I"/>
<letter_ref letter_id="G"/>
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<letter_ref letter_id="E"/>
</site>
<right_flank>CYKQGAFITL</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_21" position="13" strand="none" pvalue="1.30e-09" >
<left_flank>LQHKTALITG</left_flank>
<site>
<letter_ref letter_id="G"/>
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<letter_ref letter_id="A"/>
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<right_flank>LAKEGVNIGL</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_30" position="93" strand="none" pvalue="4.19e-09" >
<left_flank>LRKGNVVITG</left_flank>
<site>
<letter_ref letter_id="A"/>
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<letter_ref letter_id="S"/>
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<letter_ref letter_id="G"/>
<letter_ref letter_id="L"/>
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<right_flank>LAESGKWHVI</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_19" position="21" strand="none" pvalue="1.20e-08" >
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<site>
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<right_flank>LLGAGAKVVL</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_25" position="11" strand="none" pvalue="2.15e-08" >
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<site>
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<site>
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<right_flank>LHASGAKVVA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_16" position="18" strand="none" pvalue="3.75e-08" >
<left_flank>LDGKCAIITG</left_flank>
<site>
<letter_ref letter_id="A"/>
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<letter_ref letter_id="A"/>
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</site>
<right_flank>FATAGASVVV</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_15" position="329" strand="none" pvalue="4.90e-08" >
<left_flank>LKDKVVLITG</left_flank>
<site>
<letter_ref letter_id="A"/>
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<letter_ref letter_id="A"/>
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</site>
<right_flank>FAKYGAKVVV</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_11" position="21" strand="none" pvalue="4.90e-08" >
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<site>
<letter_ref letter_id="A"/>
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<letter_ref letter_id="A"/>
</site>
<right_flank>YLREGASVVA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_29" position="252" strand="none" pvalue="6.94e-08" >
<left_flank>HQSPVILVSG</left_flank>
<site>
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<right_flank>LIAHGYRLSL</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_8" position="9" strand="none" pvalue="6.94e-08" >
<left_flank>ARTVVLITG</left_flank>
<site>
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<right_flank>LASDPSQSFK</right_flank>
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<site>
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<letter_ref letter_id="A"/>
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<site>
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<site>
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<contributing_site sequence_id="sequence_23" position="89" strand="none" pvalue="2.18e-07" >
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<site>
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<letter_ref letter_id="D"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
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<letter_ref letter_id="G"/>
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<site>
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<letter_ref letter_id="A"/>
<letter_ref letter_id="S"/>
<letter_ref letter_id="G"/>
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<letter_ref letter_id="G"/>
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<contributing_site sequence_id="sequence_2" position="13" strand="none" pvalue="6.26e-07" >
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<site>
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<letter_ref letter_id="L"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="I"/>
<letter_ref letter_id="G"/>
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<letter_ref letter_id="T"/>
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<letter_ref letter_id="E"/>
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<right_flank>LLKRDLKNLV</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_18" position="13" strand="none" pvalue="8.34e-07" >
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<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="S"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="I"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="I"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="R"/>
<letter_ref letter_id="V"/>
</site>
<right_flank>LHAQGAIVGL</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_9" position="14" strand="none" pvalue="8.34e-07" >
<left_flank>LEGKVVVITG</left_flank>
<site>
<letter_ref letter_id="S"/>
<letter_ref letter_id="S"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="L"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="K"/>
<letter_ref letter_id="S"/>
<letter_ref letter_id="M"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="I"/>
<letter_ref letter_id="R"/>
</site>
<right_flank>FATEKAKVVV</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_1" position="13" strand="none" pvalue="8.34e-07" >
<left_flank>LQGKVALVTG</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="S"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="V"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="L"/>
<letter_ref letter_id="E"/>
<letter_ref letter_id="V"/>
<letter_ref letter_id="V"/>
<letter_ref letter_id="K"/>
<letter_ref letter_id="L"/>
</site>
<right_flank>LLGEGAKVAF</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_31" position="13" strand="none" pvalue="2.33e-06" >
<left_flank>EGKKNILVTG</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="F"/>
<letter_ref letter_id="I"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="S"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="V"/>
<letter_ref letter_id="V"/>
<letter_ref letter_id="R"/>
<letter_ref letter_id="H"/>
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<right_flank>IIQNTRDSVV</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_0" position="13" strand="none" pvalue="3.22e-06" >
<left_flank>LSGKTVIITG</left_flank>
<site>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="R"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="L"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="E"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="R"/>
<letter_ref letter_id="Q"/>
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<right_flank>AVAAGARVVL</right_flank>
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<contributing_site sequence_id="sequence_17" position="13" strand="none" pvalue="8.71e-06" >
<left_flank>FQDQVAFITG</left_flank>
<site>
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<letter_ref letter_id="A"/>
<letter_ref letter_id="S"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
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<letter_ref letter_id="G"/>
<letter_ref letter_id="Q"/>
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<letter_ref letter_id="K"/>
<letter_ref letter_id="V"/>
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<right_flank>FGQAGAKIVV</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_28" position="24" strand="none" pvalue="1.86e-05" >
<left_flank>AKRLGRSIAE</left_flank>
<site>
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<letter_ref letter_id="L"/>
<letter_ref letter_id="H"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="E"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="Y"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="V"/>
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<letter_ref letter_id="H"/>
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<right_flank>YHRSAAEANA</right_flank>
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<contributing_site sequence_id="sequence_22" position="77" strand="none" pvalue="2.91e-05" >
<left_flank>AHVTSRMGSL</left_flank>
<site>
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<letter_ref letter_id="A"/>
<letter_ref letter_id="N"/>
<letter_ref letter_id="T"/>
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<letter_ref letter_id="G"/>
<letter_ref letter_id="G"/>
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<letter_ref letter_id="A"/>
<letter_ref letter_id="Y"/>
<letter_ref letter_id="R"/>
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<site>
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<site>
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<letter_ref letter_id="T"/>
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<site>
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<scanned_site motif_id="motif_1" strand="none" position="170" pvalue="5.00e-07"/>
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</scanned_sites>
</scanned_sites_summary>
</MEME>
