chr21	ENSEMBL	transcript	9683191	9683272	.	+	.	gene_id "ENSG00000238411.1"; transcript_id "ENST00000459169.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "CR381670.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "CR381670.1-201"; level 3;
chr21	ENSEMBL	transcript	9907190	9968548	.	-	.	gene_id "ENSG00000188681.6"; transcript_id "ENST00000400754.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MAFIP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MAFIP-201"; level 3;
chr21	ENSEMBL	transcript	9907194	9968585	.	-	.	gene_id "ENSG00000227328.2"; transcript_id "ENST00000416067.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CR392039.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CR392039.1-201"; level 3;
chr21	ENSEMBL	transcript	9937696	9937777	.	-	.	gene_id "ENSG00000239179.1"; transcript_id "ENST00000458847.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "CR392039.3"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "CR392039.3-201"; level 3;
chr21	ENSEMBL	transcript	9937936	9938018	.	-	.	gene_id "ENSG00000239107.1"; transcript_id "ENST00000459307.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "CR392039.2"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "CR392039.2-201"; level 3;
chr21	ENSEMBL	transcript	10181168	10182885	.	+	.	gene_id "ENSG00000236557.1"; transcript_id "ENST00000422356.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CR381653.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CR381653.1-201"; level 3;
chr21	ENSEMBL	transcript	10385953	10386047	.	+	.	gene_id "ENSG00000252199.1"; transcript_id "ENST00000516390.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA70.20"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA70.20-201"; level 3;
chr21	HAVANA	transcript	10862622	10863057	.	+	.	gene_id "ENSG00000169861.7"; transcript_id "ENST00000302092.5"; gene_type "IG_V_gene"; gene_status "KNOWN"; gene_name "IGHV1OR21-1"; transcript_type "IG_V_gene"; transcript_status "KNOWN"; transcript_name "IGHV1OR21-1-001"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074130.2"; havana_transcript "OTTHUMT00000157419.2";
chr21	HAVANA	transcript	10872119	10872429	.	+	.	gene_id "ENSG00000235476.1"; transcript_id "ENST00000411878.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AF254982.2"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AF254982.2-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000074126.1"; havana_transcript "OTTHUMT00000157411.1";
chr21	HAVANA	transcript	10899082	10900005	.	+	.	gene_id "ENSG00000223925.1"; transcript_id "ENST00000456889.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AF254982.3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AF254982.3-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000074131.1"; havana_transcript "OTTHUMT00000157420.1";
chr21	HAVANA	transcript	10906201	10990920	.	-	.	gene_id "ENSG00000166157.11"; transcript_id "ENST00000298232.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TPTE"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TPTE-001"; level 2; tag "CCDS"; ccdsid "CCDS33512.1"; havana_gene "OTTHUMG00000074127.5"; havana_transcript "OTTHUMT00000157412.2";
chr21	HAVANA	transcript	10906741	10990882	.	-	.	gene_id "ENSG00000166157.11"; transcript_id "ENST00000361285.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TPTE"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TPTE-002"; level 2; tag "CCDS"; ccdsid "CCDS13560.2"; havana_gene "OTTHUMG00000074127.5"; havana_transcript "OTTHUMT00000157413.1";
chr21	HAVANA	transcript	10906741	10990882	.	-	.	gene_id "ENSG00000166157.11"; transcript_id "ENST00000342420.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TPTE"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TPTE-003"; level 2; tag "CCDS"; ccdsid "CCDS33511.1"; havana_gene "OTTHUMG00000074127.5"; havana_transcript "OTTHUMT00000157414.1";
chr21	HAVANA	transcript	10906741	10990882	.	-	.	gene_id "ENSG00000166157.11"; transcript_id "ENST00000447568.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TPTE"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TPTE-004"; level 2; havana_gene "OTTHUMG00000074127.5"; havana_transcript "OTTHUMT00000157415.1";
chr21	HAVANA	transcript	10906741	11029719	.	-	.	gene_id "ENSG00000166157.11"; transcript_id "ENST00000415664.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TPTE"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TPTE-006"; level 2; havana_gene "OTTHUMG00000074127.5"; havana_transcript "OTTHUMT00000340030.1";
chr21	HAVANA	transcript	10906941	10970064	.	-	.	gene_id "ENSG00000166157.11"; transcript_id "ENST00000341326.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TPTE"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TPTE-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000074127.5"; havana_transcript "OTTHUMT00000340031.1";
chr21	HAVANA	transcript	10951266	10990883	.	-	.	gene_id "ENSG00000166157.11"; transcript_id "ENST00000328758.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TPTE"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TPTE-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074127.5"; havana_transcript "OTTHUMT00000157416.4";
chr21	HAVANA	transcript	10935976	10936167	.	-	.	gene_id "ENSG00000227691.1"; transcript_id "ENST00000451532.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CYCSP41"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "CYCSP41-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074132.1"; havana_transcript "OTTHUMT00000157421.1";
chr21	HAVANA	transcript	10996026	11058323	.	-	.	gene_id "ENSG00000187172.10"; transcript_id "ENST00000496773.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BAGE2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "BAGE2-002"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000074128.5"; havana_transcript "OTTHUMT00000157418.1";
chr21	HAVANA	transcript	11020842	11098925	.	-	.	gene_id "ENSG00000187172.10"; transcript_id "ENST00000470054.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BAGE2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BAGE2-001"; level 2; havana_gene "OTTHUMG00000074128.5"; havana_transcript "OTTHUMT00000157417.3";
chr21	HAVANA	transcript	11059928	11098980	.	-	.	gene_id "ENSG00000187172.10"; transcript_id "ENST00000474011.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BAGE2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BAGE2-003"; level 2; havana_gene "OTTHUMG00000074128.5"; havana_transcript "OTTHUMT00000340032.2";
chr21	ENSEMBL	transcript	11096557	11098697	.	-	.	gene_id "ENSG00000187172.10"; transcript_id "ENST00000539456.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BAGE2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BAGE2-201"; level 3; havana_gene "OTTHUMG00000074128.5";
chr21	HAVANA	transcript	11153837	11155057	.	-	.	gene_id "ENSG00000231962.1"; transcript_id "ENST00000414133.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VN1R7P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "VN1R7P-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000074133.1"; havana_transcript "OTTHUMT00000157422.1";
chr21	HAVANA	transcript	11180920	11181815	.	-	.	gene_id "ENSG00000234643.1"; transcript_id "ENST00000414503.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "EIF3FP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "EIF3FP1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074145.1"; havana_transcript "OTTHUMT00000157500.1";
chr21	HAVANA	transcript	14371997	14389013	.	-	.	gene_id "ENSG00000229306.1"; transcript_id "ENST00000457565.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001464.4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001464.4-001"; level 2; havana_gene "OTTHUMG00000074167.1"; havana_transcript "OTTHUMT00000157562.1";
chr21	HAVANA	transcript	14410481	14424439	.	+	.	gene_id "ENSG00000224309.3"; transcript_id "ENST00000447861.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD30BP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ANKRD30BP2-003"; level 2; havana_gene "OTTHUMG00000074164.3"; havana_transcript "OTTHUMT00000157561.1";
chr21	HAVANA	transcript	14410529	14439354	.	+	.	gene_id "ENSG00000224309.3"; transcript_id "ENST00000435744.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD30BP2"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ANKRD30BP2-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000074164.3"; havana_transcript "OTTHUMT00000157558.1";
chr21	HAVANA	transcript	14410651	14418742	.	+	.	gene_id "ENSG00000224309.3"; transcript_id "ENST00000507941.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD30BP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD30BP2-004"; level 2; havana_gene "OTTHUMG00000074164.3"; havana_transcript "OTTHUMT00000372094.1";
chr21	HAVANA	transcript	14415105	14424439	.	+	.	gene_id "ENSG00000224309.3"; transcript_id "ENST00000471407.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD30BP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ANKRD30BP2-002"; level 2; havana_gene "OTTHUMG00000074164.3"; havana_transcript "OTTHUMT00000157560.1";
chr21	ENSEMBL	transcript	14419904	14420010	.	+	.	gene_id "ENSG00000207097.1"; transcript_id "ENST00000384369.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.581"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.581-201"; level 3;
chr21	HAVANA	transcript	14467626	14486111	.	-	.	gene_id "ENSG00000168122.4"; transcript_id "ENST00000427301.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZNF355P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZNF355P-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000074165.1"; havana_transcript "OTTHUMT00000157559.1";
chr21	HAVANA	transcript	14492565	14493128	.	+	.	gene_id "ENSG00000237202.1"; transcript_id "ENST00000424255.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AJ239321.3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AJ239321.3-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155589.1"; havana_transcript "OTTHUMT00000340798.1";
chr21	HAVANA	transcript	14721586	14722969	.	+	.	gene_id "ENSG00000185390.2"; transcript_id "ENST00000332473.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FGF7P2"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "FGF7P2-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000074196.1"; havana_transcript "OTTHUMT00000157659.1";
chr21	ENSEMBL	transcript	14741931	14745386	.	-	.	gene_id "ENSG00000256715.1"; transcript_id "ENST00000540061.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BAGE4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BAGE4-201"; level 3;
chr21	HAVANA	transcript	14756570	14800094	.	-	.	gene_id "ENSG00000175302.4"; transcript_id "ENST00000451052.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD30BP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ANKRD30BP1-001"; level 1; ont "PGO:0000005"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074201.1"; havana_transcript "OTTHUMT00000157664.1";
chr21	ENSEMBL	transcript	14756570	14760261	.	-	.	gene_id "ENSG00000175302.4"; transcript_id "ENST00000309142.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ANKRD30BP1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ANKRD30BP1-201"; level 1; havana_gene "OTTHUMG00000074201.1";
chr21	HAVANA	transcript	14815694	14861497	.	-	.	gene_id "ENSG00000226930.1"; transcript_id "ENST00000424290.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GTF2IP2"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "GTF2IP2-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000074198.1"; havana_transcript "OTTHUMT00000157661.1";
chr21	HAVANA	transcript	14848692	14849584	.	+	.	gene_id "ENSG00000219280.1"; transcript_id "ENST00000407739.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VN1R8P"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "VN1R8P-001"; level 2; havana_gene "OTTHUMG00000074205.1"; havana_transcript "OTTHUMT00000157668.1";
chr21	HAVANA	transcript	14897920	14900900	.	+	.	gene_id "ENSG00000228184.1"; transcript_id "ENST00000444901.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SNX19P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "SNX19P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074199.1"; havana_transcript "OTTHUMT00000157662.1";
chr21	HAVANA	transcript	14916603	14917506	.	-	.	gene_id "ENSG00000179381.7"; transcript_id "ENST00000431829.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "OR4K11P"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "OR4K11P-001"; level 2; havana_gene "OTTHUMG00000074202.1"; havana_transcript "OTTHUMT00000157665.1";
chr21	HAVANA	transcript	14918354	14930782	.	+	.	gene_id "ENSG00000228159.1"; transcript_id "ENST00000427446.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001465.5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001465.5-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000074207.1"; havana_transcript "OTTHUMT00000157670.1";
chr21	HAVANA	transcript	14953365	14954325	.	-	.	gene_id "ENSG00000218549.1"; transcript_id "ENST00000406538.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "OR4K12P"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "OR4K12P-001"; level 2; havana_gene "OTTHUMG00000074203.1"; havana_transcript "OTTHUMT00000157666.1";
chr21	HAVANA	transcript	14982498	15013906	.	+	.	gene_id "ENSG00000166351.6"; transcript_id "ENST00000299443.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POTED"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POTED-001"; level 2; tag "CCDS"; ccdsid "CCDS13562.1"; havana_gene "OTTHUMG00000074197.1"; havana_transcript "OTTHUMT00000157660.1";
chr21	ENSEMBL	transcript	14993898	14994004	.	+	.	gene_id "ENSG00000207476.1"; transcript_id "ENST00000384745.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.716"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.716-201"; level 3;
chr21	HAVANA	transcript	15038189	15039867	.	-	.	gene_id "ENSG00000227874.1"; transcript_id "ENST00000435181.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AL050303.9"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AL050303.9-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155592.1"; havana_transcript "OTTHUMT00000340804.1";
chr21	HAVANA	transcript	15048343	15049437	.	+	.	gene_id "ENSG00000214319.2"; transcript_id "ENST00000398098.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AL050303.5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AL050303.5-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000074204.1"; havana_transcript "OTTHUMT00000157667.1";
chr21	HAVANA	transcript	15134659	15136653	.	+	.	gene_id "ENSG00000229231.1"; transcript_id "ENST00000431297.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FEM1DP"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "FEM1DP-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074206.1"; havana_transcript "OTTHUMT00000157669.1";
chr21	HAVANA	transcript	15142253	15144061	.	+	.	gene_id "ENSG00000224922.1"; transcript_id "ENST00000444356.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AL050303.7"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AL050303.7-001"; level 2; havana_gene "OTTHUMG00000074200.1"; havana_transcript "OTTHUMT00000157663.1";
chr21	HAVANA	transcript	15148407	15149587	.	+	.	gene_id "ENSG00000173231.6"; transcript_id "ENST00000311003.6"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TERF1P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "TERF1P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074234.1"; havana_transcript "OTTHUMT00000157745.1";
chr21	HAVANA	transcript	15164956	15165462	.	+	.	gene_id "ENSG00000232797.1"; transcript_id "ENST00000443486.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AL109748.4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AL109748.4-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074236.1"; havana_transcript "OTTHUMT00000157748.1";
chr21	HAVANA	transcript	15196727	15197956	.	-	.	gene_id "ENSG00000224860.1"; transcript_id "ENST00000433312.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AL109748.5"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AL109748.5-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074230.1"; havana_transcript "OTTHUMT00000157741.1";
chr21	HAVANA	transcript	15199017	15199948	.	+	.	gene_id "ENSG00000215562.2"; transcript_id "ENST00000400583.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CNN2P7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "CNN2P7-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074231.1"; havana_transcript "OTTHUMT00000157742.1";
chr21	HAVANA	transcript	15211439	15211730	.	+	.	gene_id "ENSG00000234538.1"; transcript_id "ENST00000453500.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AL109748.17"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AL109748.17-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000155503.1"; havana_transcript "OTTHUMT00000340403.1";
chr21	HAVANA	transcript	15215454	15220685	.	-	.	gene_id "ENSG00000228314.1"; transcript_id "ENST00000428301.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CYP4F3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CYP4F3-003"; level 2; havana_gene "OTTHUMG00000074229.2"; havana_transcript "OTTHUMT00000157746.1";
chr21	HAVANA	transcript	15219080	15220034	.	-	.	gene_id "ENSG00000228314.1"; transcript_id "ENST00000420685.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CYP4F3"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "CYP4F3-001"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000074229.2"; havana_transcript "OTTHUMT00000157740.1";
chr21	HAVANA	transcript	15219080	15220526	.	-	.	gene_id "ENSG00000228314.1"; transcript_id "ENST00000436765.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CYP4F3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CYP4F3-002"; level 2; havana_gene "OTTHUMG00000074229.2"; havana_transcript "OTTHUMT00000157747.1";
chr21	HAVANA	transcript	15278281	15278809	.	-	.	gene_id "ENSG00000230965.1"; transcript_id "ENST00000412442.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001466.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001466.7-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000155490.1"; havana_transcript "OTTHUMT00000340307.1";
chr21	HAVANA	transcript	15281895	15307976	.	-	.	gene_id "ENSG00000215559.4"; transcript_id "ENST00000442192.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001466.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001466.6-001"; level 2; havana_gene "OTTHUMG00000074237.2"; havana_transcript "OTTHUMT00000157749.1";
chr21	HAVANA	transcript	15281895	15352232	.	-	.	gene_id "ENSG00000215559.4"; transcript_id "ENST00000451663.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001466.6"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001466.6-006"; level 1; ont "PGO:0000005"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074237.2"; havana_transcript "OTTHUMT00000157754.1";
chr21	HAVANA	transcript	15310267	15342324	.	-	.	gene_id "ENSG00000215559.4"; transcript_id "ENST00000428576.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001466.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001466.6-003"; level 2; havana_gene "OTTHUMG00000074237.2"; havana_transcript "OTTHUMT00000157752.1";
chr21	HAVANA	transcript	15311695	15335106	.	-	.	gene_id "ENSG00000215559.4"; transcript_id "ENST00000432875.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001466.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001466.6-004"; level 2; havana_gene "OTTHUMG00000074237.2"; havana_transcript "OTTHUMT00000157753.1";
chr21	HAVANA	transcript	15316065	15344450	.	-	.	gene_id "ENSG00000215559.4"; transcript_id "ENST00000429521.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001466.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001466.6-002"; level 2; havana_gene "OTTHUMG00000074237.2"; havana_transcript "OTTHUMT00000157751.1";
chr21	HAVANA	transcript	15316090	15352758	.	-	.	gene_id "ENSG00000215559.4"; transcript_id "ENST00000344693.5"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001466.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001466.6-005"; level 2; havana_gene "OTTHUMG00000074237.2"; havana_transcript "OTTHUMT00000157750.1";
chr21	HAVANA	transcript	15309314	15309646	.	-	.	gene_id "ENSG00000203616.2"; transcript_id "ENST00000366423.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RHOT1P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RHOT1P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155588.1"; havana_transcript "OTTHUMT00000340797.1";
chr21	ENSEMBL	transcript	15340810	15340916	.	-	.	gene_id "ENSG00000223287.1"; transcript_id "ENST00000411355.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.934"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.934-201"; level 3;
chr21	HAVANA	transcript	15373248	15377600	.	+	.	gene_id "ENSG00000183249.6"; transcript_id "ENST00000457709.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NF1P3"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NF1P3-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000074232.1"; havana_transcript "OTTHUMT00000157743.1";
chr21	HAVANA	transcript	15379455	15387201	.	+	.	gene_id "ENSG00000233442.2"; transcript_id "ENST00000450880.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001634.5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001634.5-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000074233.1"; havana_transcript "OTTHUMT00000157744.1";
chr21	HAVANA	transcript	15399742	15516789	.	+	.	gene_id "ENSG00000224905.2"; transcript_id "ENST00000432621.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001347.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001347.6-002"; level 2; havana_gene "OTTHUMG00000074260.1"; havana_transcript "OTTHUMT00000157813.1";
chr21	HAVANA	transcript	15399742	15516789	.	+	.	gene_id "ENSG00000224905.2"; transcript_id "ENST00000428809.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001347.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001347.6-001"; level 2; havana_gene "OTTHUMG00000074260.1"; havana_transcript "OTTHUMT00000157812.1";
chr21	HAVANA	transcript	15399772	15461367	.	+	.	gene_id "ENSG00000224905.2"; transcript_id "ENST00000448463.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001347.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001347.6-003"; level 2; havana_gene "OTTHUMG00000074260.1"; havana_transcript "OTTHUMT00000157814.1";
chr21	HAVANA	transcript	15436646	15441408	.	+	.	gene_id "ENSG00000249493.1"; transcript_id "ENST00000359341.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001347.5"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001347.5-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000074259.1"; havana_transcript "OTTHUMT00000157811.1";
chr21	ENSEMBL	transcript	15443192	15443307	.	+	.	gene_id "ENSG00000201812.1"; transcript_id "ENST00000364942.1"; gene_type "rRNA"; gene_status "NOVEL"; gene_name "5S_rRNA.159"; transcript_type "rRNA"; transcript_status "NOVEL"; transcript_name "5S_rRNA.159-201"; level 3;
chr21	ENSEMBL	transcript	15456966	15457502	.	-	.	gene_id "ENSG00000241115.1"; transcript_id "ENST00000479623.1"; gene_type "rRNA_pseudogene"; gene_status "NOVEL"; gene_name "AP001347.1"; transcript_type "rRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AP001347.1-201"; level 3;
chr21	HAVANA	transcript	15481134	15579270	.	-	.	gene_id "ENSG00000188992.6"; transcript_id "ENST00000344577.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LIPI"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LIPI-001"; level 2; tag "CCDS"; ccdsid "CCDS13564.1"; havana_gene "OTTHUMG00000074258.2"; havana_transcript "OTTHUMT00000157810.2";
chr21	ENSEMBL	transcript	15481134	15583166	.	-	.	gene_id "ENSG00000188992.6"; transcript_id "ENST00000536861.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LIPI"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LIPI-202"; level 3; havana_gene "OTTHUMG00000074258.2";
chr21	ENSEMBL	transcript	15481134	15579254	.	-	.	gene_id "ENSG00000188992.6"; transcript_id "ENST00000382981.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LIPI"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LIPI-201"; level 3; havana_gene "OTTHUMG00000074258.2";
chr21	HAVANA	transcript	15537572	15561424	.	-	.	gene_id "ENSG00000188992.6"; transcript_id "ENST00000400211.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LIPI"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LIPI-002"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074258.2"; havana_transcript "OTTHUMT00000259009.1";
chr21	HAVANA	transcript	15515902	15516479	.	+	.	gene_id "ENSG00000240755.1"; transcript_id "ENST00000433806.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ERLEC1P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ERLEC1P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155493.1"; havana_transcript "OTTHUMT00000340354.1";
chr21	HAVANA	transcript	15588451	15600693	.	+	.	gene_id "ENSG00000185272.9"; transcript_id "ENST00000468643.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RBM11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RBM11-002"; level 2; havana_gene "OTTHUMG00000074263.1"; havana_transcript "OTTHUMT00000157819.1";
chr21	HAVANA	transcript	15588466	15599375	.	+	.	gene_id "ENSG00000185272.9"; transcript_id "ENST00000468788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RBM11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RBM11-004"; level 2; havana_gene "OTTHUMG00000074263.1"; havana_transcript "OTTHUMT00000157821.1";
chr21	HAVANA	transcript	15588474	15600494	.	+	.	gene_id "ENSG00000185272.9"; transcript_id "ENST00000495055.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RBM11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RBM11-003"; level 2; havana_gene "OTTHUMG00000074263.1"; havana_transcript "OTTHUMT00000157820.1";
chr21	HAVANA	transcript	15588475	15593774	.	+	.	gene_id "ENSG00000185272.9"; transcript_id "ENST00000461088.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RBM11"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RBM11-005"; level 2; havana_gene "OTTHUMG00000074263.1"; havana_transcript "OTTHUMT00000157822.1";
chr21	HAVANA	transcript	15588499	15600693	.	+	.	gene_id "ENSG00000185272.9"; transcript_id "ENST00000400577.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RBM11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RBM11-001"; level 2; tag "CCDS"; ccdsid "CCDS46635.1"; havana_gene "OTTHUMG00000074263.1"; havana_transcript "OTTHUMT00000157818.1";
chr21	HAVANA	transcript	15596696	15599705	.	+	.	gene_id "ENSG00000185272.9"; transcript_id "ENST00000475864.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RBM11"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RBM11-006"; level 2; havana_gene "OTTHUMG00000074263.1"; havana_transcript "OTTHUMT00000157823.1";
chr21	HAVANA	transcript	15608527	15651978	.	+	.	gene_id "ENSG00000215557.2"; transcript_id "ENST00000429114.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF130358.5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF130358.5-001"; level 2; havana_gene "OTTHUMG00000074256.1"; havana_transcript "OTTHUMT00000157805.1";
chr21	ENSEMBL	transcript	15646120	15685346	.	+	.	gene_id "ENSG00000215557.2"; transcript_id "ENST00000400574.2"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF130358.5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF130358.5-201"; level 3; havana_gene "OTTHUMG00000074256.1";
chr21	ENSEMBL	transcript	15646120	15663697	.	+	.	gene_id "ENSG00000215557.2"; transcript_id "ENST00000400570.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF130358.5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF130358.5-204"; level 3; havana_gene "OTTHUMG00000074256.1";
chr21	ENSEMBL	transcript	15646120	15673690	.	+	.	gene_id "ENSG00000215557.2"; transcript_id "ENST00000400572.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF130358.5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF130358.5-202"; level 3; havana_gene "OTTHUMG00000074256.1";
chr21	ENSEMBL	transcript	15646413	15673690	.	+	.	gene_id "ENSG00000215557.2"; transcript_id "ENST00000400571.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF130358.5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF130358.5-203"; level 3; havana_gene "OTTHUMG00000074256.1";
chr21	HAVANA	transcript	15646120	15710338	.	+	.	gene_id "ENSG00000243064.3"; transcript_id "ENST00000482980.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABCC13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ABCC13-004"; level 2; havana_gene "OTTHUMG00000074257.3"; havana_transcript "OTTHUMT00000157809.3";
chr21	HAVANA	transcript	15646201	15672006	.	+	.	gene_id "ENSG00000243064.3"; transcript_id "ENST00000481582.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABCC13"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ABCC13-002"; level 2; havana_gene "OTTHUMG00000074257.3"; havana_transcript "OTTHUMT00000157807.1";
chr21	HAVANA	transcript	15646212	15673707	.	+	.	gene_id "ENSG00000243064.3"; transcript_id "ENST00000467409.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABCC13"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ABCC13-001"; level 2; havana_gene "OTTHUMG00000074257.3"; havana_transcript "OTTHUMT00000157806.1";
chr21	HAVANA	transcript	15646257	15663720	.	+	.	gene_id "ENSG00000243064.3"; transcript_id "ENST00000471902.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABCC13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ABCC13-003"; level 2; havana_gene "OTTHUMG00000074257.3"; havana_transcript "OTTHUMT00000157808.1";
chr21	HAVANA	transcript	15646413	15735075	.	+	.	gene_id "ENSG00000243064.3"; transcript_id "ENST00000463099.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ABCC13"; transcript_type "transcribed_unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ABCC13-005"; level 2; ont "PGO:0000005"; ont "PGO:0000019"; havana_gene "OTTHUMG00000074257.3"; havana_transcript "OTTHUMT00000157817.2";
chr21	HAVANA	transcript	15743436	15755508	.	-	.	gene_id "ENSG00000155304.4"; transcript_id "ENST00000285667.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HSPA13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HSPA13-001"; level 2; tag "CCDS"; ccdsid "CCDS13567.1"; havana_gene "OTTHUMG00000074261.1"; havana_transcript "OTTHUMT00000157815.1";
chr21	ENSEMBL	transcript	15745859	15755458	.	-	.	gene_id "ENSG00000155304.4"; transcript_id "ENST00000544452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HSPA13"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HSPA13-201"; level 3; havana_gene "OTTHUMG00000074261.1";
chr21	HAVANA	transcript	15750663	15755805	.	-	.	gene_id "ENSG00000155304.4"; transcript_id "ENST00000478035.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HSPA13"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "HSPA13-002"; level 2; havana_gene "OTTHUMG00000074261.1"; havana_transcript "OTTHUMT00000157816.1";
chr21	HAVANA	transcript	15764891	15765753	.	+	.	gene_id "ENSG00000242342.1"; transcript_id "ENST00000470891.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF130249.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF130249.5-001"; level 2; havana_gene "OTTHUMG00000159853.1"; havana_transcript "OTTHUMT00000357734.1";
chr21	HAVANA	transcript	15857549	15955723	.	-	.	gene_id "ENSG00000155307.13"; transcript_id "ENST00000285670.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SAMSN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SAMSN1-001"; level 2; havana_gene "OTTHUMG00000074317.1"; havana_transcript "OTTHUMT00000157913.1";
chr21	HAVANA	transcript	15857549	15918664	.	-	.	gene_id "ENSG00000155307.13"; transcript_id "ENST00000400566.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SAMSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SAMSN1-002"; level 2; tag "CCDS"; ccdsid "CCDS42906.1"; havana_gene "OTTHUMG00000074317.1"; havana_transcript "OTTHUMT00000157914.1";
chr21	HAVANA	transcript	15857549	15918662	.	-	.	gene_id "ENSG00000155307.13"; transcript_id "ENST00000400564.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SAMSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SAMSN1-003"; level 2; havana_gene "OTTHUMG00000074317.1"; havana_transcript "OTTHUMT00000157915.1";
chr21	HAVANA	transcript	15868021	15872927	.	-	.	gene_id "ENSG00000155307.13"; transcript_id "ENST00000463807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SAMSN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SAMSN1-005"; level 2; havana_gene "OTTHUMG00000074317.1"; havana_transcript "OTTHUMT00000157917.1";
chr21	HAVANA	transcript	15893494	15918634	.	-	.	gene_id "ENSG00000155307.13"; transcript_id "ENST00000493640.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SAMSN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SAMSN1-004"; level 2; havana_gene "OTTHUMG00000074317.1"; havana_transcript "OTTHUMT00000157916.1";
chr21	HAVANA	transcript	15954509	16015416	.	-	.	gene_id "ENSG00000243440.1"; transcript_id "ENST00000442499.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AF165138.7"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AF165138.7-005"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074315.2"; havana_transcript "OTTHUMT00000334437.1";
chr21	HAVANA	transcript	15954509	16015416	.	-	.	gene_id "ENSG00000243440.1"; transcript_id "ENST00000427957.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AF165138.7"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AF165138.7-006"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000074315.2"; havana_transcript "OTTHUMT00000334438.1";
chr21	HAVANA	transcript	15954509	16015362	.	-	.	gene_id "ENSG00000243440.1"; transcript_id "ENST00000389438.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AF165138.7"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AF165138.7-007"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074315.2"; havana_transcript "OTTHUMT00000334439.1";
chr21	HAVANA	transcript	15954509	16015416	.	-	.	gene_id "ENSG00000243440.1"; transcript_id "ENST00000435825.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AF165138.7"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AF165138.7-008"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000074315.2"; havana_transcript "OTTHUMT00000334440.1";
chr21	HAVANA	transcript	15964251	16015454	.	-	.	gene_id "ENSG00000243440.1"; transcript_id "ENST00000435732.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AF165138.7"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AF165138.7-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000074315.2"; havana_transcript "OTTHUMT00000157909.1";
chr21	HAVANA	transcript	15966041	16031142	.	-	.	gene_id "ENSG00000243440.1"; transcript_id "ENST00000400562.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AF165138.7"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AF165138.7-001"; level 2; havana_gene "OTTHUMG00000074315.2"; havana_transcript "OTTHUMT00000157908.1";
chr21	HAVANA	transcript	15984826	15988337	.	-	.	gene_id "ENSG00000243440.1"; transcript_id "ENST00000469393.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AF165138.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF165138.7-003"; level 2; havana_gene "OTTHUMG00000074315.2"; havana_transcript "OTTHUMT00000157910.1";
chr21	HAVANA	transcript	15984826	15988337	.	-	.	gene_id "ENSG00000243440.1"; transcript_id "ENST00000467280.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AF165138.7"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AF165138.7-004"; level 2; havana_gene "OTTHUMG00000074315.2"; havana_transcript "OTTHUMT00000157911.1";
chr21	HAVANA	transcript	15954523	15970624	.	+	.	gene_id "ENSG00000223662.1"; transcript_id "ENST00000449214.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF165138.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF165138.6-001"; level 2; havana_gene "OTTHUMG00000074321.1"; havana_transcript "OTTHUMT00000157921.1";
chr21	HAVANA	transcript	16120066	16125782	.	-	.	gene_id "ENSG00000232884.1"; transcript_id "ENST00000454128.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF127936.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF127936.3-002"; level 2; havana_gene "OTTHUMG00000074314.1"; havana_transcript "OTTHUMT00000157907.1";
chr21	HAVANA	transcript	16120066	16126186	.	-	.	gene_id "ENSG00000232884.1"; transcript_id "ENST00000455253.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF127936.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF127936.3-001"; level 2; havana_gene "OTTHUMG00000074314.1"; havana_transcript "OTTHUMT00000157906.1";
chr21	HAVANA	transcript	16129909	16130673	.	+	.	gene_id "ENSG00000228600.1"; transcript_id "ENST00000453699.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "POLR2CP"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "POLR2CP-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074316.1"; havana_transcript "OTTHUMT00000157912.1";
chr21	HAVANA	transcript	16134031	16135411	.	+	.	gene_id "ENSG00000226751.1"; transcript_id "ENST00000435315.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF127936.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF127936.5-001"; level 2; havana_gene "OTTHUMG00000074319.1"; havana_transcript "OTTHUMT00000157919.1";
chr21	HAVANA	transcript	16146622	16147583	.	+	.	gene_id "ENSG00000225502.2"; transcript_id "ENST00000448152.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GAPDHP16"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "GAPDHP16-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074324.2"; havana_transcript "OTTHUMT00000157928.2";
chr21	HAVANA	transcript	16195290	16230029	.	-	.	gene_id "ENSG00000235609.1"; transcript_id "ENST00000432230.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF127936.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF127936.7-001"; level 2; havana_gene "OTTHUMG00000074322.1"; havana_transcript "OTTHUMT00000157922.1";
chr21	HAVANA	transcript	16209503	16254231	.	-	.	gene_id "ENSG00000235609.1"; transcript_id "ENST00000412426.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF127936.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF127936.7-002"; level 2; havana_gene "OTTHUMG00000074322.1"; havana_transcript "OTTHUMT00000157923.1";
chr21	HAVANA	transcript	16225292	16254296	.	-	.	gene_id "ENSG00000235609.1"; transcript_id "ENST00000418954.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF127936.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF127936.7-003"; level 2; havana_gene "OTTHUMG00000074322.1"; havana_transcript "OTTHUMT00000157924.1";
chr21	HAVANA	transcript	16201475	16202310	.	-	.	gene_id "ENSG00000226406.1"; transcript_id "ENST00000454795.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AF127936.8"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AF127936.8-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074320.1"; havana_transcript "OTTHUMT00000157920.1";
chr21	HAVANA	transcript	16290855	16319417	.	+	.	gene_id "ENSG00000235277.1"; transcript_id "ENST00000430391.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF127577.8"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF127577.8-001"; level 2; havana_gene "OTTHUMG00000074318.1"; havana_transcript "OTTHUMT00000157918.1";
chr21	HAVANA	transcript	16333556	16437255	.	-	.	gene_id "ENSG00000180530.5"; transcript_id "ENST00000400199.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NRIP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "NRIP1-001"; level 2; tag "CCDS"; ccdsid "CCDS13568.1"; havana_gene "OTTHUMG00000074323.1"; havana_transcript "OTTHUMT00000157925.1";
chr21	HAVANA	transcript	16333556	16437321	.	-	.	gene_id "ENSG00000180530.5"; transcript_id "ENST00000400202.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NRIP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "NRIP1-002"; level 2; tag "CCDS"; ccdsid "CCDS13568.1"; havana_gene "OTTHUMG00000074323.1"; havana_transcript "OTTHUMT00000157926.1";
chr21	ENSEMBL	transcript	16333556	16437126	.	-	.	gene_id "ENSG00000180530.5"; transcript_id "ENST00000318948.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NRIP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "NRIP1-201"; level 3; tag "CCDS"; ccdsid "CCDS13568.1"; havana_gene "OTTHUMG00000074323.1";
chr21	HAVANA	transcript	16340317	16374689	.	-	.	gene_id "ENSG00000180530.5"; transcript_id "ENST00000411932.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NRIP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "NRIP1-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074323.1"; havana_transcript "OTTHUMT00000157927.1";
chr21	HAVANA	transcript	16333630	16336554	.	+	.	gene_id "ENSG00000229047.1"; transcript_id "ENST00000446301.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF127577.10"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF127577.10-001"; level 2; havana_gene "OTTHUMG00000074325.1"; havana_transcript "OTTHUMT00000157929.1";
chr21	HAVANA	transcript	16343791	16365175	.	+	.	gene_id "ENSG00000231201.1"; transcript_id "ENST00000436429.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF127577.11"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF127577.11-001"; level 2; havana_gene "OTTHUMG00000074330.1"; havana_transcript "OTTHUMT00000157934.1";
chr21	ENSEMBL	transcript	16422510	16424692	.	+	.	gene_id "ENSG00000256895.1"; transcript_id "ENST00000544664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf116"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf116-201"; level 3;
chr21	HAVANA	transcript	16439391	16440158	.	+	.	gene_id "ENSG00000236471.1"; transcript_id "ENST00000449746.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF127577.12"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF127577.12-001"; level 2; havana_gene "OTTHUMG00000074332.1"; havana_transcript "OTTHUMT00000157936.1";
chr21	HAVANA	transcript	16742841	16774624	.	-	.	gene_id "ENSG00000229425.1"; transcript_id "ENST00000449602.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AJ006998.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AJ006998.2-001"; level 2; havana_gene "OTTHUMG00000074333.1"; havana_transcript "OTTHUMT00000157937.1";
chr21	HAVANA	transcript	16862849	16863086	.	-	.	gene_id "ENSG00000224524.1"; transcript_id "ENST00000450823.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "CYCSP42"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "CYCSP42-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074331.1"; havana_transcript "OTTHUMT00000157935.1";
chr21	HAVANA	transcript	16866251	16868443	.	-	.	gene_id "ENSG00000224247.1"; transcript_id "ENST00000433588.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AJ009632.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AJ009632.3-001"; level 2; havana_gene "OTTHUMG00000078773.1"; havana_transcript "OTTHUMT00000171763.1";
chr21	ENSEMBL	transcript	16986602	16986708	.	+	.	gene_id "ENSG00000212564.1"; transcript_id "ENST00000391262.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.826"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.826-201"; level 3;
chr21	ENSEMBL	transcript	17065527	17065622	.	+	.	gene_id "ENSG00000221497.1"; transcript_id "ENST00000408570.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AL034449.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AL034449.1-201"; level 3;
chr21	HAVANA	transcript	17066619	17068900	.	-	.	gene_id "ENSG00000226298.1"; transcript_id "ENST00000454157.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RAD23BLP"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RAD23BLP-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000074344.1"; havana_transcript "OTTHUMT00000157970.1";
chr21	ENSEMBL	transcript	17080978	17081077	.	+	.	gene_id "ENSG00000238591.1"; transcript_id "ENST00000459376.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13.152"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.152-201"; level 3;
chr21	HAVANA	transcript	17102344	17252377	.	+	.	gene_id "ENSG00000155313.10"; transcript_id "ENST00000285681.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP25"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP25-001"; level 2; havana_gene "OTTHUMG00000074343.2"; havana_transcript "OTTHUMT00000157963.1";
chr21	HAVANA	transcript	17102344	17251230	.	+	.	gene_id "ENSG00000155313.10"; transcript_id "ENST00000285679.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP25"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP25-002"; level 2; tag "CCDS"; ccdsid "CCDS33515.1"; havana_gene "OTTHUMG00000074343.2"; havana_transcript "OTTHUMT00000157964.1";
chr21	HAVANA	transcript	17102344	17251230	.	+	.	gene_id "ENSG00000155313.10"; transcript_id "ENST00000351097.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP25"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "USP25-003"; level 2; havana_gene "OTTHUMG00000074343.2"; havana_transcript "OTTHUMT00000157965.1";
chr21	ENSEMBL	transcript	17102496	17252377	.	+	.	gene_id "ENSG00000155313.10"; transcript_id "ENST00000400183.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP25"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP25-201"; level 3; havana_gene "OTTHUMG00000074343.2";
chr21	HAVANA	transcript	17171853	17177974	.	+	.	gene_id "ENSG00000155313.10"; transcript_id "ENST00000464435.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP25"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "USP25-007"; level 2; havana_gene "OTTHUMG00000074343.2"; havana_transcript "OTTHUMT00000157969.1";
chr21	HAVANA	transcript	17197329	17205698	.	+	.	gene_id "ENSG00000155313.10"; transcript_id "ENST00000453553.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP25"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "USP25-005"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074343.2"; havana_transcript "OTTHUMT00000157967.1";
chr21	HAVANA	transcript	17214837	17246837	.	+	.	gene_id "ENSG00000155313.10"; transcript_id "ENST00000449491.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP25"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "USP25-006"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074343.2"; havana_transcript "OTTHUMT00000157968.1";
chr21	HAVANA	transcript	17248315	17251230	.	+	.	gene_id "ENSG00000155313.10"; transcript_id "ENST00000478932.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP25"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "USP25-004"; level 2; havana_gene "OTTHUMG00000074343.2"; havana_transcript "OTTHUMT00000157966.1";
chr21	HAVANA	transcript	17116323	17117399	.	-	.	gene_id "ENSG00000234159.1"; transcript_id "ENST00000433427.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RBPMSLP"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RBPMSLP-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074345.1"; havana_transcript "OTTHUMT00000157971.1";
chr21	ENSEMBL	transcript	17407733	17407829	.	-	.	gene_id "ENSG00000252273.1"; transcript_id "ENST00000516464.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.1110"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.1110-201"; level 3;
chr21	HAVANA	transcript	17442842	17982094	.	+	.	gene_id "ENSG00000215386.5"; transcript_id "ENST00000458468.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "C21orf34"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf34-001"; level 2; havana_gene "OTTHUMG00000074377.1"; havana_transcript "OTTHUMT00000158029.1";
chr21	HAVANA	transcript	17443434	17979450	.	+	.	gene_id "ENSG00000215386.5"; transcript_id "ENST00000400178.2"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "C21orf34"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf34-004"; level 2; havana_gene "OTTHUMG00000074377.1"; havana_transcript "OTTHUMT00000158032.1";
chr21	HAVANA	transcript	17443553	17979456	.	+	.	gene_id "ENSG00000215386.5"; transcript_id "ENST00000456342.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "C21orf34"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf34-002"; level 2; havana_gene "OTTHUMG00000074377.1"; havana_transcript "OTTHUMT00000158030.1";
chr21	HAVANA	transcript	17566699	17894124	.	+	.	gene_id "ENSG00000215386.5"; transcript_id "ENST00000419952.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "C21orf34"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf34-005"; level 2; havana_gene "OTTHUMG00000074377.1"; havana_transcript "OTTHUMT00000158033.1";
chr21	HAVANA	transcript	17566788	17979542	.	+	.	gene_id "ENSG00000215386.5"; transcript_id "ENST00000445461.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "C21orf34"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf34-006"; level 2; havana_gene "OTTHUMG00000074377.1"; havana_transcript "OTTHUMT00000158034.1";
chr21	HAVANA	transcript	17763934	17979438	.	+	.	gene_id "ENSG00000215386.5"; transcript_id "ENST00000428669.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "C21orf34"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf34-007"; level 2; havana_gene "OTTHUMG00000074377.1"; havana_transcript "OTTHUMT00000158035.1";
chr21	HAVANA	transcript	17791752	17860215	.	+	.	gene_id "ENSG00000215386.5"; transcript_id "ENST00000435697.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "C21orf34"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf34-008"; level 2; havana_gene "OTTHUMG00000074377.1"; havana_transcript "OTTHUMT00000158036.1";
chr21	HAVANA	transcript	17791838	17979423	.	+	.	gene_id "ENSG00000215386.5"; transcript_id "ENST00000453910.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "C21orf34"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf34-009"; level 2; havana_gene "OTTHUMG00000074377.1"; havana_transcript "OTTHUMT00000158037.1";
chr21	HAVANA	transcript	17791999	17979404	.	+	.	gene_id "ENSG00000215386.5"; transcript_id "ENST00000418813.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "C21orf34"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf34-010"; level 2; havana_gene "OTTHUMG00000074377.1"; havana_transcript "OTTHUMT00000158038.1";
chr21	HAVANA	transcript	17909601	17979569	.	+	.	gene_id "ENSG00000215386.5"; transcript_id "ENST00000441820.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "C21orf34"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf34-003"; level 2; havana_gene "OTTHUMG00000074377.1"; havana_transcript "OTTHUMT00000158031.1";
chr21	HAVANA	transcript	17466735	17467692	.	-	.	gene_id "ENSG00000214976.2"; transcript_id "ENST00000399358.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "VDAC2P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "VDAC2P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074376.1"; havana_transcript "OTTHUMT00000158028.1";
chr21	HAVANA	transcript	17493630	17493964	.	-	.	gene_id "ENSG00000224602.1"; transcript_id "ENST00000418544.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001346.3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001346.3-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074375.1"; havana_transcript "OTTHUMT00000158027.1";
chr21	ENSEMBL	transcript	17657017	17657089	.	-	.	gene_id "ENSG00000201025.1"; transcript_id "ENST00000364155.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORD74.5"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORD74.5-201"; level 3;
chr21	ENSEMBL	transcript	17911409	17911489	.	+	.	gene_id "ENSG00000207638.1"; transcript_id "ENST00000384906.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR99A"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR99A-201"; level 3;
chr21	ENSEMBL	transcript	17912143	17912236	.	+	.	gene_id "ENSG00000199030.1"; transcript_id "ENST00000362160.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIRLET7C"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIRLET7C-201"; level 3;
chr21	ENSEMBL	transcript	17962557	17962645	.	+	.	gene_id "ENSG00000207863.1"; transcript_id "ENST00000385128.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR125B2"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR125B2-201"; level 3;
chr21	HAVANA	transcript	18003146	18012952	.	+	.	gene_id "ENSG00000228798.1"; transcript_id "ENST00000413645.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000473.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000473.5-001"; level 2; havana_gene "OTTHUMG00000074396.1"; havana_transcript "OTTHUMT00000158059.1";
chr21	HAVANA	transcript	18003760	18013002	.	+	.	gene_id "ENSG00000228798.1"; transcript_id "ENST00000438762.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000473.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000473.5-002"; level 2; havana_gene "OTTHUMG00000074396.1"; havana_transcript "OTTHUMT00000158060.1";
chr21	ENSEMBL	transcript	18091317	18091476	.	+	.	gene_id "ENSG00000239023.1"; transcript_id "ENST00000458992.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U1.108"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U1.108-201"; level 3;
chr21	HAVANA	transcript	18126838	18188007	.	-	.	gene_id "ENSG00000237735.1"; transcript_id "ENST00000444868.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000473.6"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000473.6-001"; level 2; havana_gene "OTTHUMG00000074394.1"; havana_transcript "OTTHUMT00000158057.1";
chr21	HAVANA	transcript	18235195	18246011	.	-	.	gene_id "ENSG00000232886.1"; transcript_id "ENST00000430064.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF212831.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF212831.2-001"; level 2; havana_gene "OTTHUMG00000074395.1"; havana_transcript "OTTHUMT00000158058.1";
chr21	HAVANA	transcript	18582787	18583665	.	-	.	gene_id "ENSG00000225735.1"; transcript_id "ENST00000433383.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000457.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000457.1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074393.1"; havana_transcript "OTTHUMT00000158056.1";
chr21	ENSEMBL	transcript	18803865	18803965	.	+	.	gene_id "ENSG00000252462.1"; transcript_id "ENST00000516653.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.1158"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.1158-201"; level 3;
chr21	HAVANA	transcript	18811208	18821503	.	+	.	gene_id "ENSG00000232560.2"; transcript_id "ENST00000440664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf37"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf37-001"; level 2; havana_gene "OTTHUMG00000074397.1"; havana_transcript "OTTHUMT00000158061.1";
chr21	ENSEMBL	transcript	18824999	18825052	.	+	.	gene_id "ENSG00000252613.1"; transcript_id "ENST00000516804.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U7.101"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U7.101-201"; level 3;
chr21	HAVANA	transcript	18872997	18873142	.	-	.	gene_id "ENSG00000226580.1"; transcript_id "ENST00000445481.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000963.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000963.2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074503.1"; havana_transcript "OTTHUMT00000158201.1";
chr21	HAVANA	transcript	18884700	18942418	.	+	.	gene_id "ENSG00000154639.14"; transcript_id "ENST00000284878.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CXADR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CXADR-001"; level 2; tag "CCDS"; ccdsid "CCDS33519.1"; havana_gene "OTTHUMG00000074508.2"; havana_transcript "OTTHUMT00000158209.1";
chr21	HAVANA	transcript	18885364	18938170	.	+	.	gene_id "ENSG00000154639.14"; transcript_id "ENST00000400166.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CXADR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CXADR-003"; level 2; havana_gene "OTTHUMG00000074508.2"; havana_transcript "OTTHUMT00000158211.1";
chr21	HAVANA	transcript	18885448	18937805	.	+	.	gene_id "ENSG00000154639.14"; transcript_id "ENST00000356275.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CXADR"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CXADR-005"; level 2; havana_gene "OTTHUMG00000074508.2"; havana_transcript "OTTHUMT00000340163.1";
chr21	HAVANA	transcript	18885448	18965897	.	+	.	gene_id "ENSG00000154639.14"; transcript_id "ENST00000400169.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CXADR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CXADR-002"; level 2; havana_gene "OTTHUMG00000074508.2"; havana_transcript "OTTHUMT00000158210.1";
chr21	HAVANA	transcript	18885448	18937933	.	+	.	gene_id "ENSG00000154639.14"; transcript_id "ENST00000400165.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CXADR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CXADR-004"; level 2; havana_gene "OTTHUMG00000074508.2"; havana_transcript "OTTHUMT00000158212.1";
chr21	ENSEMBL	transcript	18885448	18938010	.	+	.	gene_id "ENSG00000154639.14"; transcript_id "ENST00000306618.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CXADR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CXADR-201"; level 3; tag "CCDS"; ccdsid "CCDS33519.1"; havana_gene "OTTHUMG00000074508.2";
chr21	ENSEMBL	transcript	18890841	18891311	.	-	.	gene_id "ENSG00000232260.1"; transcript_id "ENST00000441537.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000963.3"; transcript_type "retrotransposed"; transcript_status "KNOWN"; transcript_name "AP000963.3-201"; level 1; havana_gene "OTTHUMG00000074502.1";
chr21	HAVANA	transcript	18890844	18891311	.	-	.	gene_id "ENSG00000232260.1"; transcript_id "ENST00000413813.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000963.3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000963.3-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074502.1"; havana_transcript "OTTHUMT00000158200.1";
chr21	ENSEMBL	transcript	18899458	18899565	.	-	.	gene_id "ENSG00000200754.1"; transcript_id "ENST00000363884.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Y_RNA.209"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Y_RNA.209-201"; level 3;
chr21	ENSEMBL	transcript	18949116	18949224	.	+	.	gene_id "ENSG00000199962.1"; transcript_id "ENST00000363092.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Y_RNA.105"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Y_RNA.105-201"; level 3;
chr21	HAVANA	transcript	18965971	18985162	.	-	.	gene_id "ENSG00000154640.10"; transcript_id "ENST00000339775.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BTG3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BTG3-001"; level 2; tag "CCDS"; ccdsid "CCDS46636.1"; havana_gene "OTTHUMG00000074501.2"; havana_transcript "OTTHUMT00000158195.1";
chr21	HAVANA	transcript	18965971	18985265	.	-	.	gene_id "ENSG00000154640.10"; transcript_id "ENST00000348354.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BTG3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BTG3-002"; level 2; tag "CCDS"; ccdsid "CCDS13569.1"; havana_gene "OTTHUMG00000074501.2"; havana_transcript "OTTHUMT00000158196.1";
chr21	HAVANA	transcript	18966408	18971409	.	-	.	gene_id "ENSG00000154640.10"; transcript_id "ENST00000471860.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BTG3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BTG3-006"; level 2; havana_gene "OTTHUMG00000074501.2"; havana_transcript "OTTHUMT00000259053.1";
chr21	HAVANA	transcript	18971039	18977451	.	-	.	gene_id "ENSG00000154640.10"; transcript_id "ENST00000496601.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BTG3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BTG3-005"; level 2; havana_gene "OTTHUMG00000074501.2"; havana_transcript "OTTHUMT00000158199.1";
chr21	HAVANA	transcript	18981093	18985169	.	-	.	gene_id "ENSG00000154640.10"; transcript_id "ENST00000464058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BTG3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BTG3-004"; level 2; havana_gene "OTTHUMG00000074501.2"; havana_transcript "OTTHUMT00000158198.1";
chr21	HAVANA	transcript	18981325	18985263	.	-	.	gene_id "ENSG00000154640.10"; transcript_id "ENST00000457956.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BTG3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BTG3-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074501.2"; havana_transcript "OTTHUMT00000158197.1";
chr21	HAVANA	transcript	19031594	19032702	.	-	.	gene_id "ENSG00000226956.1"; transcript_id "ENST00000416641.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000432.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000432.2-001"; level 2; havana_gene "OTTHUMG00000074507.1"; havana_transcript "OTTHUMT00000158208.1";
chr21	HAVANA	transcript	19135632	19164840	.	-	.	gene_id "ENSG00000240770.1"; transcript_id "ENST00000430815.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "NCRNA00285"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00285-003"; level 2; havana_gene "OTTHUMG00000074506.1"; havana_transcript "OTTHUMT00000158207.1";
chr21	HAVANA	transcript	19149721	19164826	.	-	.	gene_id "ENSG00000240770.1"; transcript_id "ENST00000439392.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "NCRNA00285"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00285-002"; level 2; havana_gene "OTTHUMG00000074506.1"; havana_transcript "OTTHUMT00000158206.1";
chr21	HAVANA	transcript	19149721	19164826	.	-	.	gene_id "ENSG00000240770.1"; transcript_id "ENST00000430401.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "NCRNA00285"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00285-001"; level 2; havana_gene "OTTHUMG00000074506.1"; havana_transcript "OTTHUMT00000158205.1";
chr21	HAVANA	transcript	19161284	19191703	.	-	.	gene_id "ENSG00000154642.6"; transcript_id "ENST00000284881.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf91"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf91-003"; level 2; tag "CCDS"; ccdsid "CCDS42907.1"; havana_gene "OTTHUMG00000074509.7"; havana_transcript "OTTHUMT00000158215.1";
chr21	HAVANA	transcript	19165121	19191703	.	-	.	gene_id "ENSG00000154642.6"; transcript_id "ENST00000400559.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf91"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf91-001"; level 2; tag "CCDS"; ccdsid "CCDS42908.1"; havana_gene "OTTHUMG00000074509.7"; havana_transcript "OTTHUMT00000158213.1";
chr21	HAVANA	transcript	19165564	19191703	.	-	.	gene_id "ENSG00000154642.6"; transcript_id "ENST00000400558.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf91"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf91-002"; level 2; tag "CCDS"; ccdsid "CCDS42909.1"; havana_gene "OTTHUMG00000074509.7"; havana_transcript "OTTHUMT00000158214.1";
chr21	HAVANA	transcript	19167525	19191336	.	-	.	gene_id "ENSG00000154642.6"; transcript_id "ENST00000405964.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf91"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf91-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074509.7"; havana_transcript "OTTHUMT00000158217.7";
chr21	HAVANA	transcript	19169040	19191664	.	-	.	gene_id "ENSG00000154642.6"; transcript_id "ENST00000493464.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf91"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf91-004"; level 2; havana_gene "OTTHUMG00000074509.7"; havana_transcript "OTTHUMT00000158216.1";
chr21	HAVANA	transcript	19190038	19191679	.	-	.	gene_id "ENSG00000154642.6"; transcript_id "ENST00000482915.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf91"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C21orf91-006"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000074509.7"; havana_transcript "OTTHUMT00000158218.1";
chr21	HAVANA	transcript	19165801	19629006	.	+	.	gene_id "ENSG00000154645.8"; transcript_id "ENST00000427223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHODL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHODL-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074519.3"; havana_transcript "OTTHUMT00000334569.1";
chr21	HAVANA	transcript	19165801	19629006	.	+	.	gene_id "ENSG00000154645.8"; transcript_id "ENST00000452759.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHODL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHODL-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074519.3"; havana_transcript "OTTHUMT00000334100.1";
chr21	HAVANA	transcript	19165801	19629006	.	+	.	gene_id "ENSG00000154645.8"; transcript_id "ENST00000465099.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHODL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHODL-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074519.3"; havana_transcript "OTTHUMT00000334101.1";
chr21	HAVANA	transcript	19273580	19639690	.	+	.	gene_id "ENSG00000154645.8"; transcript_id "ENST00000400128.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHODL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHODL-002"; level 2; havana_gene "OTTHUMG00000074519.3"; havana_transcript "OTTHUMT00000158233.1";
chr21	HAVANA	transcript	19289657	19639690	.	+	.	gene_id "ENSG00000154645.8"; transcript_id "ENST00000400131.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHODL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHODL-201"; level 2; havana_gene "OTTHUMG00000074519.3"; havana_transcript "OTTHUMT00000158234.1";
chr21	HAVANA	transcript	19289657	19639690	.	+	.	gene_id "ENSG00000154645.8"; transcript_id "ENST00000400135.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHODL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHODL-004"; level 2; havana_gene "OTTHUMG00000074519.3"; havana_transcript "OTTHUMT00000158235.1";
chr21	HAVANA	transcript	19289657	19639690	.	+	.	gene_id "ENSG00000154645.8"; transcript_id "ENST00000400127.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHODL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHODL-005"; level 2; havana_gene "OTTHUMG00000074519.3"; havana_transcript "OTTHUMT00000158236.1";
chr21	HAVANA	transcript	19617150	19639690	.	+	.	gene_id "ENSG00000154645.8"; transcript_id "ENST00000299295.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHODL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHODL-001"; level 2; tag "CCDS"; ccdsid "CCDS13570.1"; havana_gene "OTTHUMG00000074519.3"; havana_transcript "OTTHUMT00000158232.1";
chr21	HAVANA	transcript	19617150	19639682	.	+	.	gene_id "ENSG00000154645.8"; transcript_id "ENST00000338326.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHODL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHODL-003"; level 2; havana_gene "OTTHUMG00000074519.3"; havana_transcript "OTTHUMT00000158234.1";
chr21	ENSEMBL	transcript	19618192	19639154	.	+	.	gene_id "ENSG00000154645.8"; transcript_id "ENST00000543733.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHODL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHODL-202"; level 3; havana_gene "OTTHUMG00000074519.3";
chr21	HAVANA	transcript	19165805	19183162	.	+	.	gene_id "ENSG00000244676.1"; transcript_id "ENST00000428689.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AL109761.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AL109761.5-001"; level 2; havana_gene "OTTHUMG00000074504.1"; havana_transcript "OTTHUMT00000158202.1";
chr21	HAVANA	transcript	19181262	19183162	.	+	.	gene_id "ENSG00000244676.1"; transcript_id "ENST00000454737.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AL109761.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AL109761.5-002"; level 2; havana_gene "OTTHUMG00000074504.1"; havana_transcript "OTTHUMT00000158203.1";
chr21	HAVANA	transcript	19207333	19257925	.	-	.	gene_id "ENSG00000231755.1"; transcript_id "ENST00000447175.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00157"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00157-001"; level 2; havana_gene "OTTHUMG00000074500.1"; havana_transcript "OTTHUMT00000158194.1";
chr21	ENSEMBL	transcript	19264028	19264116	.	+	.	gene_id "ENSG00000221335.1"; transcript_id "ENST00000408408.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000745.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000745.1-201"; level 3;
chr21	HAVANA	transcript	19266510	19266802	.	-	.	gene_id "ENSG00000215369.3"; transcript_id "ENST00000456825.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPL37P3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPL37P3-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074505.1"; havana_transcript "OTTHUMT00000158204.1";
chr21	HAVANA	transcript	19394687	19487222	.	-	.	gene_id "ENSG00000227330.1"; transcript_id "ENST00000432412.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000998.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000998.2-001"; level 2; havana_gene "OTTHUMG00000074517.1"; havana_transcript "OTTHUMT00000158230.1";
chr21	HAVANA	transcript	19641433	19775973	.	-	.	gene_id "ENSG00000154646.4"; transcript_id "ENST00000284885.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMPRSS15-001"; level 2; tag "CCDS"; ccdsid "CCDS13571.1"; havana_gene "OTTHUMG00000074518.5"; havana_transcript "OTTHUMT00000158231.2";
chr21	HAVANA	transcript	19737457	19858197	.	-	.	gene_id "ENSG00000154646.4"; transcript_id "ENST00000422787.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS15"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TMPRSS15-002"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074518.5"; havana_transcript "OTTHUMT00000158260.4";
chr21	HAVANA	transcript	19737558	19833049	.	-	.	gene_id "ENSG00000154646.4"; transcript_id "ENST00000474775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMPRSS15-003"; level 2; havana_gene "OTTHUMG00000074518.5"; havana_transcript "OTTHUMT00000158261.1";
chr21	HAVANA	transcript	19849676	19858917	.	-	.	gene_id "ENSG00000228708.1"; transcript_id "ENST00000455391.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AL109763.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AL109763.1-001"; level 2; havana_gene "OTTHUMG00000074548.1"; havana_transcript "OTTHUMT00000158282.1";
chr21	HAVANA	transcript	19933583	20132321	.	-	.	gene_id "ENSG00000224141.1"; transcript_id "ENST00000437492.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AL109763.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL109763.2-001"; level 2; havana_gene "OTTHUMG00000074544.1"; havana_transcript "OTTHUMT00000158276.1";
chr21	HAVANA	transcript	19933933	20132122	.	-	.	gene_id "ENSG00000224141.1"; transcript_id "ENST00000355189.3"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AL109763.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL109763.2-002"; level 2; havana_gene "OTTHUMG00000074544.1"; havana_transcript "OTTHUMT00000158277.1";
chr21	HAVANA	transcript	19984380	20125346	.	-	.	gene_id "ENSG00000224141.1"; transcript_id "ENST00000414582.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AL109763.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL109763.2-003"; level 2; havana_gene "OTTHUMG00000074544.1"; havana_transcript "OTTHUMT00000158278.1";
chr21	HAVANA	transcript	19986749	20022678	.	+	.	gene_id "ENSG00000230233.1"; transcript_id "ENST00000416002.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF240627.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF240627.2-001"; level 2; havana_gene "OTTHUMG00000074543.1"; havana_transcript "OTTHUMT00000158275.1";
chr21	ENSEMBL	transcript	20163369	20163452	.	+	.	gene_id "ENSG00000238573.1"; transcript_id "ENST00000458757.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP001538.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP001538.1-201"; level 3;
chr21	ENSEMBL	transcript	20230097	20230594	.	+	.	gene_id "ENSG00000198618.4"; transcript_id "ENST00000394336.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPIAP22"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "PPIAP22-201"; level 3; havana_gene "OTTHUMG00000074545.1";
chr21	HAVANA	transcript	20230097	20230594	.	+	.	gene_id "ENSG00000198618.4"; transcript_id "ENST00000358455.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPIAP22"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "PPIAP22-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000074545.1"; havana_transcript "OTTHUMT00000158279.1";
chr21	HAVANA	transcript	20290252	20308177	.	-	.	gene_id "ENSG00000232193.1"; transcript_id "ENST00000440372.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AL157359.4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AL157359.4-001"; level 2; havana_gene "OTTHUMG00000074549.1"; havana_transcript "OTTHUMT00000158283.1";
chr21	HAVANA	transcript	20325582	20339376	.	-	.	gene_id "ENSG00000226204.1"; transcript_id "ENST00000449840.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AL157359.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AL157359.3-001"; level 2; havana_gene "OTTHUMG00000074546.1"; havana_transcript "OTTHUMT00000158280.1";
chr21	HAVANA	transcript	20418629	20420003	.	+	.	gene_id "ENSG00000235965.1"; transcript_id "ENST00000450653.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000431.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000431.1-001"; level 2; havana_gene "OTTHUMG00000074542.1"; havana_transcript "OTTHUMT00000158274.1";
chr21	HAVANA	transcript	20502841	20506741	.	+	.	gene_id "ENSG00000229289.1"; transcript_id "ENST00000424219.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000431.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000431.2-001"; level 2; havana_gene "OTTHUMG00000074550.1"; havana_transcript "OTTHUMT00000158284.1";
chr21	HAVANA	transcript	20616860	20618709	.	+	.	gene_id "ENSG00000226818.1"; transcript_id "ENST00000413933.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SLC6A6P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "SLC6A6P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074547.1"; havana_transcript "OTTHUMT00000158281.1";
chr21	HAVANA	transcript	20673930	20676056	.	+	.	gene_id "ENSG00000231620.1"; transcript_id "ENST00000433210.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000855.4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000855.4-001"; level 2; havana_gene "OTTHUMG00000074551.1"; havana_transcript "OTTHUMT00000158285.1";
chr21	ENSEMBL	transcript	20717465	20717629	.	+	.	gene_id "ENSG00000212609.1"; transcript_id "ENST00000391307.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U1.103"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U1.103-201"; level 3;
chr21	HAVANA	transcript	20966155	20966422	.	+	.	gene_id "ENSG00000230198.1"; transcript_id "ENST00000448908.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPL37P4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPL37P4-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074608.1"; havana_transcript "OTTHUMT00000158342.1";
chr21	HAVANA	transcript	21112023	21112464	.	+	.	gene_id "ENSG00000229336.1"; transcript_id "ENST00000282964.5"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000568.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000568.2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074609.1"; havana_transcript "OTTHUMT00000158343.1";
chr21	HAVANA	transcript	21131673	21132442	.	-	.	gene_id "ENSG00000215353.2"; transcript_id "ENST00000400117.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "C1QBPP"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "C1QBPP-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000074605.1"; havana_transcript "OTTHUMT00000158339.1";
chr21	HAVANA	transcript	21265593	21272069	.	-	.	gene_id "ENSG00000233480.1"; transcript_id "ENST00000443479.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000946.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000946.2-001"; level 2; havana_gene "OTTHUMG00000074607.1"; havana_transcript "OTTHUMT00000158341.1";
chr21	HAVANA	transcript	21629065	21631133	.	-	.	gene_id "ENSG00000233236.1"; transcript_id "ENST00000436373.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001171.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001171.1-001"; level 2; havana_gene "OTTHUMG00000074606.1"; havana_transcript "OTTHUMT00000158340.1";
chr21	ENSEMBL	transcript	21728060	21728164	.	-	.	gene_id "ENSG00000251851.1"; transcript_id "ENST00000516042.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.1002"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.1002-201"; level 3;
chr21	ENSEMBL	transcript	21728965	21729208	.	+	.	gene_id "ENSG00000252963.1"; transcript_id "ENST00000517154.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "7SK.285"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "7SK.285-201"; level 3;
chr21	HAVANA	transcript	21760646	21761157	.	+	.	gene_id "ENSG00000233676.2"; transcript_id "ENST00000425091.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FDPSP6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "FDPSP6-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078059.1"; havana_transcript "OTTHUMT00000170844.1";
chr21	HAVANA	transcript	21797261	21798518	.	-	.	gene_id "ENSG00000234439.1"; transcript_id "ENST00000447938.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRT18P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRT18P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078062.1"; havana_transcript "OTTHUMT00000170847.1";
chr21	HAVANA	transcript	21802755	21803074	.	-	.	gene_id "ENSG00000233206.1"; transcript_id "ENST00000413190.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPS3AP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPS3AP1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078061.1"; havana_transcript "OTTHUMT00000170846.1";
chr21	HAVANA	transcript	22114908	22175381	.	-	.	gene_id "ENSG00000224924.1"; transcript_id "ENST00000416768.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf131"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf131-001"; level 2; havana_gene "OTTHUMG00000078063.1"; havana_transcript "OTTHUMT00000170848.1";
chr21	HAVANA	transcript	22114913	22175416	.	-	.	gene_id "ENSG00000224924.1"; transcript_id "ENST00000437238.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf131"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf131-002"; level 2; havana_gene "OTTHUMG00000078063.1"; havana_transcript "OTTHUMT00000170849.1";
chr21	HAVANA	transcript	22115239	22175426	.	-	.	gene_id "ENSG00000224924.1"; transcript_id "ENST00000435279.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf131"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf131-003"; level 2; havana_gene "OTTHUMG00000078063.1"; havana_transcript "OTTHUMT00000170850.1";
chr21	HAVANA	transcript	22115239	22175388	.	-	.	gene_id "ENSG00000224924.1"; transcript_id "ENST00000452561.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf131"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf131-004"; level 2; havana_gene "OTTHUMG00000078063.1"; havana_transcript "OTTHUMT00000170851.1";
chr21	HAVANA	transcript	22116057	22175404	.	-	.	gene_id "ENSG00000224924.1"; transcript_id "ENST00000419299.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf131"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf131-005"; level 2; havana_gene "OTTHUMG00000078063.1"; havana_transcript "OTTHUMT00000170852.1";
chr21	HAVANA	transcript	22200445	22200940	.	-	.	gene_id "ENSG00000215351.3"; transcript_id "ENST00000448832.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPIAP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "PPIAP1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078060.1"; havana_transcript "OTTHUMT00000170845.1";
chr21	HAVANA	transcript	22370633	22915650	.	+	.	gene_id "ENSG00000154654.9"; transcript_id "ENST00000400546.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NCAM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "NCAM2-001"; level 2; tag "CCDS"; ccdsid "CCDS42910.1"; havana_gene "OTTHUMG00000078121.3"; havana_transcript "OTTHUMT00000170915.1";
chr21	ENSEMBL	transcript	22370882	22910278	.	+	.	gene_id "ENSG00000154654.9"; transcript_id "ENST00000284894.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NCAM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "NCAM2-201"; level 3; tag "CCDS"; ccdsid "CCDS42910.1"; havana_gene "OTTHUMG00000078121.3";
chr21	ENSEMBL	transcript	22519438	22757994	.	+	.	gene_id "ENSG00000154654.9"; transcript_id "ENST00000535285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NCAM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "NCAM2-202"; level 3; havana_gene "OTTHUMG00000078121.3";
chr21	HAVANA	transcript	22519442	22746243	.	+	.	gene_id "ENSG00000154654.9"; transcript_id "ENST00000508782.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NCAM2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCAM2-005"; level 2; havana_gene "OTTHUMG00000078121.3"; havana_transcript "OTTHUMT00000366858.1";
chr21	HAVANA	transcript	22611662	22664510	.	+	.	gene_id "ENSG00000154654.9"; transcript_id "ENST00000486367.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NCAM2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCAM2-004"; level 2; havana_gene "OTTHUMG00000078121.3"; havana_transcript "OTTHUMT00000170918.1";
chr21	HAVANA	transcript	22662397	22710798	.	+	.	gene_id "ENSG00000154654.9"; transcript_id "ENST00000461281.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NCAM2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCAM2-003"; level 2; havana_gene "OTTHUMG00000078121.3"; havana_transcript "OTTHUMT00000170917.1";
chr21	HAVANA	transcript	22836061	22841104	.	+	.	gene_id "ENSG00000154654.9"; transcript_id "ENST00000484983.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NCAM2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCAM2-002"; level 2; havana_gene "OTTHUMG00000078121.3"; havana_transcript "OTTHUMT00000170916.1";
chr21	HAVANA	transcript	22595616	22599150	.	-	.	gene_id "ENSG00000226771.1"; transcript_id "ENST00000425058.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001136.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001136.2-001"; level 2; havana_gene "OTTHUMG00000078120.1"; havana_transcript "OTTHUMT00000170914.1";
chr21	ENSEMBL	transcript	22770068	22770146	.	-	.	gene_id "ENSG00000221210.1"; transcript_id "ENST00000408283.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP001137.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP001137.1-201"; level 3;
chr21	HAVANA	transcript	22939084	22987758	.	+	.	gene_id "ENSG00000234730.1"; transcript_id "ENST00000428205.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF241725.4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF241725.4-001"; level 2; havana_gene "OTTHUMG00000078122.1"; havana_transcript "OTTHUMT00000170919.1";
chr21	ENSEMBL	transcript	23006773	23007049	.	-	.	gene_id "ENSG00000198434.1"; transcript_id "ENST00000358086.1"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AF241725.1"; transcript_type "pseudogene"; transcript_status "NOVEL"; transcript_name "AF241725.1-201"; level 3;
chr21	HAVANA	transcript	23027359	23058649	.	-	.	gene_id "ENSG00000237527.1"; transcript_id "ENST00000416182.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF241725.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF241725.6-001"; level 2; havana_gene "OTTHUMG00000078124.1"; havana_transcript "OTTHUMT00000170921.1";
chr21	HAVANA	transcript	23095613	23109639	.	-	.	gene_id "ENSG00000238265.1"; transcript_id "ENST00000419069.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf117"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf117-001"; level 2; havana_gene "OTTHUMG00000078123.1"; havana_transcript "OTTHUMT00000170920.1";
chr21	HAVANA	transcript	23119293	23169735	.	+	.	gene_id "ENSG00000233997.1"; transcript_id "ENST00000425979.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000475.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000475.2-002"; level 2; havana_gene "OTTHUMG00000078125.1"; havana_transcript "OTTHUMT00000170923.1";
chr21	HAVANA	transcript	23119305	23169735	.	+	.	gene_id "ENSG00000233997.1"; transcript_id "ENST00000430060.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000475.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000475.2-001"; level 2; havana_gene "OTTHUMG00000078125.1"; havana_transcript "OTTHUMT00000170922.1";
chr21	HAVANA	transcript	23305635	23348000	.	-	.	gene_id "ENSG00000227075.1"; transcript_id "ENST00000452500.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000472.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000472.3-001"; level 2; havana_gene "OTTHUMG00000078257.1"; havana_transcript "OTTHUMT00000171059.1";
chr21	HAVANA	transcript	23381263	23390475	.	-	.	gene_id "ENSG00000233215.1"; transcript_id "ENST00000416327.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000472.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000472.2-003"; level 2; havana_gene "OTTHUMG00000078243.1"; havana_transcript "OTTHUMT00000171045.1";
chr21	HAVANA	transcript	23381477	23470778	.	-	.	gene_id "ENSG00000233215.1"; transcript_id "ENST00000420255.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000472.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000472.2-001"; level 2; havana_gene "OTTHUMG00000078243.1"; havana_transcript "OTTHUMT00000171043.1";
chr21	HAVANA	transcript	23413493	23426688	.	-	.	gene_id "ENSG00000233215.1"; transcript_id "ENST00000419467.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000472.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000472.2-002"; level 2; havana_gene "OTTHUMG00000078243.1"; havana_transcript "OTTHUMT00000171044.1";
chr21	HAVANA	transcript	23470936	23488847	.	+	.	gene_id "ENSG00000184856.5"; transcript_id "ENST00000419431.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf74"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf74-001"; level 2; havana_gene "OTTHUMG00000078244.1"; havana_transcript "OTTHUMT00000171046.1";
chr21	HAVANA	transcript	23507018	23508403	.	-	.	gene_id "ENSG00000234340.1"; transcript_id "ENST00000433524.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000705.8"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000705.8-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000156301.1"; havana_transcript "OTTHUMT00000343763.1";
chr21	HAVANA	transcript	23526270	23526619	.	-	.	gene_id "ENSG00000231136.1"; transcript_id "ENST00000454567.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000705.6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000705.6-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000078252.1"; havana_transcript "OTTHUMT00000171054.1";
chr21	ENSEMBL	transcript	23577511	23577651	.	+	.	gene_id "ENSG00000202339.1"; transcript_id "ENST00000365469.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U4.45"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U4.45-201"; level 3;
chr21	HAVANA	transcript	23582258	23793139	.	+	.	gene_id "ENSG00000226043.1"; transcript_id "ENST00000444130.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000705.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000705.7-001"; level 2; havana_gene "OTTHUMG00000078249.1"; havana_transcript "OTTHUMT00000171051.1";
chr21	HAVANA	transcript	23808610	23810669	.	-	.	gene_id "ENSG00000223488.2"; transcript_id "ENST00000379571.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MAPK6PS2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "MAPK6PS2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078251.1"; havana_transcript "OTTHUMT00000171053.1";
chr21	HAVANA	transcript	23872924	23892377	.	-	.	gene_id "ENSG00000234034.1"; transcript_id "ENST00000441759.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000959.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000959.2-001"; level 2; havana_gene "OTTHUMG00000078247.1"; havana_transcript "OTTHUMT00000171049.1";
chr21	HAVANA	transcript	24254903	24256321	.	+	.	gene_id "ENSG00000225906.1"; transcript_id "ENST00000438328.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000949.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000949.1-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000078254.1"; havana_transcript "OTTHUMT00000171056.1";
chr21	HAVANA	transcript	24437813	24503528	.	+	.	gene_id "ENSG00000230972.1"; transcript_id "ENST00000421604.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001255.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001255.2-001"; level 2; havana_gene "OTTHUMG00000078253.1"; havana_transcript "OTTHUMT00000171055.1";
chr21	HAVANA	transcript	24462350	24464153	.	-	.	gene_id "ENSG00000219368.3"; transcript_id "ENST00000406845.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZNF299P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZNF299P-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000078250.1"; havana_transcript "OTTHUMT00000171052.1";
chr21	HAVANA	transcript	24473545	24475396	.	+	.	gene_id "ENSG00000231058.1"; transcript_id "ENST00000445341.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001116.3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001116.3-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078255.1"; havana_transcript "OTTHUMT00000171057.1";
chr21	ENSEMBL	transcript	24654058	24654231	.	-	.	gene_id "ENSG00000223078.1"; transcript_id "ENST00000411146.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U2.40"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U2.40-201"; level 3;
chr21	HAVANA	transcript	24733426	24757182	.	-	.	gene_id "ENSG00000228592.1"; transcript_id "ENST00000262354.4"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000459.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000459.4-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000078246.1"; havana_transcript "OTTHUMT00000171048.1";
chr21	HAVANA	transcript	24762579	24763317	.	+	.	gene_id "ENSG00000223822.2"; transcript_id "ENST00000447052.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "EEF1A1P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "EEF1A1P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078248.1"; havana_transcript "OTTHUMT00000171050.1";
chr21	HAVANA	transcript	24779978	24781448	.	-	.	gene_id "ENSG00000237569.1"; transcript_id "ENST00000425085.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TUBAP"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "TUBAP-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078256.1"; havana_transcript "OTTHUMT00000171058.1";
chr21	ENSEMBL	transcript	24804501	24804602	.	-	.	gene_id "ENSG00000199698.1"; transcript_id "ENST00000362828.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Y_RNA.66"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Y_RNA.66-201"; level 3;
chr21	HAVANA	transcript	24849960	24863043	.	+	.	gene_id "ENSG00000227716.1"; transcript_id "ENST00000433101.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000459.7"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000459.7-001"; level 2; havana_gene "OTTHUMG00000078245.1"; havana_transcript "OTTHUMT00000171047.1";
chr21	HAVANA	transcript	25261114	25262857	.	-	.	gene_id "ENSG00000231986.1"; transcript_id "ENST00000441465.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000474.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000474.1-001"; level 2; havana_gene "OTTHUMG00000078274.1"; havana_transcript "OTTHUMT00000171079.1";
chr21	HAVANA	transcript	25333220	25339588	.	-	.	gene_id "ENSG00000235564.1"; transcript_id "ENST00000447405.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000477.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000477.2-001"; level 2; havana_gene "OTTHUMG00000078275.1"; havana_transcript "OTTHUMT00000171080.1";
chr21	HAVANA	transcript	25415572	25415941	.	+	.	gene_id "ENSG00000226996.1"; transcript_id "ENST00000415269.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000477.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000477.3-002"; level 2; havana_gene "OTTHUMG00000078273.1"; havana_transcript "OTTHUMT00000171078.1";
chr21	HAVANA	transcript	25415572	25422601	.	+	.	gene_id "ENSG00000226996.1"; transcript_id "ENST00000434859.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000477.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000477.3-001"; level 2; havana_gene "OTTHUMG00000078273.1"; havana_transcript "OTTHUMT00000171077.1";
chr21	HAVANA	transcript	25527484	25560655	.	-	.	gene_id "ENSG00000224018.1"; transcript_id "ENST00000448063.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000470.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000470.2-001"; level 2; havana_gene "OTTHUMG00000078333.1"; havana_transcript "OTTHUMT00000171147.1";
chr21	HAVANA	transcript	25676863	25693690	.	-	.	gene_id "ENSG00000224832.1"; transcript_id "ENST00000416218.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000469.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000469.2-001"; level 2; havana_gene "OTTHUMG00000078332.1"; havana_transcript "OTTHUMT00000171146.1";
chr21	HAVANA	transcript	25801054	25862621	.	+	.	gene_id "ENSG00000237484.3"; transcript_id "ENST00000453784.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000476.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000476.1-001"; level 2; havana_gene "OTTHUMG00000078326.1"; havana_transcript "OTTHUMT00000171137.1";
chr21	ENSEMBL	transcript	25801054	25862621	.	+	.	gene_id "ENSG00000237484.3"; transcript_id "ENST00000535533.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000476.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000476.1-201"; level 3; havana_gene "OTTHUMG00000078326.1";
chr21	HAVANA	transcript	25801072	25813638	.	+	.	gene_id "ENSG00000237484.3"; transcript_id "ENST00000423581.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000476.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000476.1-003"; level 2; havana_gene "OTTHUMG00000078326.1"; havana_transcript "OTTHUMT00000171139.1";
chr21	HAVANA	transcript	25801095	25920256	.	+	.	gene_id "ENSG00000237484.3"; transcript_id "ENST00000415182.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000476.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000476.1-002"; level 2; havana_gene "OTTHUMG00000078326.1"; havana_transcript "OTTHUMT00000171138.1";
chr21	HAVANA	transcript	26212864	26430059	.	+	.	gene_id "ENSG00000226983.2"; transcript_id "ENST00000441009.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000235.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000235.2-001"; level 2; havana_gene "OTTHUMG00000078331.1"; havana_transcript "OTTHUMT00000171145.1";
chr21	HAVANA	transcript	26258990	26275070	.	-	.	gene_id "ENSG00000227090.1"; transcript_id "ENST00000446404.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000402.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000402.3-001"; level 2; havana_gene "OTTHUMG00000078329.1"; havana_transcript "OTTHUMT00000171142.1";
chr21	HAVANA	transcript	26310745	26316294	.	-	.	gene_id "ENSG00000230379.1"; transcript_id "ENST00000454182.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000146.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000146.2-003"; level 2; havana_gene "OTTHUMG00000078324.1"; havana_transcript "OTTHUMT00000171135.1";
chr21	HAVANA	transcript	26310745	26324471	.	-	.	gene_id "ENSG00000230379.1"; transcript_id "ENST00000441666.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000146.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000146.2-002"; level 2; havana_gene "OTTHUMG00000078324.1"; havana_transcript "OTTHUMT00000171134.1";
chr21	HAVANA	transcript	26310745	26365129	.	-	.	gene_id "ENSG00000230379.1"; transcript_id "ENST00000444178.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000146.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000146.2-001"; level 2; havana_gene "OTTHUMG00000078324.1"; havana_transcript "OTTHUMT00000171133.1";
chr21	HAVANA	transcript	26403318	26403842	.	-	.	gene_id "ENSG00000237444.1"; transcript_id "ENST00000423389.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001342.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001342.1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000156286.1"; havana_transcript "OTTHUMT00000343746.1";
chr21	HAVANA	transcript	26427848	26442219	.	+	.	gene_id "ENSG00000244278.1"; transcript_id "ENST00000424017.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000235.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000235.3-001"; level 2; havana_gene "OTTHUMG00000078328.1"; havana_transcript "OTTHUMT00000171141.1";
chr21	HAVANA	transcript	26467335	26475983	.	+	.	gene_id "ENSG00000232512.1"; transcript_id "ENST00000453802.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000233.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000233.2-001"; level 2; havana_gene "OTTHUMG00000078330.1"; havana_transcript "OTTHUMT00000171143.1";
chr21	HAVANA	transcript	26467355	26475983	.	+	.	gene_id "ENSG00000232512.1"; transcript_id "ENST00000418942.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000233.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000233.2-002"; level 2; havana_gene "OTTHUMG00000078330.1"; havana_transcript "OTTHUMT00000171144.1";
chr21	ENSEMBL	transcript	26473445	26473728	.	+	.	gene_id "ENSG00000222567.1"; transcript_id "ENST00000410635.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "7SK.139"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "7SK.139-201"; level 3;
chr21	HAVANA	transcript	26499782	26507561	.	+	.	gene_id "ENSG00000223870.1"; transcript_id "ENST00000426609.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000233.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000233.3-001"; level 2; havana_gene "OTTHUMG00000078327.1"; havana_transcript "OTTHUMT00000171140.1";
chr21	HAVANA	transcript	26541745	26706139	.	-	.	gene_id "ENSG00000222042.1"; transcript_id "ENST00000409758.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000233.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000233.4-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000078325.3"; havana_transcript "OTTHUMT00000171136.3";
chr21	ENSEMBL	transcript	26574521	26574629	.	+	.	gene_id "ENSG00000238627.1"; transcript_id "ENST00000410986.2"; gene_type "rRNA"; gene_status "NOVEL"; gene_name "5S_rRNA.340"; transcript_type "rRNA"; transcript_status "NOVEL"; transcript_name "5S_rRNA.340-201"; level 3;
chr21	ENSEMBL	transcript	26711319	26711413	.	+	.	gene_id "ENSG00000238660.1"; transcript_id "ENST00000459545.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP001340.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP001340.1-201"; level 3;
chr21	HAVANA	transcript	26734135	26734745	.	+	.	gene_id "ENSG00000213885.3"; transcript_id "ENST00000425147.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001340.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001340.2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078369.1"; havana_transcript "OTTHUMT00000171192.1";
chr21	HAVANA	transcript	26758133	26804013	.	-	.	gene_id "ENSG00000185433.4"; transcript_id "ENST00000441013.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "NCRNA00158"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00158-001"; level 2; havana_gene "OTTHUMG00000078368.1"; havana_transcript "OTTHUMT00000171188.1";
chr21	HAVANA	transcript	26758133	26804013	.	-	.	gene_id "ENSG00000185433.4"; transcript_id "ENST00000332587.4"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "NCRNA00158"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00158-002"; level 2; havana_gene "OTTHUMG00000078368.1"; havana_transcript "OTTHUMT00000171189.1";
chr21	HAVANA	transcript	26768506	26797021	.	-	.	gene_id "ENSG00000185433.4"; transcript_id "ENST00000440205.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "NCRNA00158"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00158-004"; level 2; havana_gene "OTTHUMG00000078368.1"; havana_transcript "OTTHUMT00000171191.1";
chr21	HAVANA	transcript	26768799	26802321	.	-	.	gene_id "ENSG00000185433.4"; transcript_id "ENST00000439840.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "NCRNA00158"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00158-003"; level 2; havana_gene "OTTHUMG00000078368.1"; havana_transcript "OTTHUMT00000171190.1";
chr21	HAVANA	transcript	26825507	26839042	.	-	.	gene_id "ENSG00000243740.1"; transcript_id "ENST00000489205.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000221.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000221.2-002"; level 2; havana_gene "OTTHUMG00000159378.2"; havana_transcript "OTTHUMT00000355304.1";
chr21	HAVANA	transcript	26825507	26839042	.	-	.	gene_id "ENSG00000243740.1"; transcript_id "ENST00000468736.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000221.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000221.2-001"; level 2; havana_gene "OTTHUMG00000159378.2"; havana_transcript "OTTHUMT00000355015.2";
chr21	HAVANA	transcript	26825507	26839042	.	-	.	gene_id "ENSG00000243740.1"; transcript_id "ENST00000467945.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000221.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000221.2-003"; level 2; havana_gene "OTTHUMG00000159378.2"; havana_transcript "OTTHUMT00000355305.1";
chr21	HAVANA	transcript	26825507	26839042	.	-	.	gene_id "ENSG00000243740.1"; transcript_id "ENST00000465390.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000221.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000221.2-004"; level 2; havana_gene "OTTHUMG00000159378.2"; havana_transcript "OTTHUMT00000355306.1";
chr21	ENSEMBL	transcript	26842421	26842513	.	-	.	gene_id "ENSG00000238314.1"; transcript_id "ENST00000459023.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13.12"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.12-201"; level 3;
chr21	HAVANA	transcript	26887785	26890650	.	-	.	gene_id "ENSG00000229962.1"; transcript_id "ENST00000419694.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000221.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000221.1-001"; level 2; havana_gene "OTTHUMG00000078370.1"; havana_transcript "OTTHUMT00000171193.1";
chr21	ENSEMBL	transcript	26931716	26936957	.	-	.	gene_id "ENSG00000246147.1"; transcript_id "ENST00000501838.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "AL109616.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AL109616.1-201"; level 3;
chr21	HAVANA	transcript	26934221	26947480	.	+	.	gene_id "ENSG00000234883.1"; transcript_id "ENST00000456917.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "MIR155HG"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "MIR155HG-001"; level 2; havana_gene "OTTHUMG00000078367.1"; havana_transcript "OTTHUMT00000171187.1";
chr21	ENSEMBL	transcript	26946292	26946356	.	+	.	gene_id "ENSG00000207795.1"; transcript_id "ENST00000385060.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR155"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR155-201"; level 3;
chr21	HAVANA	transcript	26957968	26979829	.	-	.	gene_id "ENSG00000154719.9"; transcript_id "ENST00000352957.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL39-001"; level 2; tag "CCDS"; ccdsid "CCDS13573.1"; havana_gene "OTTHUMG00000078371.4"; havana_transcript "OTTHUMT00000171194.1";
chr21	HAVANA	transcript	26957968	26979829	.	-	.	gene_id "ENSG00000154719.9"; transcript_id "ENST00000307301.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL39"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPL39-002"; level 2; tag "CCDS"; ccdsid "CCDS33522.1"; havana_gene "OTTHUMG00000078371.4"; havana_transcript "OTTHUMT00000171195.2";
chr21	HAVANA	transcript	26965124	26979796	.	-	.	gene_id "ENSG00000154719.9"; transcript_id "ENST00000419219.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPL39"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MRPL39-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000078371.4"; havana_transcript "OTTHUMT00000171196.4";
chr21	HAVANA	transcript	27011584	27089874	.	+	.	gene_id "ENSG00000154721.9"; transcript_id "ENST00000480456.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "JAM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "JAM2-001"; level 2; tag "CCDS"; ccdsid "CCDS42911.1"; havana_gene "OTTHUMG00000078441.3"; havana_transcript "OTTHUMT00000171347.1";
chr21	HAVANA	transcript	27011584	27087235	.	+	.	gene_id "ENSG00000154721.9"; transcript_id "ENST00000400533.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "JAM2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "JAM2-002"; level 2; havana_gene "OTTHUMG00000078441.3"; havana_transcript "OTTHUMT00000171348.1";
chr21	HAVANA	transcript	27011584	27086885	.	+	.	gene_id "ENSG00000154721.9"; transcript_id "ENST00000400532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "JAM2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "JAM2-003"; level 2; havana_gene "OTTHUMG00000078441.3"; havana_transcript "OTTHUMT00000171349.1";
chr21	HAVANA	transcript	27011584	27087235	.	+	.	gene_id "ENSG00000154721.9"; transcript_id "ENST00000400537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "JAM2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "JAM2-004"; level 2; havana_gene "OTTHUMG00000078441.3"; havana_transcript "OTTHUMT00000171350.1";
chr21	HAVANA	transcript	27011584	27087235	.	+	.	gene_id "ENSG00000154721.9"; transcript_id "ENST00000400535.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "JAM2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "JAM2-005"; level 2; havana_gene "OTTHUMG00000078441.3"; havana_transcript "OTTHUMT00000171351.3";
chr21	ENSEMBL	transcript	27011589	27087235	.	+	.	gene_id "ENSG00000154721.9"; transcript_id "ENST00000312957.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "JAM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "JAM2-201"; level 3; havana_gene "OTTHUMG00000078441.3";
chr21	ENSEMBL	transcript	27011910	27087648	.	+	.	gene_id "ENSG00000154721.9"; transcript_id "ENST00000425221.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "JAM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "JAM2-202"; level 3; havana_gene "OTTHUMG00000078441.3";
chr21	HAVANA	transcript	27062178	27087043	.	+	.	gene_id "ENSG00000154721.9"; transcript_id "ENST00000460679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "JAM2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "JAM2-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000078441.3"; havana_transcript "OTTHUMT00000171353.3";
chr21	HAVANA	transcript	27074490	27082491	.	+	.	gene_id "ENSG00000154721.9"; transcript_id "ENST00000492962.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "JAM2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "JAM2-006"; level 2; havana_gene "OTTHUMG00000078441.3"; havana_transcript "OTTHUMT00000171352.1";
chr21	HAVANA	transcript	27083700	27087051	.	+	.	gene_id "ENSG00000154721.9"; transcript_id "ENST00000477351.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "JAM2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "JAM2-008"; level 2; havana_gene "OTTHUMG00000078441.3"; havana_transcript "OTTHUMT00000171354.1";
chr21	HAVANA	transcript	27084331	27087201	.	+	.	gene_id "ENSG00000154721.9"; transcript_id "ENST00000471689.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "JAM2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "JAM2-009"; level 2; havana_gene "OTTHUMG00000078441.3"; havana_transcript "OTTHUMT00000171355.1";
chr21	HAVANA	transcript	27015801	27016528	.	+	.	gene_id "ENSG00000237731.1"; transcript_id "ENST00000420965.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000223.41"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000223.41-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155486.1"; havana_transcript "OTTHUMT00000340299.1";
chr21	HAVANA	transcript	27064492	27064866	.	+	.	gene_id "ENSG00000227054.1"; transcript_id "ENST00000450769.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FDX1P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "FDX1P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078440.1"; havana_transcript "OTTHUMT00000171346.1";
chr21	HAVANA	transcript	27088815	27107338	.	-	.	gene_id "ENSG00000154723.8"; transcript_id "ENST00000400099.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5J"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP5J-004"; level 2; havana_gene "OTTHUMG00000078442.2"; havana_transcript "OTTHUMT00000171359.1";
chr21	HAVANA	transcript	27096791	27107215	.	-	.	gene_id "ENSG00000154723.8"; transcript_id "ENST00000400094.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5J"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP5J-007"; level 2; tag "CCDS"; ccdsid "CCDS13574.1"; havana_gene "OTTHUMG00000078442.2"; havana_transcript "OTTHUMT00000171362.1";
chr21	HAVANA	transcript	27096791	27107283	.	-	.	gene_id "ENSG00000154723.8"; transcript_id "ENST00000284971.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5J"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP5J-001"; level 2; tag "CCDS"; ccdsid "CCDS13574.1"; havana_gene "OTTHUMG00000078442.2"; havana_transcript "OTTHUMT00000171356.1";
chr21	HAVANA	transcript	27096791	27107344	.	-	.	gene_id "ENSG00000154723.8"; transcript_id "ENST00000457143.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5J"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP5J-003"; level 2; tag "CCDS"; ccdsid "CCDS46637.1"; havana_gene "OTTHUMG00000078442.2"; havana_transcript "OTTHUMT00000171358.2";
chr21	HAVANA	transcript	27096791	27107950	.	-	.	gene_id "ENSG00000154723.8"; transcript_id "ENST00000400090.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5J"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP5J-005"; level 2; tag "CCDS"; ccdsid "CCDS13574.1"; havana_gene "OTTHUMG00000078442.2"; havana_transcript "OTTHUMT00000171360.1";
chr21	HAVANA	transcript	27096791	27107957	.	-	.	gene_id "ENSG00000154723.8"; transcript_id "ENST00000400087.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5J"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP5J-006"; level 2; tag "CCDS"; ccdsid "CCDS13574.1"; havana_gene "OTTHUMG00000078442.2"; havana_transcript "OTTHUMT00000171361.1";
chr21	HAVANA	transcript	27096791	27107984	.	-	.	gene_id "ENSG00000154723.8"; transcript_id "ENST00000400093.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5J"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP5J-002"; level 2; tag "CCDS"; ccdsid "CCDS13574.1"; havana_gene "OTTHUMG00000078442.2"; havana_transcript "OTTHUMT00000171357.1";
chr21	HAVANA	transcript	27097009	27107215	.	-	.	gene_id "ENSG00000154723.8"; transcript_id "ENST00000486002.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5J"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP5J-008"; level 2; havana_gene "OTTHUMG00000078442.2"; havana_transcript "OTTHUMT00000171363.1";
chr21	HAVANA	transcript	27106881	27144771	.	+	.	gene_id "ENSG00000154727.6"; transcript_id "ENST00000354828.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GABPA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GABPA-002"; level 2; tag "CCDS"; ccdsid "CCDS13575.1"; havana_gene "OTTHUMG00000078443.1"; havana_transcript "OTTHUMT00000171365.1";
chr21	HAVANA	transcript	27107695	27144771	.	+	.	gene_id "ENSG00000154727.6"; transcript_id "ENST00000400075.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GABPA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GABPA-001"; level 2; tag "CCDS"; ccdsid "CCDS13575.1"; havana_gene "OTTHUMG00000078443.1"; havana_transcript "OTTHUMT00000171364.1";
chr21	HAVANA	transcript	27107700	27124659	.	+	.	gene_id "ENSG00000154727.6"; transcript_id "ENST00000487266.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GABPA"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GABPA-003"; level 2; havana_gene "OTTHUMG00000078443.1"; havana_transcript "OTTHUMT00000171366.1";
chr21	HAVANA	transcript	27135249	27135644	.	-	.	gene_id "ENSG00000235514.1"; transcript_id "ENST00000436405.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000226.9"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000226.9-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078439.1"; havana_transcript "OTTHUMT00000171345.1";
chr21	HAVANA	transcript	27252861	27542972	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000346798.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "APP-004"; level 2; tag "CCDS"; ccdsid "CCDS13576.1"; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171340.1";
chr21	HAVANA	transcript	27252861	27543065	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000354192.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "APP-002"; level 2; tag "CCDS"; ccdsid "CCDS46638.1"; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171338.1";
chr21	HAVANA	transcript	27252861	27543085	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000348990.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "APP-003"; level 2; tag "CCDS"; ccdsid "CCDS13577.1"; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171339.1";
chr21	HAVANA	transcript	27252861	27543105	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000357903.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "APP-001"; level 2; tag "CCDS"; ccdsid "CCDS33523.1"; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171337.2";
chr21	ENSEMBL	transcript	27252862	27543138	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000358918.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "APP-201"; level 3; havana_gene "OTTHUMG00000078438.6";
chr21	ENSEMBL	transcript	27252862	27543138	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000359726.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "APP-202"; level 3; havana_gene "OTTHUMG00000078438.6";
chr21	ENSEMBL	transcript	27253356	27543085	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000452232.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "APP-205"; level 3; havana_gene "OTTHUMG00000078438.6";
chr21	ENSEMBL	transcript	27253638	27543446	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000448388.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "APP-204"; level 3; havana_gene "OTTHUMG00000078438.6";
chr21	ENSEMBL	transcript	27253642	27512669	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000440126.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "APP-203"; level 3; havana_gene "OTTHUMG00000078438.6";
chr21	HAVANA	transcript	27253643	27542972	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000439274.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "APP-015"; level 2; tag "CCDS"; ccdsid "CCDS46639.1"; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000376685.1";
chr21	HAVANA	transcript	27253742	27348326	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000456209.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "APP-011"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171416.2";
chr21	HAVANA	transcript	27253825	27270295	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000464867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "APP-012"; level 2; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171417.2";
chr21	HAVANA	transcript	27317839	27462377	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000448850.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "APP-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171341.1";
chr21	HAVANA	transcript	27347503	27423348	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000415997.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "APP-010"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171415.1";
chr21	HAVANA	transcript	27369503	27423334	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000491395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "APP-009"; level 2; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171414.2";
chr21	HAVANA	transcript	27381911	27543064	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000474136.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "APP-013"; level 2; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171418.2";
chr21	HAVANA	transcript	27394238	27425818	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000463070.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "APP-008"; level 2; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171344.2";
chr21	HAVANA	transcript	27461827	27484400	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000462267.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "APP-007"; level 2; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171343.1";
chr21	HAVANA	transcript	27484302	27541747	.	-	.	gene_id "ENSG00000142192.13"; transcript_id "ENST00000466453.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "APP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "APP-006"; level 2; havana_gene "OTTHUMG00000078438.6"; havana_transcript "OTTHUMT00000171342.1";
chr21	HAVANA	transcript	27306612	27307584	.	+	.	gene_id "ENSG00000233783.1"; transcript_id "ENST00000456904.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001442.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001442.2-001"; level 2; havana_gene "OTTHUMG00000078483.1"; havana_transcript "OTTHUMT00000171424.1";
chr21	ENSEMBL	transcript	27315359	27315460	.	-	.	gene_id "ENSG00000251972.1"; transcript_id "ENST00000516163.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.1035"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.1035-201"; level 3;
chr21	HAVANA	transcript	27530409	27548142	.	+	.	gene_id "ENSG00000224541.1"; transcript_id "ENST00000455275.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001439.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001439.2-001"; level 2; havana_gene "OTTHUMG00000078481.1"; havana_transcript "OTTHUMT00000171422.1";
chr21	ENSEMBL	transcript	27563026	27563132	.	+	.	gene_id "ENSG00000206802.1"; transcript_id "ENST00000384075.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.470"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.470-201"; level 3;
chr21	HAVANA	transcript	27722099	27722953	.	-	.	gene_id "ENSG00000229025.1"; transcript_id "ENST00000435878.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001595.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001595.1-001"; level 2; havana_gene "OTTHUMG00000078482.1"; havana_transcript "OTTHUMT00000171423.1";
chr21	HAVANA	transcript	27750871	27843421	.	+	.	gene_id "ENSG00000232692.1"; transcript_id "ENST00000429340.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001596.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001596.6-003"; level 2; tag "not_organism-supported"; havana_gene "OTTHUMG00000078661.2"; havana_transcript "OTTHUMT00000171618.1";
chr21	HAVANA	transcript	27760045	27790406	.	+	.	gene_id "ENSG00000232692.1"; transcript_id "ENST00000452460.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001596.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001596.6-001"; level 2; havana_gene "OTTHUMG00000078661.2"; havana_transcript "OTTHUMT00000171616.1";
chr21	HAVANA	transcript	27762455	27844017	.	+	.	gene_id "ENSG00000232692.1"; transcript_id "ENST00000421771.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001596.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001596.6-002"; level 2; havana_gene "OTTHUMG00000078661.2"; havana_transcript "OTTHUMT00000171617.1";
chr21	HAVANA	transcript	27788828	27843517	.	+	.	gene_id "ENSG00000232692.1"; transcript_id "ENST00000444306.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001596.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001596.6-004"; level 2; tag "not_organism-supported"; havana_gene "OTTHUMG00000078661.2"; havana_transcript "OTTHUMT00000171645.1";
chr21	HAVANA	transcript	27765954	27890912	.	+	.	gene_id "ENSG00000197934.4"; transcript_id "ENST00000414486.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001597.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001597.1-002"; level 2; havana_gene "OTTHUMG00000078660.1"; havana_transcript "OTTHUMT00000171615.1";
chr21	HAVANA	transcript	27778262	27941571	.	+	.	gene_id "ENSG00000197934.4"; transcript_id "ENST00000357401.3"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001597.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001597.1-001"; level 2; havana_gene "OTTHUMG00000078660.1"; havana_transcript "OTTHUMT00000171614.1";
chr21	HAVANA	transcript	27838528	27945603	.	-	.	gene_id "ENSG00000166265.7"; transcript_id "ENST00000299340.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CYYR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CYYR1-001"; level 2; tag "CCDS"; ccdsid "CCDS13578.1"; havana_gene "OTTHUMG00000078689.2"; havana_transcript "OTTHUMT00000171654.2";
chr21	ENSEMBL	transcript	27840487	27945603	.	-	.	gene_id "ENSG00000166265.7"; transcript_id "ENST00000435845.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CYYR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CYYR1-201"; level 3; havana_gene "OTTHUMG00000078689.2";
chr21	HAVANA	transcript	27850290	27945495	.	-	.	gene_id "ENSG00000166265.7"; transcript_id "ENST00000400043.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CYYR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CYYR1-002"; level 2; havana_gene "OTTHUMG00000078689.2"; havana_transcript "OTTHUMT00000171655.2";
chr21	HAVANA	transcript	28208606	28214030	.	-	.	gene_id "ENSG00000154734.8"; transcript_id "ENST00000464589.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADAMTS1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ADAMTS1-002"; level 2; havana_gene "OTTHUMG00000078688.2"; havana_transcript "OTTHUMT00000171651.1";
chr21	HAVANA	transcript	28208606	28217728	.	-	.	gene_id "ENSG00000154734.8"; transcript_id "ENST00000284984.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADAMTS1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADAMTS1-001"; level 2; tag "CCDS"; ccdsid "CCDS33524.1"; havana_gene "OTTHUMG00000078688.2"; havana_transcript "OTTHUMT00000171650.1";
chr21	ENSEMBL	transcript	28208608	28216096	.	-	.	gene_id "ENSG00000154734.8"; transcript_id "ENST00000382884.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADAMTS1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADAMTS1-201"; level 3; havana_gene "OTTHUMG00000078688.2";
chr21	HAVANA	transcript	28210412	28212808	.	-	.	gene_id "ENSG00000154734.8"; transcript_id "ENST00000492656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADAMTS1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ADAMTS1-004"; level 2; havana_gene "OTTHUMG00000078688.2"; havana_transcript "OTTHUMT00000171653.1";
chr21	HAVANA	transcript	28213396	28215337	.	-	.	gene_id "ENSG00000154734.8"; transcript_id "ENST00000517777.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADAMTS1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ADAMTS1-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000078688.2"; havana_transcript "OTTHUMT00000381380.1";
chr21	HAVANA	transcript	28213439	28215859	.	-	.	gene_id "ENSG00000154734.8"; transcript_id "ENST00000451462.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADAMTS1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ADAMTS1-003"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000078688.2"; havana_transcript "OTTHUMT00000171652.1";
chr21	HAVANA	transcript	28214288	28216096	.	-	.	gene_id "ENSG00000154734.8"; transcript_id "ENST00000517452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADAMTS1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ADAMTS1-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000078688.2"; havana_transcript "OTTHUMT00000381381.1";
chr21	HAVANA	transcript	28261695	28312061	.	+	.	gene_id "ENSG00000223563.1"; transcript_id "ENST00000426771.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001601.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001601.2-001"; level 2; havana_gene "OTTHUMG00000078687.1"; havana_transcript "OTTHUMT00000171649.1";
chr21	HAVANA	transcript	28290231	28338832	.	-	.	gene_id "ENSG00000154736.5"; transcript_id "ENST00000284987.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADAMTS5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADAMTS5-001"; level 2; tag "CCDS"; ccdsid "CCDS13579.1"; havana_gene "OTTHUMG00000078686.1"; havana_transcript "OTTHUMT00000171648.1";
chr21	HAVANA	transcript	28515663	28516268	.	-	.	gene_id "ENSG00000215326.3"; transcript_id "ENST00000429271.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GPX1P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "GPX1P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078697.1"; havana_transcript "OTTHUMT00000171663.1";
chr21	HAVANA	transcript	28731204	28820898	.	-	.	gene_id "ENSG00000231236.2"; transcript_id "ENST00000420186.2"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001604.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001604.3-001"; level 2; havana_gene "OTTHUMG00000078699.2"; havana_transcript "OTTHUMT00000171665.2";
chr21	HAVANA	transcript	28733483	28768106	.	+	.	gene_id "ENSG00000236332.1"; transcript_id "ENST00000447384.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001605.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001605.4-001"; level 2; havana_gene "OTTHUMG00000078698.1"; havana_transcript "OTTHUMT00000171664.1";
chr21	HAVANA	transcript	28739333	28740266	.	-	.	gene_id "ENSG00000233300.1"; transcript_id "ENST00000420241.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "EIF4A1P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "EIF4A1P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078696.1"; havana_transcript "OTTHUMT00000171662.1";
chr21	HAVANA	transcript	28792699	28793342	.	-	.	gene_id "ENSG00000217026.3"; transcript_id "ENST00000447844.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPL10P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPL10P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078695.1"; havana_transcript "OTTHUMT00000171661.1";
chr21	HAVANA	transcript	28864437	28864580	.	+	.	gene_id "ENSG00000219592.2"; transcript_id "ENST00000406229.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001605.6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001605.6-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000078705.2"; havana_transcript "OTTHUMT00000171678.2";
chr21	HAVANA	transcript	29011012	29025810	.	+	.	gene_id "ENSG00000234052.1"; transcript_id "ENST00000426418.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001607.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001607.1-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000078707.1"; havana_transcript "OTTHUMT00000171682.1";
chr21	HAVANA	transcript	29094698	29123552	.	+	.	gene_id "ENSG00000225298.1"; transcript_id "ENST00000411460.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00113"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00113-001"; level 2; havana_gene "OTTHUMG00000078708.1"; havana_transcript "OTTHUMT00000171683.1";
chr21	HAVANA	transcript	29094717	29123552	.	+	.	gene_id "ENSG00000225298.1"; transcript_id "ENST00000425376.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00113"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00113-002"; level 2; havana_gene "OTTHUMG00000078708.1"; havana_transcript "OTTHUMT00000171684.1";
chr21	HAVANA	transcript	29097118	29123552	.	+	.	gene_id "ENSG00000225298.1"; transcript_id "ENST00000442550.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00113"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00113-003"; level 2; havana_gene "OTTHUMG00000078708.1"; havana_transcript "OTTHUMT00000171685.1";
chr21	HAVANA	transcript	29327240	29357614	.	+	.	gene_id "ENSG00000234083.1"; transcript_id "ENST00000433344.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AJ006995.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AJ006995.3-001"; level 2; havana_gene "OTTHUMG00000074159.1"; havana_transcript "OTTHUMT00000157552.1";
chr21	HAVANA	transcript	29385682	29395552	.	+	.	gene_id "ENSG00000178457.3"; transcript_id "ENST00000324988.3"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf94"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf94-001"; level 2; havana_gene "OTTHUMG00000074158.1"; havana_transcript "OTTHUMT00000157551.1";
chr21	HAVANA	transcript	29420733	29509930	.	+	.	gene_id "ENSG00000232079.1"; transcript_id "ENST00000426534.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL035610.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL035610.1-001"; level 2; havana_gene "OTTHUMG00000078709.1"; havana_transcript "OTTHUMT00000171686.1";
chr21	HAVANA	transcript	29420766	29475899	.	+	.	gene_id "ENSG00000232079.1"; transcript_id "ENST00000458316.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL035610.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL035610.1-004"; level 2; havana_gene "OTTHUMG00000078709.1"; havana_transcript "OTTHUMT00000171689.1";
chr21	HAVANA	transcript	29462633	29475109	.	+	.	gene_id "ENSG00000232079.1"; transcript_id "ENST00000423808.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL035610.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL035610.1-003"; level 2; havana_gene "OTTHUMG00000078709.1"; havana_transcript "OTTHUMT00000171688.1";
chr21	HAVANA	transcript	29462764	29475559	.	+	.	gene_id "ENSG00000232079.1"; transcript_id "ENST00000436878.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL035610.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL035610.1-002"; level 2; havana_gene "OTTHUMG00000078709.1"; havana_transcript "OTTHUMT00000171687.1";
chr21	HAVANA	transcript	29488413	29600986	.	-	.	gene_id "ENSG00000236532.1"; transcript_id "ENST00000453420.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL035610.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL035610.2-001"; level 2; havana_gene "OTTHUMG00000078706.1"; havana_transcript "OTTHUMT00000171679.1";
chr21	HAVANA	transcript	29535921	29542462	.	-	.	gene_id "ENSG00000236532.1"; transcript_id "ENST00000433303.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL035610.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AL035610.2-002"; level 2; havana_gene "OTTHUMG00000078706.1"; havana_transcript "OTTHUMT00000171680.1";
chr21	HAVANA	transcript	29584625	29600799	.	-	.	gene_id "ENSG00000236532.1"; transcript_id "ENST00000437194.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL035610.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL035610.2-003"; level 2; havana_gene "OTTHUMG00000078706.1"; havana_transcript "OTTHUMT00000171681.1";
chr21	HAVANA	transcript	29816870	30047170	.	-	.	gene_id "ENSG00000232855.1"; transcript_id "ENST00000433310.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF131217.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF131217.1-001"; level 2; havana_gene "OTTHUMG00000078747.1"; havana_transcript "OTTHUMT00000171732.1";
chr21	HAVANA	transcript	29816870	29998926	.	-	.	gene_id "ENSG00000232855.1"; transcript_id "ENST00000430247.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF131217.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF131217.1-002"; level 2; havana_gene "OTTHUMG00000078747.1"; havana_transcript "OTTHUMT00000171733.1";
chr21	HAVANA	transcript	30043303	30047095	.	-	.	gene_id "ENSG00000232855.1"; transcript_id "ENST00000452028.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF131217.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF131217.1-003"; level 2; havana_gene "OTTHUMG00000078747.1"; havana_transcript "OTTHUMT00000171734.1";
chr21	HAVANA	transcript	29911640	29912677	.	+	.	gene_id "ENSG00000226935.2"; transcript_id "ENST00000412526.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00161"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00161-001"; level 2; havana_gene "OTTHUMG00000078748.1"; havana_transcript "OTTHUMT00000171735.1";
chr21	HAVANA	transcript	29911640	29912677	.	+	.	gene_id "ENSG00000226935.2"; transcript_id "ENST00000455939.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00161"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00161-002"; level 2; havana_gene "OTTHUMG00000078748.1"; havana_transcript "OTTHUMT00000171736.1";
chr21	ENSEMBL	transcript	30115530	30115613	.	+	.	gene_id "ENSG00000251894.1"; transcript_id "ENST00000516085.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.1011"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.1011-201"; level 3;
chr21	HAVANA	transcript	30244513	30257693	.	-	.	gene_id "ENSG00000156239.7"; transcript_id "ENST00000303775.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "N6AMT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "N6AMT1-001"; level 2; tag "CCDS"; ccdsid "CCDS33526.1"; havana_gene "OTTHUMG00000078750.3"; havana_transcript "OTTHUMT00000171738.1";
chr21	HAVANA	transcript	30244513	30257693	.	-	.	gene_id "ENSG00000156239.7"; transcript_id "ENST00000351429.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "N6AMT1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "N6AMT1-002"; level 2; tag "CCDS"; ccdsid "CCDS33525.1"; havana_gene "OTTHUMG00000078750.3"; havana_transcript "OTTHUMT00000171739.1";
chr21	HAVANA	transcript	30244513	30257693	.	-	.	gene_id "ENSG00000156239.7"; transcript_id "ENST00000460212.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "N6AMT1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "N6AMT1-003"; level 2; tag "CCDS"; ccdsid "CCDS33526.1"; havana_gene "OTTHUMG00000078750.3"; havana_transcript "OTTHUMT00000171740.3";
chr21	HAVANA	transcript	30259602	30261594	.	-	.	gene_id "ENSG00000215005.2"; transcript_id "ENST00000447985.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "HSPD1P7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "HSPD1P7-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078751.1"; havana_transcript "OTTHUMT00000171741.1";
chr21	HAVANA	transcript	30274101	30276019	.	-	.	gene_id "ENSG00000215317.2"; transcript_id "ENST00000400014.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "THUMPD1P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "THUMPD1P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078749.1"; havana_transcript "OTTHUMT00000171737.1";
chr21	HAVANA	transcript	30300466	30365270	.	-	.	gene_id "ENSG00000198862.7"; transcript_id "ENST00000389194.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LTN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LTN1-001"; level 2; havana_gene "OTTHUMG00000078803.2"; havana_transcript "OTTHUMT00000171851.1";
chr21	ENSEMBL	transcript	30300466	30365277	.	-	.	gene_id "ENSG00000198862.7"; transcript_id "ENST00000361371.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LTN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LTN1-201"; level 3; tag "CCDS"; ccdsid "CCDS33527.1"; havana_gene "OTTHUMG00000078803.2";
chr21	ENSEMBL	transcript	30300466	30365277	.	-	.	gene_id "ENSG00000198862.7"; transcript_id "ENST00000446611.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LTN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LTN1-202"; level 3; havana_gene "OTTHUMG00000078803.2";
chr21	HAVANA	transcript	30330728	30332184	.	-	.	gene_id "ENSG00000198862.7"; transcript_id "ENST00000486427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LTN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LTN1-006"; level 2; havana_gene "OTTHUMG00000078803.2"; havana_transcript "OTTHUMT00000171856.1";
chr21	HAVANA	transcript	30330772	30333143	.	-	.	gene_id "ENSG00000198862.7"; transcript_id "ENST00000475344.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LTN1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "LTN1-005"; level 2; havana_gene "OTTHUMG00000078803.2"; havana_transcript "OTTHUMT00000171855.1";
chr21	HAVANA	transcript	30333639	30365270	.	-	.	gene_id "ENSG00000198862.7"; transcript_id "ENST00000389195.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LTN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LTN1-002"; level 2; havana_gene "OTTHUMG00000078803.2"; havana_transcript "OTTHUMT00000171852.1";
chr21	HAVANA	transcript	30339217	30359082	.	-	.	gene_id "ENSG00000198862.7"; transcript_id "ENST00000483326.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LTN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LTN1-004"; level 2; havana_gene "OTTHUMG00000078803.2"; havana_transcript "OTTHUMT00000171854.1";
chr21	HAVANA	transcript	30369934	30370354	.	-	.	gene_id "ENSG00000176054.6"; transcript_id "ENST00000320371.6"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPL23P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPL23P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078804.1"; havana_transcript "OTTHUMT00000171857.1";
chr21	HAVANA	transcript	30376705	30391699	.	-	.	gene_id "ENSG00000156253.2"; transcript_id "ENST00000493196.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RWDD2B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RWDD2B-001"; level 2; tag "CCDS"; ccdsid "CCDS13582.1"; havana_gene "OTTHUMG00000078805.2"; havana_transcript "OTTHUMT00000171858.1";
chr21	HAVANA	transcript	30378080	30391671	.	-	.	gene_id "ENSG00000156253.2"; transcript_id "ENST00000486719.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RWDD2B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RWDD2B-004"; level 2; havana_gene "OTTHUMG00000078805.2"; havana_transcript "OTTHUMT00000171861.2";
chr21	HAVANA	transcript	30378080	30391673	.	-	.	gene_id "ENSG00000156253.2"; transcript_id "ENST00000286777.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RWDD2B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RWDD2B-002"; level 2; havana_gene "OTTHUMG00000078805.2"; havana_transcript "OTTHUMT00000171859.2";
chr21	HAVANA	transcript	30378080	30391680	.	-	.	gene_id "ENSG00000156253.2"; transcript_id "ENST00000472184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RWDD2B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RWDD2B-003"; level 2; havana_gene "OTTHUMG00000078805.2"; havana_transcript "OTTHUMT00000171860.1";
chr21	HAVANA	transcript	30380197	30391627	.	-	.	gene_id "ENSG00000156253.2"; transcript_id "ENST00000466746.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RWDD2B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RWDD2B-007"; level 2; havana_gene "OTTHUMG00000078805.2"; havana_transcript "OTTHUMT00000171864.1";
chr21	HAVANA	transcript	30380221	30391661	.	-	.	gene_id "ENSG00000156253.2"; transcript_id "ENST00000481411.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RWDD2B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RWDD2B-006"; level 2; havana_gene "OTTHUMG00000078805.2"; havana_transcript "OTTHUMT00000171863.1";
chr21	HAVANA	transcript	30380385	30391681	.	-	.	gene_id "ENSG00000156253.2"; transcript_id "ENST00000471269.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RWDD2B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RWDD2B-005"; level 2; havana_gene "OTTHUMG00000078805.2"; havana_transcript "OTTHUMT00000171862.1";
chr21	HAVANA	transcript	30396950	30426809	.	+	.	gene_id "ENSG00000156256.10"; transcript_id "ENST00000399975.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP16"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP16-001"; level 2; tag "CCDS"; ccdsid "CCDS42912.1"; havana_gene "OTTHUMG00000078802.1"; havana_transcript "OTTHUMT00000171845.1";
chr21	HAVANA	transcript	30396950	30426809	.	+	.	gene_id "ENSG00000156256.10"; transcript_id "ENST00000399976.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP16"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP16-002"; level 2; tag "CCDS"; ccdsid "CCDS13583.1"; havana_gene "OTTHUMG00000078802.1"; havana_transcript "OTTHUMT00000171846.1";
chr21	HAVANA	transcript	30396972	30426809	.	+	.	gene_id "ENSG00000156256.10"; transcript_id "ENST00000334352.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP16"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP16-003"; level 2; tag "CCDS"; ccdsid "CCDS13583.1"; havana_gene "OTTHUMG00000078802.1"; havana_transcript "OTTHUMT00000171847.1";
chr21	HAVANA	transcript	30396972	30426809	.	+	.	gene_id "ENSG00000156256.10"; transcript_id "ENST00000474835.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP16"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "USP16-004"; level 2; havana_gene "OTTHUMG00000078802.1"; havana_transcript "OTTHUMT00000171848.1";
chr21	HAVANA	transcript	30396977	30407240	.	+	.	gene_id "ENSG00000156256.10"; transcript_id "ENST00000399973.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP16"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP16-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000078802.1"; havana_transcript "OTTHUMT00000171850.1";
chr21	ENSEMBL	transcript	30397016	30426561	.	+	.	gene_id "ENSG00000156256.10"; transcript_id "ENST00000535828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP16"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "USP16-201"; level 3; havana_gene "OTTHUMG00000078802.1";
chr21	HAVANA	transcript	30424444	30426809	.	+	.	gene_id "ENSG00000156256.10"; transcript_id "ENST00000485067.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "USP16"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "USP16-005"; level 2; havana_gene "OTTHUMG00000078802.1"; havana_transcript "OTTHUMT00000171849.1";
chr21	HAVANA	transcript	30428126	30433697	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000432178.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCT8-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000044595.3"; havana_transcript "OTTHUMT00000104070.2";
chr21	HAVANA	transcript	30428645	30435188	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000496121.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CCT8-005"; level 2; havana_gene "OTTHUMG00000044595.3"; havana_transcript "OTTHUMT00000171824.1";
chr21	HAVANA	transcript	30428645	30445960	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000470450.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CCT8-004"; level 2; havana_gene "OTTHUMG00000044595.3"; havana_transcript "OTTHUMT00000171823.2";
chr21	HAVANA	transcript	30428645	30446118	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000389159.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCT8-002"; level 2; havana_gene "OTTHUMG00000044595.3"; havana_transcript "OTTHUMT00000171821.1";
chr21	HAVANA	transcript	30428645	30446118	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000286788.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCT8-003"; level 2; tag "CCDS"; ccdsid "CCDS33528.1"; havana_gene "OTTHUMG00000044595.3"; havana_transcript "OTTHUMT00000171822.1";
chr21	ENSEMBL	transcript	30428650	30445672	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000542732.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCT8-202"; level 3; havana_gene "OTTHUMG00000044595.3";
chr21	ENSEMBL	transcript	30428650	30445972	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000540844.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CCT8-201"; level 3; havana_gene "OTTHUMG00000044595.3";
chr21	HAVANA	transcript	30434449	30435058	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000480359.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CCT8-010"; level 2; havana_gene "OTTHUMG00000044595.3"; havana_transcript "OTTHUMT00000171829.1";
chr21	HAVANA	transcript	30434490	30435789	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000475205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CCT8-011"; level 2; havana_gene "OTTHUMG00000044595.3"; havana_transcript "OTTHUMT00000171830.1";
chr21	HAVANA	transcript	30434530	30445886	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000431234.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CCT8-006"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000044595.3"; havana_transcript "OTTHUMT00000171825.1";
chr21	HAVANA	transcript	30437381	30445936	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000484403.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CCT8-008"; level 2; havana_gene "OTTHUMG00000044595.3"; havana_transcript "OTTHUMT00000171827.1";
chr21	HAVANA	transcript	30437397	30444557	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000481059.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CCT8-007"; level 2; havana_gene "OTTHUMG00000044595.3"; havana_transcript "OTTHUMT00000171826.1";
chr21	HAVANA	transcript	30439911	30445753	.	-	.	gene_id "ENSG00000156261.7"; transcript_id "ENST00000494296.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CCT8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CCT8-009"; level 2; havana_gene "OTTHUMG00000044595.3"; havana_transcript "OTTHUMT00000171828.1";
chr21	HAVANA	transcript	30430394	30431977	.	-	.	gene_id "ENSG00000231125.1"; transcript_id "ENST00000457162.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF129075.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF129075.5-001"; level 2; havana_gene "OTTHUMG00000078807.1"; havana_transcript "OTTHUMT00000171870.1";
chr21	HAVANA	transcript	30449792	30482112	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000496779.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf7-014"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000340170.1";
chr21	HAVANA	transcript	30449796	30463897	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000419845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf7-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171960.5";
chr21	ENSEMBL	transcript	30449812	30547751	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000545939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf7-202"; level 3; havana_gene "OTTHUMG00000078806.6";
chr21	HAVANA	transcript	30449817	30474961	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000492930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf7-007"; level 2; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171959.2";
chr21	HAVANA	transcript	30449954	30548210	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000341618.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf7-002"; level 2; tag "CCDS"; ccdsid "CCDS13584.1"; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171866.1";
chr21	HAVANA	transcript	30449954	30548210	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000399935.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf7-003"; level 2; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171867.2";
chr21	HAVANA	transcript	30449954	30548210	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000399934.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf7-004"; level 2; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171868.2";
chr21	ENSEMBL	transcript	30449954	30548208	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000286791.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf7-201"; level 3; havana_gene "OTTHUMG00000078806.6";
chr21	HAVANA	transcript	30452873	30548210	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000399947.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf7-001"; level 2; tag "CCDS"; ccdsid "CCDS13584.1"; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171865.2";
chr21	HAVANA	transcript	30464575	30548210	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000339024.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf7-005"; level 2; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171869.2";
chr21	HAVANA	transcript	30494376	30547350	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000460883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf7-009"; level 2; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171961.1";
chr21	HAVANA	transcript	30502806	30548210	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000399928.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf7-006"; level 2; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171958.1";
chr21	HAVANA	transcript	30502959	30547335	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000399926.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf7-010"; level 2; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171962.1";
chr21	HAVANA	transcript	30503282	30547347	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000399925.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf7-011"; level 2; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171963.1";
chr21	HAVANA	transcript	30503578	30547066	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000451489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf7-012"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171964.1";
chr21	HAVANA	transcript	30517880	30547540	.	+	.	gene_id "ENSG00000156265.11"; transcript_id "ENST00000470800.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf7-013"; level 2; havana_gene "OTTHUMG00000078806.6"; havana_transcript "OTTHUMT00000171965.1";
chr21	HAVANA	transcript	30500022	30500509	.	-	.	gene_id "ENSG00000232687.1"; transcript_id "ENST00000412942.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AF129075.18"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AF129075.18-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000155485.2"; havana_transcript "OTTHUMT00000340297.2";
chr21	ENSEMBL	transcript	30511604	30511705	.	-	.	gene_id "ENSG00000201984.1"; transcript_id "ENST00000365114.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Y_RNA.360"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Y_RNA.360-201"; level 3;
chr21	ENSEMBL	transcript	30552747	30552960	.	-	.	gene_id "ENSG00000212479.1"; transcript_id "ENST00000391177.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "U3.34"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "U3.34-201"; level 3;
chr21	HAVANA	transcript	30554348	30560116	.	-	.	gene_id "ENSG00000224649.1"; transcript_id "ENST00000430001.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF124730.4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF124730.4-001"; level 2; havana_gene "OTTHUMG00000078877.1"; havana_transcript "OTTHUMT00000171972.1";
chr21	HAVANA	transcript	30565801	30660526	.	+	.	gene_id "ENSG00000215533.4"; transcript_id "ENST00000447125.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00189"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00189-003"; level 2; havana_gene "OTTHUMG00000078876.1"; havana_transcript "OTTHUMT00000171971.1";
chr21	ENSEMBL	transcript	30565801	30660526	.	+	.	gene_id "ENSG00000215533.4"; transcript_id "ENST00000545936.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00189"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00189-201"; level 3; havana_gene "OTTHUMG00000078876.1";
chr21	HAVANA	transcript	30565815	30660526	.	+	.	gene_id "ENSG00000215533.4"; transcript_id "ENST00000420364.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00189"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00189-001"; level 2; havana_gene "OTTHUMG00000078876.1"; havana_transcript "OTTHUMT00000171969.1";
chr21	HAVANA	transcript	30566358	30656528	.	+	.	gene_id "ENSG00000215533.4"; transcript_id "ENST00000431661.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00189"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00189-002"; level 2; havana_gene "OTTHUMG00000078876.1"; havana_transcript "OTTHUMT00000171970.1";
chr21	HAVANA	transcript	30594642	30595578	.	+	.	gene_id "ENSG00000236056.1"; transcript_id "ENST00000450472.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "GAPDHP14"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "GAPDHP14-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000078875.1"; havana_transcript "OTTHUMT00000171968.1";
chr21	HAVANA	transcript	30671192	30718469	.	+	.	gene_id "ENSG00000156273.9"; transcript_id "ENST00000286800.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACH1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BACH1-001"; level 2; tag "CCDS"; ccdsid "CCDS13585.1"; havana_gene "OTTHUMG00000078878.6"; havana_transcript "OTTHUMT00000171973.1";
chr21	HAVANA	transcript	30671737	30718469	.	+	.	gene_id "ENSG00000156273.9"; transcript_id "ENST00000399921.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACH1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BACH1-002"; level 2; tag "CCDS"; ccdsid "CCDS13585.1"; havana_gene "OTTHUMG00000078878.6"; havana_transcript "OTTHUMT00000171974.1";
chr21	HAVANA	transcript	30672454	30698819	.	+	.	gene_id "ENSG00000156273.9"; transcript_id "ENST00000451655.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACH1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BACH1-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000078878.6"; havana_transcript "OTTHUMT00000171976.1";
chr21	HAVANA	transcript	30673123	30698805	.	+	.	gene_id "ENSG00000156273.9"; transcript_id "ENST00000447177.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACH1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BACH1-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000078878.6"; havana_transcript "OTTHUMT00000171977.1";
chr21	HAVANA	transcript	30677524	30698657	.	+	.	gene_id "ENSG00000156273.9"; transcript_id "ENST00000435072.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACH1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BACH1-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000078878.6"; havana_transcript "OTTHUMT00000171975.1";
chr21	HAVANA	transcript	30699450	31003071	.	+	.	gene_id "ENSG00000156273.9"; transcript_id "ENST00000422809.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACH1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BACH1-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000078878.6"; havana_transcript "OTTHUMT00000182248.1";
chr21	HAVANA	transcript	30699597	31003071	.	+	.	gene_id "ENSG00000156273.9"; transcript_id "ENST00000468059.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACH1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BACH1-007"; level 2; havana_gene "OTTHUMG00000078878.6"; havana_transcript "OTTHUMT00000182249.2";
chr21	HAVANA	transcript	30968360	31003067	.	+	.	gene_id "ENSG00000156273.9"; transcript_id "ENST00000462262.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACH1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BACH1-008"; level 2; havana_gene "OTTHUMG00000078878.6"; havana_transcript "OTTHUMT00000182250.1";
chr21	HAVANA	transcript	30723955	30734215	.	+	.	gene_id "ENSG00000248476.1"; transcript_id "ENST00000504298.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000240.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000240.4-001"; level 2; havana_gene "OTTHUMG00000078881.1"; havana_transcript "OTTHUMT00000171988.1";
chr21	HAVANA	transcript	30742340	30743547	.	-	.	gene_id "ENSG00000232118.1"; transcript_id "ENST00000449923.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000240.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000240.5-001"; level 2; havana_gene "OTTHUMG00000081874.2"; havana_transcript "OTTHUMT00000182262.2";
chr21	HAVANA	transcript	30744821	30745886	.	+	.	gene_id "ENSG00000228817.1"; transcript_id "ENST00000436529.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000240.6"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000240.6-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000078880.1"; havana_transcript "OTTHUMT00000171987.1";
chr21	ENSEMBL	transcript	30761707	30761810	.	-	.	gene_id "ENSG00000239171.1"; transcript_id "ENST00000459184.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13.430"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.430-201"; level 3;
chr21	HAVANA	transcript	30868367	30872706	.	+	.	gene_id "ENSG00000234293.1"; transcript_id "ENST00000429843.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000240.7"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000240.7-001"; level 2; havana_gene "OTTHUMG00000078874.1"; havana_transcript "OTTHUMT00000171967.1";
chr21	HAVANA	transcript	30909254	31311850	.	-	.	gene_id "ENSG00000171189.11"; transcript_id "ENST00000327783.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GRIK1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GRIK1-004"; level 2; tag "not_organism-supported"; havana_gene "OTTHUMG00000078879.1"; havana_transcript "OTTHUMT00000171981.1";
chr21	HAVANA	transcript	30909254	31311943	.	-	.	gene_id "ENSG00000171189.11"; transcript_id "ENST00000389125.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GRIK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GRIK1-001"; level 2; tag "CCDS"; ccdsid "CCDS33530.1"; havana_gene "OTTHUMG00000078879.1"; havana_transcript "OTTHUMT00000171978.1";
chr21	HAVANA	transcript	30909254	31311992	.	-	.	gene_id "ENSG00000171189.11"; transcript_id "ENST00000399913.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GRIK1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GRIK1-006"; level 2; havana_gene "OTTHUMG00000078879.1"; havana_transcript "OTTHUMT00000171983.1";
chr21	HAVANA	transcript	30909254	31312340	.	-	.	gene_id "ENSG00000171189.11"; transcript_id "ENST00000399914.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GRIK1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GRIK1-003"; level 2; tag "not_organism-supported"; havana_gene "OTTHUMG00000078879.1"; havana_transcript "OTTHUMT00000171980.1";
chr21	ENSEMBL	transcript	30909551	31311818	.	-	.	gene_id "ENSG00000171189.11"; transcript_id "ENST00000535441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GRIK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GRIK1-202"; level 3; tag "CCDS"; ccdsid "CCDS33530.1"; havana_gene "OTTHUMG00000078879.1";
chr21	ENSEMBL	transcript	30909653	31311818	.	-	.	gene_id "ENSG00000171189.11"; transcript_id "ENST00000541508.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GRIK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GRIK1-203"; level 3; havana_gene "OTTHUMG00000078879.1";
chr21	HAVANA	transcript	30910027	31311850	.	-	.	gene_id "ENSG00000171189.11"; transcript_id "ENST00000389124.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GRIK1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GRIK1-005"; level 2; tag "not_organism-supported"; havana_gene "OTTHUMG00000078879.1"; havana_transcript "OTTHUMT00000171982.1";
chr21	HAVANA	transcript	30925573	31312230	.	-	.	gene_id "ENSG00000171189.11"; transcript_id "ENST00000399907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GRIK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GRIK1-002"; level 2; tag "CCDS"; ccdsid "CCDS42913.1"; havana_gene "OTTHUMG00000078879.1"; havana_transcript "OTTHUMT00000171979.1";
chr21	HAVANA	transcript	30925573	31312230	.	-	.	gene_id "ENSG00000171189.11"; transcript_id "ENST00000399909.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GRIK1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "GRIK1-008"; level 2; havana_gene "OTTHUMG00000078879.1"; havana_transcript "OTTHUMT00000171985.1";
chr21	ENSEMBL	transcript	30925876	31311818	.	-	.	gene_id "ENSG00000171189.11"; transcript_id "ENST00000309434.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GRIK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GRIK1-201"; level 3; tag "CCDS"; ccdsid "CCDS42913.1"; havana_gene "OTTHUMG00000078879.1";
chr21	HAVANA	transcript	30971114	31312351	.	-	.	gene_id "ENSG00000171189.11"; transcript_id "ENST00000472429.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GRIK1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GRIK1-007"; level 2; havana_gene "OTTHUMG00000078879.1"; havana_transcript "OTTHUMT00000171984.1";
chr21	ENSEMBL	transcript	30968360	31003067	.	+	.	gene_id "ENSG00000183653.4"; transcript_id "ENST00000333765.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NCRNA00258"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00258-201"; level 3;
chr21	HAVANA	transcript	31120494	31135999	.	+	.	gene_id "ENSG00000174680.5"; transcript_id "ENST00000455392.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "GRIK1-AS1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GRIK1-AS1-002"; level 2; havana_gene "OTTHUMG00000081875.1"; havana_transcript "OTTHUMT00000182264.1";
chr21	HAVANA	transcript	31121257	31136321	.	+	.	gene_id "ENSG00000174680.5"; transcript_id "ENST00000309331.4"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "GRIK1-AS1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GRIK1-AS1-001"; level 2; havana_gene "OTTHUMG00000081875.1"; havana_transcript "OTTHUMT00000182263.1";
chr21	HAVANA	transcript	31121266	31136321	.	+	.	gene_id "ENSG00000174680.5"; transcript_id "ENST00000423221.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "GRIK1-AS1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GRIK1-AS1-003"; level 2; havana_gene "OTTHUMG00000081875.1"; havana_transcript "OTTHUMT00000182265.1";
chr21	HAVANA	transcript	31131150	31136321	.	+	.	gene_id "ENSG00000174680.5"; transcript_id "ENST00000412579.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "GRIK1-AS1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GRIK1-AS1-004"; level 2; havana_gene "OTTHUMG00000081875.1"; havana_transcript "OTTHUMT00000182266.1";
chr21	HAVANA	transcript	31132713	31136321	.	+	.	gene_id "ENSG00000174680.5"; transcript_id "ENST00000413131.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "GRIK1-AS1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GRIK1-AS1-005"; level 2; havana_gene "OTTHUMG00000081875.1"; havana_transcript "OTTHUMT00000182267.1";
chr21	HAVANA	transcript	31538241	31538971	.	-	.	gene_id "ENSG00000156282.3"; transcript_id "ENST00000286808.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN17"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN17-001"; level 2; tag "CCDS"; ccdsid "CCDS13586.1"; havana_gene "OTTHUMG00000081873.1"; havana_transcript "OTTHUMT00000182261.1";
chr21	HAVANA	transcript	31581469	31584101	.	-	.	gene_id "ENSG00000227342.1"; transcript_id "ENST00000451410.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000884.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000884.4-001"; level 2; havana_gene "OTTHUMG00000081871.1"; havana_transcript "OTTHUMT00000182259.1";
chr21	HAVANA	transcript	31586324	31588391	.	-	.	gene_id "ENSG00000156284.3"; transcript_id "ENST00000399899.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN8-001"; level 2; tag "CCDS"; ccdsid "CCDS13587.1"; havana_gene "OTTHUMG00000081872.1"; havana_transcript "OTTHUMT00000182260.1";
chr21	ENSEMBL	transcript	31586325	31588352	.	-	.	gene_id "ENSG00000156284.3"; transcript_id "ENST00000286809.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN8-201"; level 3; tag "CCDS"; ccdsid "CCDS13587.1"; havana_gene "OTTHUMG00000081872.1";
chr21	ENSEMBL	transcript	31586499	31588391	.	-	.	gene_id "ENSG00000156284.3"; transcript_id "ENST00000536721.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN8-202"; level 3; havana_gene "OTTHUMG00000081872.1";
chr21	HAVANA	transcript	31635698	31636199	.	-	.	gene_id "ENSG00000225267.1"; transcript_id "ENST00000430538.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPL8P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPL8P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000081870.1"; havana_transcript "OTTHUMT00000182258.1";
chr21	HAVANA	transcript	31653629	31655276	.	-	.	gene_id "ENSG00000188694.4"; transcript_id "ENST00000340345.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP24-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP24-1-001"; level 2; tag "CCDS"; ccdsid "CCDS42915.1"; havana_gene "OTTHUMG00000125483.2"; havana_transcript "OTTHUMT00000246806.2";
chr21	HAVANA	transcript	31661463	31661832	.	-	.	gene_id "ENSG00000232263.1"; transcript_id "ENST00000416044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP25-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP25-1-001"; level 2; tag "CCDS"; ccdsid "CCDS46640.1"; havana_gene "OTTHUMG00000125482.1"; havana_transcript "OTTHUMT00000246805.1";
chr21	HAVANA	transcript	31691452	31692607	.	-	.	gene_id "ENSG00000197683.3"; transcript_id "ENST00000360542.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP26-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP26-1-001"; level 2; tag "CCDS"; ccdsid "CCDS13588.1"; havana_gene "OTTHUMG00000057766.1"; havana_transcript "OTTHUMT00000128218.1";
chr21	HAVANA	transcript	31709331	31710012	.	-	.	gene_id "ENSG00000206107.2"; transcript_id "ENST00000382835.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP27-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP27-1-001"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS33532.1"; havana_gene "OTTHUMG00000059577.3"; havana_transcript "OTTHUMT00000132470.3";
chr21	HAVANA	transcript	31720717	31720924	.	-	.	gene_id "ENSG00000186980.5"; transcript_id "ENST00000334160.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP23-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP23-1-001"; level 2; tag "CCDS"; ccdsid "CCDS33533.1"; havana_gene "OTTHUMG00000057792.4"; havana_transcript "OTTHUMT00000128244.4";
chr21	HAVANA	transcript	31728833	31729203	.	-	.	gene_id "ENSG00000250973.1"; transcript_id "ENST00000508999.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRTAP13-6P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRTAP13-6P-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000057780.2"; havana_transcript "OTTHUMT00000128232.2";
chr21	HAVANA	transcript	31743709	31744557	.	-	.	gene_id "ENSG00000182816.6"; transcript_id "ENST00000399889.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP13-2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP13-2-001"; level 2; tag "CCDS"; ccdsid "CCDS13589.1"; havana_gene "OTTHUMG00000057793.2"; havana_transcript "OTTHUMT00000128245.1";
chr21	HAVANA	transcript	31768392	31769136	.	+	.	gene_id "ENSG00000198390.3"; transcript_id "ENST00000355459.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP13-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP13-1-001"; level 2; tag "CCDS"; ccdsid "CCDS13590.2"; havana_gene "OTTHUMG00000057800.3"; havana_transcript "OTTHUMT00000128252.3";
chr21	HAVANA	transcript	31797583	31798286	.	-	.	gene_id "ENSG00000240432.2"; transcript_id "ENST00000390690.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP13-3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP13-3-001"; level 2; tag "CCDS"; ccdsid "CCDS13591.1"; havana_gene "OTTHUMG00000057776.2"; havana_transcript "OTTHUMT00000128228.2";
chr21	ENSEMBL	transcript	31797712	31798230	.	-	.	gene_id "ENSG00000240432.2"; transcript_id "ENST00000448917.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP13-3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP13-3-201"; level 3; tag "CCDS"; ccdsid "CCDS13591.1"; havana_gene "OTTHUMG00000057776.2";
chr21	HAVANA	transcript	31802572	31803216	.	+	.	gene_id "ENSG00000186971.2"; transcript_id "ENST00000334068.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP13-4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP13-4-001"; level 2; tag "CCDS"; ccdsid "CCDS13592.1"; havana_gene "OTTHUMG00000057770.1"; havana_transcript "OTTHUMT00000128222.1";
chr21	HAVANA	transcript	31808784	31809282	.	-	.	gene_id "ENSG00000233640.2"; transcript_id "ENST00000418755.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRTAP13-5P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRTAP13-5P-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000057795.2"; havana_transcript "OTTHUMT00000128247.2";
chr21	HAVANA	transcript	31812597	31813070	.	+	.	gene_id "ENSG00000186970.3"; transcript_id "ENST00000334067.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP15-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP15-1-001"; level 2; tag "CCDS"; ccdsid "CCDS13593.1"; havana_gene "OTTHUMG00000057784.1"; havana_transcript "OTTHUMT00000128236.1";
chr21	HAVANA	transcript	31852018	31852663	.	-	.	gene_id "ENSG00000184351.6"; transcript_id "ENST00000390689.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP19-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP19-1-001"; level 2; tag "CCDS"; ccdsid "CCDS13594.1"; havana_gene "OTTHUMG00000057768.2"; havana_transcript "OTTHUMT00000128220.2";
chr21	ENSEMBL	transcript	31852364	31852636	.	-	.	gene_id "ENSG00000184351.6"; transcript_id "ENST00000433652.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP19-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP19-1-201"; level 3; tag "CCDS"; ccdsid "CCDS13594.1"; havana_gene "OTTHUMG00000057768.2";
chr21	HAVANA	transcript	31859362	31859755	.	-	.	gene_id "ENSG00000186965.3"; transcript_id "ENST00000334055.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP19-2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP19-2-001"; level 2; tag "CCDS"; ccdsid "CCDS13595.1"; havana_gene "OTTHUMG00000057772.3"; havana_transcript "OTTHUMT00000128224.3";
chr21	HAVANA	transcript	31863782	31864275	.	-	.	gene_id "ENSG00000244025.2"; transcript_id "ENST00000334063.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP19-3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP19-3-001"; level 2; tag "CCDS"; ccdsid "CCDS13596.1"; havana_gene "OTTHUMG00000057782.2"; havana_transcript "OTTHUMT00000128234.2";
chr21	HAVANA	transcript	31869142	31869451	.	-	.	gene_id "ENSG00000186967.6"; transcript_id "ENST00000334058.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP19-4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP19-4-001"; level 2; tag "CCDS"; ccdsid "CCDS33534.1"; havana_gene "OTTHUMG00000057767.2"; havana_transcript "OTTHUMT00000128219.2";
chr21	HAVANA	transcript	31873975	31874435	.	-	.	gene_id "ENSG00000186977.2"; transcript_id "ENST00000334151.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP19-5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP19-5-001"; level 2; tag "CCDS"; ccdsid "CCDS13597.1"; havana_gene "OTTHUMG00000057774.2"; havana_transcript "OTTHUMT00000128226.2";
chr21	HAVANA	transcript	31882625	31882815	.	-	.	gene_id "ENSG00000237841.1"; transcript_id "ENST00000421795.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRTAP19-9P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRTAP19-9P-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000057789.2"; havana_transcript "OTTHUMT00000128241.2";
chr21	HAVANA	transcript	31886931	31887117	.	-	.	gene_id "ENSG00000235312.1"; transcript_id "ENST00000445258.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRTAP19-10P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRTAP19-10P-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000057775.2"; havana_transcript "OTTHUMT00000128227.2";
chr21	HAVANA	transcript	31898864	31899019	.	-	.	gene_id "ENSG00000218125.1"; transcript_id "ENST00000406413.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000567.27"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "AP000567.27-001"; level 2; havana_gene "OTTHUMG00000057783.2"; havana_transcript "OTTHUMT00000128235.2";
chr21	HAVANA	transcript	31909597	31909700	.	-	.	gene_id "ENSG00000236612.1"; transcript_id "ENST00000439851.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRTAP19-11P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRTAP19-11P-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000057799.1"; havana_transcript "OTTHUMT00000128251.1";
chr21	HAVANA	transcript	31913854	31914183	.	-	.	gene_id "ENSG00000186925.5"; transcript_id "ENST00000334046.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP19-6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP19-6-001"; level 2; tag "CCDS"; ccdsid "CCDS13598.1"; havana_gene "OTTHUMG00000057779.4"; havana_transcript "OTTHUMT00000128231.4";
chr21	ENSEMBL	transcript	31913924	31914152	.	-	.	gene_id "ENSG00000186925.5"; transcript_id "ENST00000437381.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP19-6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP19-6-201"; level 3; havana_gene "OTTHUMG00000057779.4";
chr21	HAVANA	transcript	31933194	31933633	.	-	.	gene_id "ENSG00000244362.1"; transcript_id "ENST00000334849.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP19-7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP19-7-001"; level 2; tag "CCDS"; ccdsid "CCDS13599.1"; havana_gene "OTTHUMG00000057785.2"; havana_transcript "OTTHUMT00000128237.2";
chr21	HAVANA	transcript	31962424	31962716	.	-	.	gene_id "ENSG00000206106.2"; transcript_id "ENST00000382830.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP22-2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP22-2-001"; level 2; tag "CCDS"; ccdsid "CCDS46641.1"; havana_gene "OTTHUMG00000065630.2"; havana_transcript "OTTHUMT00000140633.2";
chr21	HAVANA	transcript	31964759	31965394	.	+	.	gene_id "ENSG00000212938.3"; transcript_id "ENST00000391624.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP6-3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP6-3-001"; level 2; havana_gene "OTTHUMG00000057791.2"; havana_transcript "OTTHUMT00000128243.2";
chr21	ENSEMBL	transcript	31964786	31965076	.	+	.	gene_id "ENSG00000256818.1"; transcript_id "ENST00000537053.1"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AP001069.1"; transcript_type "pseudogene"; transcript_status "NOVEL"; transcript_name "AP001069.1-201"; level 3;
chr21	HAVANA	transcript	31970909	31971219	.	-	.	gene_id "ENSG00000186930.3"; transcript_id "ENST00000334897.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP6-2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP6-2-001"; level 2; tag "CCDS"; ccdsid "CCDS13600.1"; havana_gene "OTTHUMG00000057794.3"; havana_transcript "OTTHUMT00000128246.3";
chr21	HAVANA	transcript	31973414	31973612	.	+	.	gene_id "ENSG00000186924.2"; transcript_id "ENST00000334680.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP22-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP22-1-001"; level 2; tag "CCDS"; ccdsid "CCDS13601.1"; havana_gene "OTTHUMG00000057778.2"; havana_transcript "OTTHUMT00000128230.2";
chr21	HAVANA	transcript	31985750	31986249	.	-	.	gene_id "ENSG00000184724.4"; transcript_id "ENST00000329122.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP6-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP6-1-001"; level 2; tag "CCDS"; ccdsid "CCDS13602.1"; havana_gene "OTTHUMG00000057788.2"; havana_transcript "OTTHUMT00000128240.2";
chr21	ENSEMBL	transcript	31986074	31989896	.	-	.	gene_id "ENSG00000184724.4"; transcript_id "ENST00000399871.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP6-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP6-1-201"; level 3; havana_gene "OTTHUMG00000057788.2";
chr21	HAVANA	transcript	31988750	31989003	.	+	.	gene_id "ENSG00000244624.2"; transcript_id "ENST00000334664.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP20-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP20-1-001"; level 2; tag "CCDS"; ccdsid "CCDS13603.1"; havana_gene "OTTHUMG00000057801.3"; havana_transcript "OTTHUMT00000128253.3";
chr21	HAVANA	transcript	31992946	31993169	.	+	.	gene_id "ENSG00000206105.2"; transcript_id "ENST00000382828.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP20-4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP20-4-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000125519.1"; havana_transcript "OTTHUMT00000246846.1";
chr21	HAVANA	transcript	32007555	32007938	.	+	.	gene_id "ENSG00000184032.2"; transcript_id "ENST00000330798.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP20-2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP20-2-001"; level 2; tag "CCDS"; ccdsid "CCDS13604.1"; havana_gene "OTTHUMG00000057786.3"; havana_transcript "OTTHUMT00000128238.3";
chr21	HAVANA	transcript	32015183	32015455	.	+	.	gene_id "ENSG00000206104.2"; transcript_id "ENST00000382826.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP20-3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "KRTAP20-3-001"; level 2; tag "CCDS"; ccdsid "CCDS46642.1"; havana_gene "OTTHUMG00000057798.2"; havana_transcript "OTTHUMT00000128250.2";
chr21	HAVANA	transcript	32090843	32091095	.	-	.	gene_id "ENSG00000231068.1"; transcript_id "ENST00000444335.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP21-3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP21-3-001"; level 2; havana_gene "OTTHUMG00000125533.1"; havana_transcript "OTTHUMT00000246864.1";
chr21	HAVANA	transcript	32114098	32114913	.	-	.	gene_id "ENSG00000236400.1"; transcript_id "ENST00000454921.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000243.18"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000243.18-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000057790.1"; havana_transcript "OTTHUMT00000128242.1";
chr21	HAVANA	transcript	32119112	32119551	.	-	.	gene_id "ENSG00000187026.2"; transcript_id "ENST00000333892.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP21-2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP21-2-001"; level 2; tag "CCDS"; ccdsid "CCDS13605.1"; havana_gene "OTTHUMG00000057769.2"; havana_transcript "OTTHUMT00000128221.2";
chr21	HAVANA	transcript	32127439	32127746	.	-	.	gene_id "ENSG00000187005.3"; transcript_id "ENST00000335093.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP21-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP21-1-001"; level 2; tag "CCDS"; ccdsid "CCDS13606.1"; havana_gene "OTTHUMG00000057777.2"; havana_transcript "OTTHUMT00000128229.2";
chr21	HAVANA	transcript	32135000	32135200	.	-	.	gene_id "ENSG00000238257.1"; transcript_id "ENST00000424582.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000244.11"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000244.11-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000084862.1"; havana_transcript "OTTHUMT00000192541.1";
chr21	HAVANA	transcript	32174560	32174745	.	-	.	gene_id "ENSG00000233036.1"; transcript_id "ENST00000440620.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRTAP8-2P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRTAP8-2P-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000057797.2"; havana_transcript "OTTHUMT00000128249.2";
chr21	HAVANA	transcript	32179250	32179437	.	-	.	gene_id "ENSG00000227840.1"; transcript_id "ENST00000423658.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRTAP8-3P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRTAP8-3P-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000057781.2"; havana_transcript "OTTHUMT00000128233.2";
chr21	HAVANA	transcript	32185016	32185570	.	-	.	gene_id "ENSG00000183640.4"; transcript_id "ENST00000329621.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP8-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP8-1-001"; level 2; tag "CCDS"; ccdsid "CCDS13607.1"; havana_gene "OTTHUMG00000057771.1"; havana_transcript "OTTHUMT00000128223.1";
chr21	HAVANA	transcript	32201357	32202078	.	-	.	gene_id "ENSG00000184586.4"; transcript_id "ENST00000452750.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "KRTAP7-1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KRTAP7-1-001"; level 2; havana_gene "OTTHUMG00000057796.3"; havana_transcript "OTTHUMT00000128248.3";
chr21	ENSEMBL	transcript	32201362	32202051	.	-	.	gene_id "ENSG00000256386.1"; transcript_id "ENST00000539876.1"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AP000244.1"; transcript_type "pseudogene"; transcript_status "NOVEL"; transcript_name "AP000244.1-201"; level 3;
chr21	HAVANA	transcript	32252966	32253874	.	-	.	gene_id "ENSG00000182591.4"; transcript_id "ENST00000332378.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP11-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP11-1-001"; level 2; tag "CCDS"; ccdsid "CCDS13608.1"; havana_gene "OTTHUMG00000057773.1"; havana_transcript "OTTHUMT00000128225.1";
chr21	HAVANA	transcript	32361860	32496988	.	-	.	gene_id "ENSG00000156299.6"; transcript_id "ENST00000461148.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TIAM1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TIAM1-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "non-submitted_evidence"; havana_gene "OTTHUMG00000084869.3"; havana_transcript "OTTHUMT00000329169.1";
chr21	HAVANA	transcript	32490734	32931290	.	-	.	gene_id "ENSG00000156299.6"; transcript_id "ENST00000286827.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TIAM1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TIAM1-001"; level 2; tag "CCDS"; ccdsid "CCDS13609.1"; havana_gene "OTTHUMG00000084869.3"; havana_transcript "OTTHUMT00000192552.1";
chr21	HAVANA	transcript	32490736	32502539	.	-	.	gene_id "ENSG00000156299.6"; transcript_id "ENST00000423206.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TIAM1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TIAM1-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000084869.3"; havana_transcript "OTTHUMT00000192556.1";
chr21	ENSEMBL	transcript	32490736	32931290	.	-	.	gene_id "ENSG00000156299.6"; transcript_id "ENST00000399841.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TIAM1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TIAM1-201"; level 3; havana_gene "OTTHUMG00000084869.3";
chr21	ENSEMBL	transcript	32492675	32649083	.	-	.	gene_id "ENSG00000156299.6"; transcript_id "ENST00000541036.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TIAM1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TIAM1-202"; level 3; havana_gene "OTTHUMG00000084869.3";
chr21	HAVANA	transcript	32496257	32502624	.	-	.	gene_id "ENSG00000156299.6"; transcript_id "ENST00000491927.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TIAM1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TIAM1-004"; level 2; havana_gene "OTTHUMG00000084869.3"; havana_transcript "OTTHUMT00000192555.1";
chr21	HAVANA	transcript	32584947	32932290	.	-	.	gene_id "ENSG00000156299.6"; transcript_id "ENST00000469412.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TIAM1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TIAM1-002"; level 2; havana_gene "OTTHUMG00000084869.3"; havana_transcript "OTTHUMT00000192553.1";
chr21	HAVANA	transcript	32638612	32716594	.	-	.	gene_id "ENSG00000156299.6"; transcript_id "ENST00000455508.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TIAM1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TIAM1-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000084869.3"; havana_transcript "OTTHUMT00000192554.1";
chr21	HAVANA	transcript	32410478	32410795	.	-	.	gene_id "ENSG00000206102.2"; transcript_id "ENST00000382822.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP19-8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP19-8-001"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS42917.1"; havana_gene "OTTHUMG00000057787.3"; havana_transcript "OTTHUMT00000128239.3";
chr21	HAVANA	transcript	32432919	32435487	.	-	.	gene_id "ENSG00000228941.1"; transcript_id "ENST00000429033.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "UBE3AP2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "UBE3AP2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000084863.1"; havana_transcript "OTTHUMT00000192542.1";
chr21	HAVANA	transcript	32824779	32825536	.	+	.	gene_id "ENSG00000237325.3"; transcript_id "ENST00000490865.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000563.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000563.2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000084871.1"; havana_transcript "OTTHUMT00000192558.1";
chr21	HAVANA	transcript	32931537	32932800	.	+	.	gene_id "ENSG00000237594.1"; transcript_id "ENST00000433071.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000251.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000251.2-001"; level 2; havana_gene "OTTHUMG00000084870.1"; havana_transcript "OTTHUMT00000192557.1";
chr21	HAVANA	transcript	32999440	33000913	.	-	.	gene_id "ENSG00000230870.2"; transcript_id "ENST00000393804.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "FBXW11P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "FBXW11P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000084868.1"; havana_transcript "OTTHUMT00000192551.1";
chr21	HAVANA	transcript	33025906	33031813	.	-	.	gene_id "ENSG00000234509.1"; transcript_id "ENST00000449339.1"; gene_type "lincRNA"; gene_status "PUTATIVE"; gene_name "AP000253.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000253.1-001"; level 2; havana_gene "OTTHUMG00000084879.1"; havana_transcript "OTTHUMT00000192589.1";
chr21	HAVANA	transcript	33031935	33041244	.	+	.	gene_id "ENSG00000142168.9"; transcript_id "ENST00000270142.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SOD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SOD1-001"; level 2; tag "CCDS"; ccdsid "CCDS33536.1"; havana_gene "OTTHUMG00000084878.2"; havana_transcript "OTTHUMT00000192585.2";
chr21	HAVANA	transcript	33031979	33041244	.	+	.	gene_id "ENSG00000142168.9"; transcript_id "ENST00000389995.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SOD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SOD1-002"; level 2; havana_gene "OTTHUMG00000084878.2"; havana_transcript "OTTHUMT00000192586.1";
chr21	HAVANA	transcript	33032006	33039654	.	+	.	gene_id "ENSG00000142168.9"; transcript_id "ENST00000476106.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SOD1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SOD1-004"; level 2; havana_gene "OTTHUMG00000084878.2"; havana_transcript "OTTHUMT00000192588.1";
chr21	ENSEMBL	transcript	33032016	33040986	.	+	.	gene_id "ENSG00000142168.9"; transcript_id "ENST00000535823.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SOD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SOD1-201"; level 3; havana_gene "OTTHUMG00000084878.2";
chr21	HAVANA	transcript	33032022	33041244	.	+	.	gene_id "ENSG00000142168.9"; transcript_id "ENST00000470944.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SOD1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SOD1-003"; level 2; havana_gene "OTTHUMG00000084878.2"; havana_transcript "OTTHUMT00000192587.2";
chr21	ENSEMBL	transcript	33036619	33036795	.	+	.	gene_id "ENSG00000238390.1"; transcript_id "ENST00000458922.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA81.1"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA81.1-201"; level 3;
chr21	ENSEMBL	transcript	33043313	33104431	.	-	.	gene_id "ENSG00000156304.9"; transcript_id "ENST00000434667.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCAF4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCAF4-201"; level 3; havana_gene "OTTHUMG00000084903.4";
chr21	HAVANA	transcript	33043346	33104388	.	-	.	gene_id "ENSG00000156304.9"; transcript_id "ENST00000286835.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCAF4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCAF4-001"; level 2; tag "CCDS"; ccdsid "CCDS33537.1"; havana_gene "OTTHUMG00000084903.4"; havana_transcript "OTTHUMT00000192659.1";
chr21	HAVANA	transcript	33043346	33104388	.	-	.	gene_id "ENSG00000156304.9"; transcript_id "ENST00000399804.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCAF4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SCAF4-002"; level 2; tag "CCDS"; ccdsid "CCDS46644.1"; havana_gene "OTTHUMG00000084903.4"; havana_transcript "OTTHUMT00000192660.1";
chr21	HAVANA	transcript	33056308	33074136	.	-	.	gene_id "ENSG00000156304.9"; transcript_id "ENST00000467731.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCAF4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SCAF4-003"; level 2; havana_gene "OTTHUMG00000084903.4"; havana_transcript "OTTHUMT00000192661.1";
chr21	HAVANA	transcript	33063134	33065643	.	-	.	gene_id "ENSG00000156304.9"; transcript_id "ENST00000472318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCAF4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SCAF4-005"; level 2; havana_gene "OTTHUMG00000084903.4"; havana_transcript "OTTHUMT00000192663.1";
chr21	HAVANA	transcript	33073072	33104274	.	-	.	gene_id "ENSG00000156304.9"; transcript_id "ENST00000485790.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SCAF4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SCAF4-004"; level 2; havana_gene "OTTHUMG00000084903.4"; havana_transcript "OTTHUMT00000192662.1";
chr21	HAVANA	transcript	33078868	33079177	.	+	.	gene_id "ENSG00000229046.1"; transcript_id "ENST00000445197.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "HMGN1P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "HMGN1P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000084901.1"; havana_transcript "OTTHUMT00000192657.1";
chr21	HAVANA	transcript	33212653	33213170	.	+	.	gene_id "ENSG00000234107.1"; transcript_id "ENST00000458495.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "TPT1P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "TPT1P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000084902.1"; havana_transcript "OTTHUMT00000192658.1";
chr21	HAVANA	transcript	33245628	33376377	.	+	.	gene_id "ENSG00000142149.4"; transcript_id "ENST00000270112.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HUNK"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HUNK-001"; level 2; tag "CCDS"; ccdsid "CCDS13610.1"; havana_gene "OTTHUMG00000085019.2"; havana_transcript "OTTHUMT00000192782.1";
chr21	HAVANA	transcript	33296864	33340646	.	+	.	gene_id "ENSG00000142149.4"; transcript_id "ENST00000430354.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HUNK"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "HUNK-002"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000085019.2"; havana_transcript "OTTHUMT00000192783.1";
chr21	HAVANA	transcript	33346490	33368240	.	+	.	gene_id "ENSG00000142149.4"; transcript_id "ENST00000465574.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HUNK"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "HUNK-003"; level 2; havana_gene "OTTHUMG00000085019.2"; havana_transcript "OTTHUMT00000193077.1";
chr21	HAVANA	transcript	33347015	33416946	.	+	.	gene_id "ENSG00000142149.4"; transcript_id "ENST00000439107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HUNK"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "HUNK-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000085019.2"; havana_transcript "OTTHUMT00000193078.1";
chr21	HAVANA	transcript	33393279	33394095	.	-	.	gene_id "ENSG00000237138.1"; transcript_id "ENST00000437109.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000260.4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000260.4-001"; level 2; havana_gene "OTTHUMG00000085305.1"; havana_transcript "OTTHUMT00000193086.1";
chr21	HAVANA	transcript	33452629	33570125	.	-	.	gene_id "ENSG00000230323.1"; transcript_id "ENST00000414877.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00159"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00159-001"; level 2; havana_gene "OTTHUMG00000085307.1"; havana_transcript "OTTHUMT00000193088.1";
chr21	HAVANA	transcript	33452629	33458608	.	-	.	gene_id "ENSG00000230323.1"; transcript_id "ENST00000411605.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00159"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00159-002"; level 2; havana_gene "OTTHUMG00000085307.1"; havana_transcript "OTTHUMT00000193089.1";
chr21	ENSEMBL	transcript	33464591	33464731	.	-	.	gene_id "ENSG00000211541.1"; transcript_id "ENST00000390207.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP000263.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP000263.1-201"; level 3;
chr21	HAVANA	transcript	33640530	33651380	.	-	.	gene_id "ENSG00000159055.3"; transcript_id "ENST00000290130.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIS18A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MIS18A-001"; level 2; tag "CCDS"; ccdsid "CCDS13611.1"; havana_gene "OTTHUMG00000085308.1"; havana_transcript "OTTHUMT00000193090.1";
chr21	HAVANA	transcript	33641919	33642889	.	-	.	gene_id "ENSG00000159055.3"; transcript_id "ENST00000486363.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MIS18A"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MIS18A-002"; level 2; havana_gene "OTTHUMG00000085308.1"; havana_transcript "OTTHUMT00000193091.1";
chr21	HAVANA	transcript	33650174	33653299	.	+	.	gene_id "ENSG00000227256.1"; transcript_id "ENST00000453549.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000266.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000266.5-001"; level 2; havana_gene "OTTHUMG00000085306.1"; havana_transcript "OTTHUMT00000193087.1";
chr21	HAVANA	transcript	33664124	33684601	.	+	.	gene_id "ENSG00000170262.8"; transcript_id "ENST00000399784.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRAP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRAP-001"; level 2; tag "CCDS"; ccdsid "CCDS13613.1"; havana_gene "OTTHUMG00000085309.1"; havana_transcript "OTTHUMT00000193092.1";
chr21	HAVANA	transcript	33664124	33684601	.	+	.	gene_id "ENSG00000170262.8"; transcript_id "ENST00000497833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRAP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MRAP-002"; level 2; havana_gene "OTTHUMG00000085309.1"; havana_transcript "OTTHUMT00000193093.1";
chr21	ENSEMBL	transcript	33664124	33687092	.	+	.	gene_id "ENSG00000170262.8"; transcript_id "ENST00000399786.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRAP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRAP-201"; level 3; tag "CCDS"; ccdsid "CCDS13612.1"; havana_gene "OTTHUMG00000085309.1";
chr21	HAVANA	transcript	33671161	33684601	.	+	.	gene_id "ENSG00000170262.8"; transcript_id "ENST00000303645.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRAP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRAP-003"; level 2; tag "CCDS"; ccdsid "CCDS13613.1"; havana_gene "OTTHUMG00000085309.1"; havana_transcript "OTTHUMT00000193094.1";
chr21	HAVANA	transcript	33671283	33687095	.	+	.	gene_id "ENSG00000170262.8"; transcript_id "ENST00000339944.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRAP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRAP-004"; level 2; tag "CCDS"; ccdsid "CCDS13612.1"; havana_gene "OTTHUMG00000085309.1"; havana_transcript "OTTHUMT00000193095.1";
chr21	HAVANA	transcript	33678775	33681048	.	-	.	gene_id "ENSG00000232623.1"; transcript_id "ENST00000450936.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000266.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000266.7-001"; level 2; havana_gene "OTTHUMG00000085304.1"; havana_transcript "OTTHUMT00000193085.1";
chr21	HAVANA	transcript	33683329	33765335	.	-	.	gene_id "ENSG00000142207.5"; transcript_id "ENST00000382751.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "URB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "URB1-001"; level 2; tag "CCDS"; ccdsid "CCDS46645.1"; havana_gene "OTTHUMG00000064919.3"; havana_transcript "OTTHUMT00000139400.2";
chr21	HAVANA	transcript	33705422	33709404	.	-	.	gene_id "ENSG00000142207.5"; transcript_id "ENST00000480196.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "URB1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "URB1-002"; level 2; havana_gene "OTTHUMG00000064919.3"; havana_transcript "OTTHUMT00000315808.1";
chr21	HAVANA	transcript	33706518	33707939	.	-	.	gene_id "ENSG00000142207.5"; transcript_id "ENST00000492603.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "URB1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "URB1-003"; level 2; havana_gene "OTTHUMG00000064919.3"; havana_transcript "OTTHUMT00000315809.1";
chr21	ENSEMBL	transcript	33714795	33715062	.	-	.	gene_id "ENSG00000242871.1"; transcript_id "ENST00000493105.1"; gene_type "scRNA_pseudogene"; gene_status "NOVEL"; gene_name "AP000268.1"; transcript_type "scRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AP000268.1-201"; level 3;
chr21	ENSEMBL	transcript	33749496	33749631	.	-	.	gene_id "ENSG00000200792.1"; transcript_id "ENST00000363922.1"; gene_type "snoRNA"; gene_status "KNOWN"; gene_name "SNORA80"; transcript_type "snoRNA"; transcript_status "KNOWN"; transcript_name "SNORA80-201"; level 3;
chr21	HAVANA	transcript	33765439	33766269	.	+	.	gene_id "ENSG00000256073.1"; transcript_id "ENST00000534991.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf119"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf119-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000064921.2"; havana_transcript "OTTHUMT00000139402.2";
chr21	HAVANA	transcript	33784314	33840363	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000469079.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C21orf63-004"; level 2; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000139406.1";
chr21	HAVANA	transcript	33784350	33873765	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000459833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf63-009"; level 2; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000139411.1";
chr21	HAVANA	transcript	33784689	33887699	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000300255.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf63-001"; level 2; tag "CCDS"; ccdsid "CCDS13614.1"; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000139403.1";
chr21	HAVANA	transcript	33784745	33887699	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000435323.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C21orf63-005"; level 2; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000139407.2";
chr21	HAVANA	transcript	33784745	33887699	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000437338.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C21orf63-007"; level 2; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000139409.2";
chr21	HAVANA	transcript	33784861	33887699	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000457807.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C21orf63-006"; level 2; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000139408.2";
chr21	HAVANA	transcript	33784993	33887707	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000401402.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf63-013"; level 2; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000318733.1";
chr21	HAVANA	transcript	33785010	33887699	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000382699.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf63-002"; level 2; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000139404.1";
chr21	HAVANA	transcript	33785072	33805592	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000481638.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "C21orf63-010"; level 2; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000139412.1";
chr21	HAVANA	transcript	33800642	33867447	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000412833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf63-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000139410.2";
chr21	HAVANA	transcript	33824493	33887699	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000464037.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C21orf63-003"; level 2; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000139405.1";
chr21	HAVANA	transcript	33865963	33887190	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000496615.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf63-011"; level 2; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000139413.1";
chr21	HAVANA	transcript	33867427	33887699	.	+	.	gene_id "ENSG00000166979.8"; transcript_id "ENST00000485488.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf63"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf63-012"; level 2; havana_gene "OTTHUMG00000064922.4"; havana_transcript "OTTHUMT00000139414.1";
chr21	ENSEMBL	transcript	33826002	33830768	.	+	.	gene_id "ENSG00000215201.2"; transcript_id "ENST00000399769.2"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AP000269.1"; transcript_type "pseudogene"; transcript_status "NOVEL"; transcript_name "AP000269.1-201"; level 3;
chr21	HAVANA	transcript	33869122	33869621	.	+	.	gene_id "ENSG00000229007.1"; transcript_id "ENST00000448649.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000271.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000271.1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000064920.1"; havana_transcript "OTTHUMT00000139401.1";
chr21	ENSEMBL	transcript	33910329	33910395	.	+	.	gene_id "ENSG00000240406.1"; transcript_id "ENST00000474893.1"; gene_type "snoRNA_pseudogene"; gene_status "NOVEL"; gene_name "AP000272.1"; transcript_type "snoRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AP000272.1-201"; level 3;
chr21	ENSEMBL	transcript	33910609	33910744	.	+	.	gene_id "ENSG00000252045.1"; transcript_id "ENST00000516236.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA33.3"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA33.3-201"; level 3;
chr21	ENSEMBL	transcript	33935385	33935520	.	+	.	gene_id "ENSG00000252950.1"; transcript_id "ENST00000517141.1"; gene_type "rRNA"; gene_status "NOVEL"; gene_name "5S_rRNA.491"; transcript_type "rRNA"; transcript_status "NOVEL"; transcript_name "5S_rRNA.491-201"; level 3;
chr21	HAVANA	transcript	33944548	33948191	.	-	.	gene_id "ENSG00000186842.4"; transcript_id "ENST00000334165.4"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf77"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf77-001"; level 2; havana_gene "OTTHUMG00000064902.3"; havana_transcript "OTTHUMT00000139353.3";
chr21	HAVANA	transcript	33948862	33957843	.	-	.	gene_id "ENSG00000242220.1"; transcript_id "ENST00000300258.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TCP10L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TCP10L-001"; level 2; tag "CCDS"; ccdsid "CCDS13616.1"; havana_gene "OTTHUMG00000064901.5"; havana_transcript "OTTHUMT00000139350.1";
chr21	HAVANA	transcript	33948969	33954744	.	-	.	gene_id "ENSG00000242220.1"; transcript_id "ENST00000491828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TCP10L"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TCP10L-002"; level 2; havana_gene "OTTHUMG00000064901.5"; havana_transcript "OTTHUMT00000139351.2";
chr21	HAVANA	transcript	33948969	33957843	.	-	.	gene_id "ENSG00000242220.1"; transcript_id "ENST00000472557.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TCP10L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TCP10L-003"; level 2; havana_gene "OTTHUMG00000064901.5"; havana_transcript "OTTHUMT00000139352.3";
chr21	HAVANA	transcript	33951132	33984456	.	-	.	gene_id "ENSG00000159079.12"; transcript_id "ENST00000431216.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf59"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf59-009"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000064928.7"; havana_transcript "OTTHUMT00000267924.1";
chr21	HAVANA	transcript	33954534	33980008	.	-	.	gene_id "ENSG00000159079.12"; transcript_id "ENST00000436676.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf59"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf59-011"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000064928.7"; havana_transcript "OTTHUMT00000267925.1";
chr21	HAVANA	transcript	33964389	33975547	.	-	.	gene_id "ENSG00000159079.12"; transcript_id "ENST00000431599.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf59"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf59-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000064928.7"; havana_transcript "OTTHUMT00000193124.2";
chr21	HAVANA	transcript	33973977	33984662	.	-	.	gene_id "ENSG00000159079.12"; transcript_id "ENST00000440966.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf59"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf59-006"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000064928.7"; havana_transcript "OTTHUMT00000193125.3";
chr21	HAVANA	transcript	33973977	33984896	.	-	.	gene_id "ENSG00000159079.12"; transcript_id "ENST00000382549.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf59"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf59-002"; level 2; havana_gene "OTTHUMG00000064928.7"; havana_transcript "OTTHUMT00000139432.2";
chr21	HAVANA	transcript	33973977	33985176	.	-	.	gene_id "ENSG00000159079.12"; transcript_id "ENST00000290155.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf59"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf59-001"; level 2; tag "CCDS"; ccdsid "CCDS13617.1"; havana_gene "OTTHUMG00000064928.7"; havana_transcript "OTTHUMT00000139431.1";
chr21	HAVANA	transcript	33974013	33976510	.	-	.	gene_id "ENSG00000159079.12"; transcript_id "ENST00000425336.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf59"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf59-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000064928.7"; havana_transcript "OTTHUMT00000139434.3";
chr21	HAVANA	transcript	33974095	33984913	.	-	.	gene_id "ENSG00000159079.12"; transcript_id "ENST00000300260.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf59"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C21orf59-003"; level 2; havana_gene "OTTHUMG00000064928.7"; havana_transcript "OTTHUMT00000139433.2";
chr21	HAVANA	transcript	33974120	33976823	.	-	.	gene_id "ENSG00000159079.12"; transcript_id "ENST00000483315.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf59"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C21orf59-008"; level 2; havana_gene "OTTHUMG00000064928.7"; havana_transcript "OTTHUMT00000193127.1";
chr21	ENSEMBL	transcript	33974120	33984896	.	-	.	gene_id "ENSG00000159079.12"; transcript_id "ENST00000543202.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf59"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf59-202"; level 3; havana_gene "OTTHUMG00000064928.7";
chr21	ENSEMBL	transcript	33974756	33984896	.	-	.	gene_id "ENSG00000159079.12"; transcript_id "ENST00000540881.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf59"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf59-201"; level 3; havana_gene "OTTHUMG00000064928.7";
chr21	HAVANA	transcript	33975535	33984865	.	-	.	gene_id "ENSG00000159079.12"; transcript_id "ENST00000458138.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf59"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf59-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000064928.7"; havana_transcript "OTTHUMT00000193126.1";
chr21	HAVANA	transcript	33993359	33994406	.	+	.	gene_id "ENSG00000228433.1"; transcript_id "ENST00000435600.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "OR7E23P"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "OR7E23P-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000064927.1"; havana_transcript "OTTHUMT00000139430.1";
chr21	HAVANA	transcript	33996726	33997406	.	-	.	gene_id "ENSG00000238220.1"; transcript_id "ENST00000411943.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000275.64"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000275.64-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000128947.1"; havana_transcript "OTTHUMT00000250926.1";
chr21	HAVANA	transcript	33997269	34003570	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000479254.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SYNJ1-010"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000064926.12"; havana_transcript "OTTHUMT00000329805.1";
chr21	HAVANA	transcript	33997269	34003570	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000490462.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SYNJ1-011"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000064926.12"; havana_transcript "OTTHUMT00000329806.1";
chr21	HAVANA	transcript	33997269	34003570	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000478228.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SYNJ1-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000064926.12"; havana_transcript "OTTHUMT00000329807.1";
chr21	ENSEMBL	transcript	34001069	34100250	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000382491.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SYNJ1-203"; level 3; havana_gene "OTTHUMG00000064926.12";
chr21	ENSEMBL	transcript	34001069	34100250	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000357345.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SYNJ1-202"; level 3; tag "CCDS"; ccdsid "CCDS33540.1"; havana_gene "OTTHUMG00000064926.12";
chr21	HAVANA	transcript	34001073	34018020	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000438952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SYNJ1-003"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000064926.12"; havana_transcript "OTTHUMT00000338108.1";
chr21	HAVANA	transcript	34001074	34100351	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000382499.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SYNJ1-001"; level 2; havana_gene "OTTHUMG00000064926.12"; havana_transcript "OTTHUMT00000139425.4";
chr21	HAVANA	transcript	34003300	34100359	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000433931.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SYNJ1-004"; level 2; havana_gene "OTTHUMG00000064926.12"; havana_transcript "OTTHUMT00000139428.4";
chr21	ENSEMBL	transcript	34003305	34099206	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000322229.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SYNJ1-201"; level 3; tag "CCDS"; ccdsid "CCDS33539.1"; havana_gene "OTTHUMG00000064926.12";
chr21	HAVANA	transcript	34004088	34014255	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000418301.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SYNJ1-009"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000064926.12"; havana_transcript "OTTHUMT00000319309.1";
chr21	HAVANA	transcript	34011324	34018029	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000416083.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SYNJ1-008"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000064926.12"; havana_transcript "OTTHUMT00000193336.1";
chr21	HAVANA	transcript	34022494	34026411	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000467445.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SYNJ1-005"; level 2; havana_gene "OTTHUMG00000064926.12"; havana_transcript "OTTHUMT00000139429.2";
chr21	HAVANA	transcript	34029001	34030871	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000464778.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SYNJ1-007"; level 2; havana_gene "OTTHUMG00000064926.12"; havana_transcript "OTTHUMT00000193335.1";
chr21	HAVANA	transcript	34038296	34100250	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000429236.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SYNJ1-002"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000064926.12"; havana_transcript "OTTHUMT00000139426.3";
chr21	HAVANA	transcript	34067536	34099253	.	-	.	gene_id "ENSG00000159082.12"; transcript_id "ENST00000456084.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SYNJ1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SYNJ1-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000064926.12"; havana_transcript "OTTHUMT00000193334.2";
chr21	HAVANA	transcript	34100426	34105227	.	+	.	gene_id "ENSG00000238197.1"; transcript_id "ENST00000458479.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000279.69"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000279.69-001"; level 2; havana_gene "OTTHUMG00000064979.3"; havana_transcript "OTTHUMT00000139562.2";
chr21	HAVANA	transcript	34100450	34115433	.	+	.	gene_id "ENSG00000238197.1"; transcript_id "ENST00000440052.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000279.69"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000279.69-002"; level 2; havana_gene "OTTHUMG00000064979.3"; havana_transcript "OTTHUMT00000139629.1";
chr21	HAVANA	transcript	34102663	34109784	.	+	.	gene_id "ENSG00000238197.1"; transcript_id "ENST00000455170.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000279.69"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000279.69-003"; level 2; havana_gene "OTTHUMG00000064979.3"; havana_transcript "OTTHUMT00000193337.1";
chr21	HAVANA	transcript	34106210	34144169	.	-	.	gene_id "ENSG00000159086.10"; transcript_id "ENST00000331923.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GCFC1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GCFC1-001"; level 2; tag "CCDS"; ccdsid "CCDS13619.1"; havana_gene "OTTHUMG00000064980.8"; havana_transcript "OTTHUMT00000139563.1";
chr21	HAVANA	transcript	34106211	34129105	.	-	.	gene_id "ENSG00000159086.10"; transcript_id "ENST00000466846.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GCFC1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GCFC1-002"; level 2; havana_gene "OTTHUMG00000064980.8"; havana_transcript "OTTHUMT00000139564.2";
chr21	HAVANA	transcript	34107131	34143998	.	-	.	gene_id "ENSG00000159086.10"; transcript_id "ENST00000443785.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GCFC1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GCFC1-006"; level 2; havana_gene "OTTHUMG00000064980.8"; havana_transcript "OTTHUMT00000139568.3";
chr21	HAVANA	transcript	34107137	34124435	.	-	.	gene_id "ENSG00000159086.10"; transcript_id "ENST00000497873.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GCFC1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GCFC1-003"; level 2; havana_gene "OTTHUMG00000064980.8"; havana_transcript "OTTHUMT00000139565.2";
chr21	HAVANA	transcript	34113704	34143979	.	-	.	gene_id "ENSG00000159086.10"; transcript_id "ENST00000290178.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GCFC1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GCFC1-005"; level 2; tag "CCDS"; ccdsid "CCDS33541.1"; havana_gene "OTTHUMG00000064980.8"; havana_transcript "OTTHUMT00000139567.4";
chr21	HAVANA	transcript	34113730	34115579	.	-	.	gene_id "ENSG00000159086.10"; transcript_id "ENST00000445049.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GCFC1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GCFC1-009"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000064980.8"; havana_transcript "OTTHUMT00000139571.2";
chr21	HAVANA	transcript	34120870	34127622	.	-	.	gene_id "ENSG00000159086.10"; transcript_id "ENST00000421049.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GCFC1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GCFC1-008"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000064980.8"; havana_transcript "OTTHUMT00000139570.2";
chr21	HAVANA	transcript	34128653	34143979	.	-	.	gene_id "ENSG00000159086.10"; transcript_id "ENST00000472588.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GCFC1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GCFC1-004"; level 2; havana_gene "OTTHUMG00000064980.8"; havana_transcript "OTTHUMT00000139566.4";
chr21	HAVANA	transcript	34131713	34144103	.	-	.	gene_id "ENSG00000159086.10"; transcript_id "ENST00000464256.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GCFC1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GCFC1-007"; level 2; havana_gene "OTTHUMG00000064980.8"; havana_transcript "OTTHUMT00000139569.2";
chr21	HAVANA	transcript	34144411	34171279	.	+	.	gene_id "ENSG00000205930.4"; transcript_id "ENST00000382375.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf49"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf49-001"; level 2; havana_gene "OTTHUMG00000064992.4"; havana_transcript "OTTHUMT00000139600.1";
chr21	HAVANA	transcript	34144436	34170017	.	+	.	gene_id "ENSG00000205930.4"; transcript_id "ENST00000382377.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf49"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf49-002"; level 2; havana_gene "OTTHUMG00000064992.4"; havana_transcript "OTTHUMT00000139601.1";
chr21	HAVANA	transcript	34144461	34266043	.	+	.	gene_id "ENSG00000205930.4"; transcript_id "ENST00000454365.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf49"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C21orf49-007"; level 2; havana_gene "OTTHUMG00000064992.4"; havana_transcript "OTTHUMT00000315803.2";
chr21	HAVANA	transcript	34144472	34224779	.	+	.	gene_id "ENSG00000205930.4"; transcript_id "ENST00000453404.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf49"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf49-004"; level 2; havana_gene "OTTHUMG00000064992.4"; havana_transcript "OTTHUMT00000139603.2";
chr21	HAVANA	transcript	34144473	34169478	.	+	.	gene_id "ENSG00000205930.4"; transcript_id "ENST00000382378.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf49"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf49-005"; level 2; havana_gene "OTTHUMG00000064992.4"; havana_transcript "OTTHUMT00000193338.1";
chr21	HAVANA	transcript	34144485	34169756	.	+	.	gene_id "ENSG00000205930.4"; transcript_id "ENST00000491756.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf49"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf49-003"; level 2; havana_gene "OTTHUMG00000064992.4"; havana_transcript "OTTHUMT00000139602.2";
chr21	HAVANA	transcript	34144499	34169404	.	+	.	gene_id "ENSG00000205930.4"; transcript_id "ENST00000477513.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf49"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf49-006"; level 2; havana_gene "OTTHUMG00000064992.4"; havana_transcript "OTTHUMT00000193339.1";
chr21	HAVANA	transcript	34162985	34180028	.	-	.	gene_id "ENSG00000205929.5"; transcript_id "ENST00000536776.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf62"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf62-003"; level 2; havana_gene "OTTHUMG00000163477.1"; havana_transcript "OTTHUMT00000139598.5";
chr21	HAVANA	transcript	34165875	34186053	.	-	.	gene_id "ENSG00000205929.5"; transcript_id "ENST00000490358.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf62"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf62-001"; level 2; havana_gene "OTTHUMG00000163477.1"; havana_transcript "OTTHUMT00000139596.6";
chr21	HAVANA	transcript	34165876	34185989	.	-	.	gene_id "ENSG00000205929.5"; transcript_id "ENST00000487113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf62"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf62-201"; level 2; havana_gene "OTTHUMG00000163477.1"; havana_transcript "OTTHUMT00000139598.5";
chr21	HAVANA	transcript	34165996	34185999	.	-	.	gene_id "ENSG00000205929.5"; transcript_id "ENST00000382373.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf62"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf62-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000163477.1"; havana_transcript "OTTHUMT00000139599.4";
chr21	HAVANA	transcript	34166032	34185944	.	-	.	gene_id "ENSG00000205929.5"; transcript_id "ENST00000479548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf62"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf62-002"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000163477.1"; havana_transcript "OTTHUMT00000139597.4";
chr21	HAVANA	transcript	34213806	34214121	.	-	.	gene_id "ENSG00000224427.1"; transcript_id "ENST00000444036.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000281.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000281.1-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000064933.1"; havana_transcript "OTTHUMT00000139449.1";
chr21	ENSEMBL	transcript	34214171	34214305	.	-	.	gene_id "ENSG00000207098.1"; transcript_id "ENST00000384370.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA70.11"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA70.11-201"; level 3;
chr21	HAVANA	transcript	34216677	34222244	.	-	.	gene_id "ENSG00000232360.1"; transcript_id "ENST00000427911.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000281.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000281.2-001"; level 2; havana_gene "OTTHUMG00000064934.1"; havana_transcript "OTTHUMT00000139450.1";
chr21	HAVANA	transcript	34285957	34443410	.	-	.	gene_id "ENSG00000227757.1"; transcript_id "ENST00000420356.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000282.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000282.2-002"; level 2; havana_gene "OTTHUMG00000065033.2"; havana_transcript "OTTHUMT00000315806.1";
chr21	HAVANA	transcript	34285957	34443410	.	-	.	gene_id "ENSG00000227757.1"; transcript_id "ENST00000454622.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000282.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000282.2-001"; level 2; havana_gene "OTTHUMG00000065033.2"; havana_transcript "OTTHUMT00000139664.1";
chr21	HAVANA	transcript	34331196	34332874	.	+	.	gene_id "ENSG00000228961.1"; transcript_id "ENST00000424837.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000282.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000282.3-001"; level 2; havana_gene "OTTHUMG00000065034.1"; havana_transcript "OTTHUMT00000139665.1";
chr21	HAVANA	transcript	34398153	34401504	.	+	.	gene_id "ENSG00000205927.4"; transcript_id "ENST00000382357.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OLIG2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OLIG2-001"; level 2; tag "CCDS"; ccdsid "CCDS13620.1"; havana_gene "OTTHUMG00000065032.3"; havana_transcript "OTTHUMT00000139662.2";
chr21	HAVANA	transcript	34398243	34401504	.	+	.	gene_id "ENSG00000205927.4"; transcript_id "ENST00000333337.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OLIG2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OLIG2-002"; level 2; tag "CCDS"; ccdsid "CCDS13620.1"; havana_gene "OTTHUMG00000065032.3"; havana_transcript "OTTHUMT00000139663.1";
chr21	HAVANA	transcript	34398243	34399357	.	+	.	gene_id "ENSG00000205927.4"; transcript_id "ENST00000430860.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OLIG2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OLIG2-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065032.3"; havana_transcript "OTTHUMT00000315807.1";
chr21	HAVANA	transcript	34430135	34437289	.	+	.	gene_id "ENSG00000232539.1"; transcript_id "ENST00000453716.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000288.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000288.2-001"; level 2; havana_gene "OTTHUMG00000065060.1"; havana_transcript "OTTHUMT00000139726.1";
chr21	HAVANA	transcript	34442450	34444726	.	+	.	gene_id "ENSG00000184221.8"; transcript_id "ENST00000382348.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OLIG1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OLIG1-001"; level 2; havana_gene "OTTHUMG00000065064.2"; havana_transcript "OTTHUMT00000139730.1";
chr21	ENSEMBL	transcript	34442450	34444725	.	+	.	gene_id "ENSG00000184221.8"; transcript_id "ENST00000333063.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OLIG1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OLIG1-201"; level 3; tag "CCDS"; ccdsid "CCDS42920.1"; havana_gene "OTTHUMG00000065064.2";
chr21	HAVANA	transcript	34443271	34444719	.	+	.	gene_id "ENSG00000184221.8"; transcript_id "ENST00000426947.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OLIG1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "OLIG1-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065064.2"; havana_transcript "OTTHUMT00000139731.2";
chr21	HAVANA	transcript	34443974	34444719	.	+	.	gene_id "ENSG00000184221.8"; transcript_id "ENST00000498799.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "OLIG1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "OLIG1-003"; level 2; havana_gene "OTTHUMG00000065064.2"; havana_transcript "OTTHUMT00000139732.1";
chr21	HAVANA	transcript	34484005	34496009	.	-	.	gene_id "ENSG00000226527.1"; transcript_id "ENST00000421051.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000289.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000289.6-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000065062.1"; havana_transcript "OTTHUMT00000139728.1";
chr21	HAVANA	transcript	34528938	34531416	.	+	.	gene_id "ENSG00000226433.1"; transcript_id "ENST00000450830.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000290.7"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000290.7-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000065063.1"; havana_transcript "OTTHUMT00000139729.1";
chr21	HAVANA	transcript	34537776	34542954	.	-	.	gene_id "ENSG00000229086.1"; transcript_id "ENST00000440586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf54"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf54-001"; level 2; tag "non-submitted_evidence"; havana_gene "OTTHUMG00000065061.2"; havana_transcript "OTTHUMT00000139727.2";
chr21	ENSEMBL	transcript	34537779	34542541	.	-	.	gene_id "ENSG00000229086.1"; transcript_id "ENST00000451980.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf54"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf54-201"; level 3; havana_gene "OTTHUMG00000065061.2";
chr21	HAVANA	transcript	34602206	34635061	.	+	.	gene_id "ENSG00000159110.14"; transcript_id "ENST00000382264.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IFNAR2-004"; level 2; tag "CCDS"; ccdsid "CCDS13622.1"; havana_gene "OTTHUMG00000065127.37"; havana_transcript "OTTHUMT00000139827.1";
chr21	HAVANA	transcript	34602214	34637969	.	+	.	gene_id "ENSG00000159110.14"; transcript_id "ENST00000404220.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IFNAR2-001"; level 2; tag "CCDS"; ccdsid "CCDS13622.1"; havana_gene "OTTHUMG00000065127.37"; havana_transcript "OTTHUMT00000139824.3";
chr21	HAVANA	transcript	34602231	34636818	.	+	.	gene_id "ENSG00000159110.14"; transcript_id "ENST00000382241.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IFNAR2-002"; level 2; tag "CCDS"; ccdsid "CCDS13621.1"; havana_gene "OTTHUMG00000065127.37"; havana_transcript "OTTHUMT00000139825.1";
chr21	HAVANA	transcript	34602279	34636830	.	+	.	gene_id "ENSG00000159110.14"; transcript_id "ENST00000342136.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IFNAR2-201"; level 2; tag "CCDS"; ccdsid "CCDS13621.1"; havana_gene "OTTHUMG00000065127.37"; havana_transcript "OTTHUMT00000139825.1";
chr21	HAVANA	transcript	34602287	34619158	.	+	.	gene_id "ENSG00000159110.14"; transcript_id "ENST00000420068.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "IFNAR2-020"; level 2; havana_gene "OTTHUMG00000065127.37"; havana_transcript "OTTHUMT00000346298.2";
chr21	HAVANA	transcript	34602441	34636830	.	+	.	gene_id "ENSG00000159110.14"; transcript_id "ENST00000342101.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IFNAR2-003"; level 2; havana_gene "OTTHUMG00000065127.37"; havana_transcript "OTTHUMT00000139826.2";
chr21	HAVANA	transcript	34602446	34635160	.	+	.	gene_id "ENSG00000159110.14"; transcript_id "ENST00000382238.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "IFNAR2-006"; level 2; havana_gene "OTTHUMG00000065127.37"; havana_transcript "OTTHUMT00000139829.2";
chr21	HAVANA	transcript	34602487	34635160	.	+	.	gene_id "ENSG00000159110.14"; transcript_id "ENST00000413881.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IFNAR2-009"; level 2; havana_gene "OTTHUMG00000065127.37"; havana_transcript "OTTHUMT00000193459.2";
chr21	HAVANA	transcript	34602487	34635160	.	+	.	gene_id "ENSG00000159110.14"; transcript_id "ENST00000443073.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IFNAR2-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065127.37"; havana_transcript "OTTHUMT00000193460.2";
chr21	HAVANA	transcript	34602714	34621159	.	+	.	gene_id "ENSG00000159110.14"; transcript_id "ENST00000447980.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IFNAR2-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065127.37"; havana_transcript "OTTHUMT00000193458.36";
chr21	HAVANA	transcript	34621049	34635062	.	+	.	gene_id "ENSG00000159110.14"; transcript_id "ENST00000417007.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "IFNAR2-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065127.37"; havana_transcript "OTTHUMT00000139830.5";
chr21	HAVANA	transcript	34619079	34655517	.	+	.	gene_id "ENSG00000249624.2"; transcript_id "ENST00000433395.2"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP000295.9"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000295.9-001"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000162031.2"; havana_transcript "OTTHUMT00000366943.2";
chr21	HAVANA	transcript	34619118	34649006	.	+	.	gene_id "ENSG00000249624.2"; transcript_id "ENST00000435704.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP000295.9"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AP000295.9-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000162031.2"; havana_transcript "OTTHUMT00000334568.1";
chr21	HAVANA	transcript	34619157	34656082	.	+	.	gene_id "ENSG00000249624.2"; transcript_id "ENST00000451624.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP000295.9"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AP000295.9-004"; level 2; havana_gene "OTTHUMG00000162031.2"; havana_transcript "OTTHUMT00000333866.2";
chr21	HAVANA	transcript	34621020	34655517	.	+	.	gene_id "ENSG00000249624.2"; transcript_id "ENST00000432231.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP000295.9"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AP000295.9-003"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000162031.2"; havana_transcript "OTTHUMT00000267922.1";
chr21	HAVANA	transcript	34636178	34638565	.	-	.	gene_id "ENSG00000223799.1"; transcript_id "ENST00000411998.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000295.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000295.7-001"; level 2; havana_gene "OTTHUMG00000065125.1"; havana_transcript "OTTHUMT00000139822.1";
chr21	HAVANA	transcript	34638663	34669539	.	+	.	gene_id "ENSG00000243646.3"; transcript_id "ENST00000290200.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL10RB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL10RB-001"; level 2; tag "CCDS"; ccdsid "CCDS13623.1"; havana_gene "OTTHUMG00000065128.7"; havana_transcript "OTTHUMT00000139831.3";
chr21	HAVANA	transcript	34638687	34668544	.	+	.	gene_id "ENSG00000243646.3"; transcript_id "ENST00000422891.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL10RB"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "IL10RB-003"; level 2; havana_gene "OTTHUMG00000065128.7"; havana_transcript "OTTHUMT00000139833.4";
chr21	ENSEMBL	transcript	34638764	34669043	.	+	.	gene_id "ENSG00000243646.3"; transcript_id "ENST00000539894.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL10RB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IL10RB-201"; level 3; havana_gene "OTTHUMG00000065128.7";
chr21	HAVANA	transcript	34640233	34669258	.	+	.	gene_id "ENSG00000243646.3"; transcript_id "ENST00000493295.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL10RB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "IL10RB-002"; level 2; havana_gene "OTTHUMG00000065128.7"; havana_transcript "OTTHUMT00000139832.3";
chr21	HAVANA	transcript	34640587	34660425	.	+	.	gene_id "ENSG00000243646.3"; transcript_id "ENST00000498371.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL10RB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "IL10RB-005"; level 2; havana_gene "OTTHUMG00000065128.7"; havana_transcript "OTTHUMT00000193461.1";
chr21	HAVANA	transcript	34648917	34668655	.	+	.	gene_id "ENSG00000243646.3"; transcript_id "ENST00000451065.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IL10RB"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "IL10RB-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065128.7"; havana_transcript "OTTHUMT00000139834.2";
chr21	ENSEMBL	transcript	34696734	34727997	.	+	.	gene_id "ENSG00000142166.8"; transcript_id "ENST00000416947.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IFNAR1-201"; level 3; havana_gene "OTTHUMG00000065126.8";
chr21	HAVANA	transcript	34696782	34707917	.	+	.	gene_id "ENSG00000142166.8"; transcript_id "ENST00000493503.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "IFNAR1-002"; level 2; havana_gene "OTTHUMG00000065126.8"; havana_transcript "OTTHUMT00000267942.1";
chr21	HAVANA	transcript	34697209	34732168	.	+	.	gene_id "ENSG00000142166.8"; transcript_id "ENST00000270139.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IFNAR1-001"; level 2; tag "CCDS"; ccdsid "CCDS13624.1"; havana_gene "OTTHUMG00000065126.8"; havana_transcript "OTTHUMT00000139823.4";
chr21	HAVANA	transcript	34697278	34717583	.	+	.	gene_id "ENSG00000142166.8"; transcript_id "ENST00000442071.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "IFNAR1-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065126.8"; havana_transcript "OTTHUMT00000315813.1";
chr21	ENSEMBL	transcript	34697278	34728159	.	+	.	gene_id "ENSG00000142166.8"; transcript_id "ENST00000442357.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNAR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IFNAR1-202"; level 3; havana_gene "OTTHUMG00000065126.8";
chr21	HAVANA	transcript	34706877	34707402	.	+	.	gene_id "ENSG00000226501.2"; transcript_id "ENST00000451645.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "USF1P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "USF1P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000065124.1"; havana_transcript "OTTHUMT00000139821.1";
chr21	HAVANA	transcript	34757299	34787251	.	+	.	gene_id "ENSG00000159128.8"; transcript_id "ENST00000472188.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNGR2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "IFNGR2-006"; level 2; havana_gene "OTTHUMG00000065188.5"; havana_transcript "OTTHUMT00000267943.1";
chr21	HAVANA	transcript	34775202	34809828	.	+	.	gene_id "ENSG00000159128.8"; transcript_id "ENST00000290219.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNGR2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "IFNGR2-001"; level 2; tag "CCDS"; ccdsid "CCDS33544.1"; havana_gene "OTTHUMG00000065188.5"; havana_transcript "OTTHUMT00000139916.1";
chr21	HAVANA	transcript	34775733	34804523	.	+	.	gene_id "ENSG00000159128.8"; transcript_id "ENST00000439213.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNGR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "IFNGR2-003"; level 2; havana_gene "OTTHUMG00000065188.5"; havana_transcript "OTTHUMT00000139918.2";
chr21	HAVANA	transcript	34775738	34809828	.	+	.	gene_id "ENSG00000159128.8"; transcript_id "ENST00000381995.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNGR2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "IFNGR2-002"; level 2; havana_gene "OTTHUMG00000065188.5"; havana_transcript "OTTHUMT00000139917.1";
chr21	HAVANA	transcript	34775747	34809251	.	+	.	gene_id "ENSG00000159128.8"; transcript_id "ENST00000457700.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNGR2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "IFNGR2-004"; level 2; havana_gene "OTTHUMG00000065188.5"; havana_transcript "OTTHUMT00000139919.3";
chr21	HAVANA	transcript	34775772	34809809	.	+	.	gene_id "ENSG00000159128.8"; transcript_id "ENST00000405436.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNGR2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IFNGR2-007"; level 2; havana_gene "OTTHUMG00000065188.5"; havana_transcript "OTTHUMT00000319375.1";
chr21	HAVANA	transcript	34804626	34851655	.	+	.	gene_id "ENSG00000159128.8"; transcript_id "ENST00000421802.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IFNGR2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "IFNGR2-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065188.5"; havana_transcript "OTTHUMT00000140078.2";
chr21	HAVANA	transcript	34804792	34821271	.	-	.	gene_id "ENSG00000142188.9"; transcript_id "ENST00000484377.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMEM50B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM50B-009"; level 2; havana_gene "OTTHUMG00000065286.11"; havana_transcript "OTTHUMT00000140268.1";
chr21	HAVANA	transcript	34804792	34852250	.	-	.	gene_id "ENSG00000142188.9"; transcript_id "ENST00000420455.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMEM50B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TMEM50B-002"; level 2; tag "CCDS"; ccdsid "CCDS13625.1"; havana_gene "OTTHUMG00000065286.11"; havana_transcript "OTTHUMT00000140079.4";
chr21	HAVANA	transcript	34805105	34821717	.	-	.	gene_id "ENSG00000142188.9"; transcript_id "ENST00000470682.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMEM50B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM50B-007"; level 2; havana_gene "OTTHUMG00000065286.11"; havana_transcript "OTTHUMT00000140266.1";
chr21	HAVANA	transcript	34809191	34821496	.	-	.	gene_id "ENSG00000142188.9"; transcript_id "ENST00000468874.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMEM50B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMEM50B-008"; level 2; havana_gene "OTTHUMG00000065286.11"; havana_transcript "OTTHUMT00000140267.3";
chr21	HAVANA	transcript	34821442	34852318	.	-	.	gene_id "ENSG00000142188.9"; transcript_id "ENST00000381964.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMEM50B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMEM50B-001"; level 2; tag "CCDS"; ccdsid "CCDS13625.1"; havana_gene "OTTHUMG00000065286.11"; havana_transcript "OTTHUMT00000140080.5";
chr21	HAVANA	transcript	34822828	34841233	.	-	.	gene_id "ENSG00000142188.9"; transcript_id "ENST00000441128.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMEM50B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TMEM50B-011"; level 2; havana_gene "OTTHUMG00000065286.11"; havana_transcript "OTTHUMT00000337117.1";
chr21	HAVANA	transcript	34822854	34852243	.	-	.	gene_id "ENSG00000142188.9"; transcript_id "ENST00000442441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMEM50B"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TMEM50B-004"; level 2; havana_gene "OTTHUMG00000065286.11"; havana_transcript "OTTHUMT00000140082.4";
chr21	ENSEMBL	transcript	34832661	34852233	.	-	.	gene_id "ENSG00000142188.9"; transcript_id "ENST00000440644.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMEM50B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMEM50B-201"; level 3; havana_gene "OTTHUMG00000065286.11";
chr21	HAVANA	transcript	34837325	34839442	.	-	.	gene_id "ENSG00000142188.9"; transcript_id "ENST00000474272.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMEM50B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM50B-006"; level 2; havana_gene "OTTHUMG00000065286.11"; havana_transcript "OTTHUMT00000140265.1";
chr21	HAVANA	transcript	34837685	34851596	.	-	.	gene_id "ENSG00000142188.9"; transcript_id "ENST00000432504.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMEM50B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMEM50B-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065286.11"; havana_transcript "OTTHUMT00000140083.2";
chr21	HAVANA	transcript	34839342	34853499	.	-	.	gene_id "ENSG00000142188.9"; transcript_id "ENST00000435619.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMEM50B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMEM50B-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065286.11"; havana_transcript "OTTHUMT00000267923.1";
chr21	HAVANA	transcript	34840727	34852255	.	-	.	gene_id "ENSG00000142188.9"; transcript_id "ENST00000459909.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMEM50B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMEM50B-003"; level 2; havana_gene "OTTHUMG00000065286.11"; havana_transcript "OTTHUMT00000140081.1";
chr21	ENSEMBL	transcript	34804794	34806958	.	-	.	gene_id "ENSG00000256871.1"; transcript_id "ENST00000538381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP000300.3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP000300.3-201"; level 3;
chr21	HAVANA	transcript	34853887	34854502	.	-	.	gene_id "ENSG00000215088.3"; transcript_id "ENST00000414617.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPS5P3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPS5P3-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000065532.1"; havana_transcript "OTTHUMT00000140457.1";
chr21	HAVANA	transcript	34854806	34856565	.	-	.	gene_id "ENSG00000231355.1"; transcript_id "ENST00000450928.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000302.58"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000302.58-001"; level 2; havana_gene "OTTHUMG00000065530.1"; havana_transcript "OTTHUMT00000140453.1";
chr21	HAVANA	transcript	34860497	34864027	.	-	.	gene_id "ENSG00000177692.7"; transcript_id "ENST00000381947.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DNAJC28"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DNAJC28-002"; level 2; tag "CCDS"; ccdsid "CCDS13626.1"; havana_gene "OTTHUMG00000065531.6"; havana_transcript "OTTHUMT00000140455.2";
chr21	HAVANA	transcript	34860515	34863780	.	-	.	gene_id "ENSG00000177692.7"; transcript_id "ENST00000314399.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DNAJC28"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DNAJC28-001"; level 2; tag "CCDS"; ccdsid "CCDS13626.1"; havana_gene "OTTHUMG00000065531.6"; havana_transcript "OTTHUMT00000140454.3";
chr21	HAVANA	transcript	34860526	34863998	.	-	.	gene_id "ENSG00000177692.7"; transcript_id "ENST00000402202.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DNAJC28"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DNAJC28-004"; level 2; tag "CCDS"; ccdsid "CCDS13626.1"; havana_gene "OTTHUMG00000065531.6"; havana_transcript "OTTHUMT00000319040.1";
chr21	HAVANA	transcript	34870940	34883664	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000414353.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GART-021"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000333736.1";
chr21	HAVANA	transcript	34870940	34906983	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000492008.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "GART-020"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000329191.1";
chr21	HAVANA	transcript	34876238	34914444	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000381815.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GART-003"; level 2; tag "CCDS"; ccdsid "CCDS13627.1"; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140628.2";
chr21	HAVANA	transcript	34876238	34915148	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000381831.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GART-001"; level 2; tag "CCDS"; ccdsid "CCDS13627.1"; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140626.3";
chr21	HAVANA	transcript	34876238	34915167	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000381839.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GART-006"; level 2; tag "CCDS"; ccdsid "CCDS13627.1"; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140631.3";
chr21	HAVANA	transcript	34876240	34915198	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000424203.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GART-002"; level 2; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140627.4";
chr21	ENSEMBL	transcript	34876399	34895411	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000543717.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GART-201"; level 3; havana_gene "OTTHUMG00000065628.23";
chr21	HAVANA	transcript	34878347	34882640	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000482663.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GART-018"; level 2; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140968.1";
chr21	HAVANA	transcript	34881495	34883611	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000487155.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GART-019"; level 2; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000315804.1";
chr21	HAVANA	transcript	34892829	34897135	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000460305.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "GART-005"; level 2; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140630.1";
chr21	HAVANA	transcript	34894498	34901070	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000467575.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GART-016"; level 2; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140966.1";
chr21	HAVANA	transcript	34896316	34914420	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000361093.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GART-004"; level 2; tag "CCDS"; ccdsid "CCDS13628.1"; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140629.3";
chr21	HAVANA	transcript	34900572	34906936	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000366093.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "GART-014"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140691.3";
chr21	HAVANA	transcript	34900869	34903588	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000466882.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GART-015"; level 2; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140965.1";
chr21	HAVANA	transcript	34903016	34906985	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000497313.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "GART-012"; level 2; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140689.1";
chr21	HAVANA	transcript	34903065	34915797	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000430874.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GART-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140684.21";
chr21	HAVANA	transcript	34903093	34915099	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000426819.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GART-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140686.1";
chr21	HAVANA	transcript	34903642	34914385	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000476524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GART-011"; level 2; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140688.1";
chr21	HAVANA	transcript	34904079	34906978	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000488791.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "GART-013"; level 2; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140690.1";
chr21	HAVANA	transcript	34906885	34915126	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000438059.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GART-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140685.21";
chr21	HAVANA	transcript	34906893	34914669	.	-	.	gene_id "ENSG00000159131.11"; transcript_id "ENST00000441403.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "GART"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "GART-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065628.23"; havana_transcript "OTTHUMT00000140687.1";
chr21	HAVANA	transcript	34890917	34891415	.	-	.	gene_id "ENSG00000233956.1"; transcript_id "ENST00000448054.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BTF3P6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "BTF3P6-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000065805.1"; havana_transcript "OTTHUMT00000140976.1";
chr21	HAVANA	transcript	34914924	34949787	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000356577.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SON-001"; level 2; tag "CCDS"; ccdsid "CCDS13629.1"; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000140978.2";
chr21	HAVANA	transcript	34915350	34949812	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000290239.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SON-004"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000140980.3";
chr21	HAVANA	transcript	34915358	34919058	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000475072.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SON-010"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141091.1";
chr21	HAVANA	transcript	34915358	34949787	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000381692.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SON-002"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000140977.2";
chr21	HAVANA	transcript	34915370	34932973	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000300278.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SON-003"; level 2; tag "CCDS"; ccdsid "CCDS13631.1"; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000140979.2";
chr21	HAVANA	transcript	34915370	34949787	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000455528.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SON-201"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000140980.3";
chr21	HAVANA	transcript	34915371	34931362	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000381679.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SON-006"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000140982.3";
chr21	HAVANA	transcript	34915376	34919345	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000492229.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SON-011"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141092.1";
chr21	HAVANA	transcript	34924554	34949787	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000436227.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SON-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141088.2";
chr21	HAVANA	transcript	34927355	34939773	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000421541.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SON-008"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141089.2";
chr21	HAVANA	transcript	34939466	34945665	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000429093.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SON-023"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000320942.1";
chr21	HAVANA	transcript	34939485	34941589	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000474355.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SON-012"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141093.1";
chr21	HAVANA	transcript	34939491	34948819	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000457208.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SON-013"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141094.2";
chr21	HAVANA	transcript	34942082	34948790	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000467616.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SON-019"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141100.1";
chr21	HAVANA	transcript	34944041	34948753	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000484294.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SON-017"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141098.1";
chr21	HAVANA	transcript	34944041	34948775	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000473102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "SON-018"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141099.1";
chr21	HAVANA	transcript	34944175	34949070	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000470533.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SON-022"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000319039.1";
chr21	HAVANA	transcript	34944519	34949787	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000478183.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SON-009"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141090.1";
chr21	HAVANA	transcript	34944833	34949187	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000465834.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SON-014"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141095.1";
chr21	HAVANA	transcript	34945331	34948822	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000477419.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SON-015"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141096.1";
chr21	HAVANA	transcript	34945520	34949288	.	+	.	gene_id "ENSG00000159140.12"; transcript_id "ENST00000491794.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SON"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SON-016"; level 2; havana_gene "OTTHUMG00000065806.5"; havana_transcript "OTTHUMT00000141097.1";
chr21	HAVANA	transcript	34931848	34950669	.	-	.	gene_id "ENSG00000240368.1"; transcript_id "ENST00000439593.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000304.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000304.2-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000065868.1"; havana_transcript "OTTHUMT00000141101.1";
chr21	HAVANA	transcript	34947783	34960976	.	-	.	gene_id "ENSG00000159147.12"; transcript_id "ENST00000303113.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DONSON"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DONSON-008"; level 2; havana_gene "OTTHUMG00000065904.7"; havana_transcript "OTTHUMT00000141174.2";
chr21	HAVANA	transcript	34949842	34960952	.	-	.	gene_id "ENSG00000159147.12"; transcript_id "ENST00000453626.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DONSON"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DONSON-014"; level 2; havana_gene "OTTHUMG00000065904.7"; havana_transcript "OTTHUMT00000337114.1";
chr21	HAVANA	transcript	34949867	34960952	.	-	.	gene_id "ENSG00000159147.12"; transcript_id "ENST00000457359.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DONSON"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DONSON-007"; level 2; tag "not_organism-supported"; havana_gene "OTTHUMG00000065904.7"; havana_transcript "OTTHUMT00000141173.2";
chr21	HAVANA	transcript	34950211	34961014	.	-	.	gene_id "ENSG00000159147.12"; transcript_id "ENST00000303071.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DONSON"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DONSON-001"; level 2; tag "CCDS"; ccdsid "CCDS13632.1"; havana_gene "OTTHUMG00000065904.7"; havana_transcript "OTTHUMT00000141184.1";
chr21	HAVANA	transcript	34950223	34960976	.	-	.	gene_id "ENSG00000159147.12"; transcript_id "ENST00000417871.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DONSON"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DONSON-004"; level 2; havana_gene "OTTHUMG00000065904.7"; havana_transcript "OTTHUMT00000141156.2";
chr21	HAVANA	transcript	34950230	34951920	.	-	.	gene_id "ENSG00000159147.12"; transcript_id "ENST00000460557.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DONSON"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DONSON-010"; level 2; havana_gene "OTTHUMG00000065904.7"; havana_transcript "OTTHUMT00000141176.1";
chr21	HAVANA	transcript	34950248	34959908	.	-	.	gene_id "ENSG00000159147.12"; transcript_id "ENST00000444517.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DONSON"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DONSON-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065904.7"; havana_transcript "OTTHUMT00000141171.2";
chr21	HAVANA	transcript	34950248	34959908	.	-	.	gene_id "ENSG00000159147.12"; transcript_id "ENST00000442660.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DONSON"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DONSON-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065904.7"; havana_transcript "OTTHUMT00000141172.2";
chr21	HAVANA	transcript	34950507	34960940	.	-	.	gene_id "ENSG00000159147.12"; transcript_id "ENST00000437395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DONSON"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DONSON-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065904.7"; havana_transcript "OTTHUMT00000141185.1";
chr21	HAVANA	transcript	34950548	34961012	.	-	.	gene_id "ENSG00000159147.12"; transcript_id "ENST00000432378.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DONSON"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DONSON-013"; level 2; havana_gene "OTTHUMG00000065904.7"; havana_transcript "OTTHUMT00000337113.1";
chr21	HAVANA	transcript	34951830	34958464	.	-	.	gene_id "ENSG00000159147.12"; transcript_id "ENST00000440810.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DONSON"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DONSON-009"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065904.7"; havana_transcript "OTTHUMT00000141175.1";
chr21	HAVANA	transcript	34953481	34954360	.	-	.	gene_id "ENSG00000159147.12"; transcript_id "ENST00000462566.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DONSON"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DONSON-011"; level 2; havana_gene "OTTHUMG00000065904.7"; havana_transcript "OTTHUMT00000141177.1";
chr21	HAVANA	transcript	34956993	35284635	.	-	.	gene_id "ENSG00000249209.1"; transcript_id "ENST00000429238.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP000304.12"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000304.12-001"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000162259.1"; havana_transcript "OTTHUMT00000368258.1";
chr21	HAVANA	transcript	34961647	35014066	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000381554.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRYZL1-001"; level 2; tag "CCDS"; ccdsid "CCDS13633.2"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141282.2";
chr21	HAVANA	transcript	34961692	35014224	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000290244.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CRYZL1-007"; level 2; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141364.1";
chr21	HAVANA	transcript	34961767	34964024	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000468349.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CRYZL1-023"; level 2; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141380.1";
chr21	HAVANA	transcript	34961773	35014053	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000381540.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CRYZL1-002"; level 2; tag "non_canonical_TEC"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141279.3";
chr21	HAVANA	transcript	34961774	34985866	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000452420.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRYZL1-009"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141366.2";
chr21	HAVANA	transcript	34961851	34971457	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000441940.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CRYZL1-021"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141378.2";
chr21	HAVANA	transcript	34961866	34969706	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000480893.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CRYZL1-022"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141379.1";
chr21	HAVANA	transcript	34961923	35014036	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000445393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "CRYZL1-024"; level 2; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000337118.1";
chr21	HAVANA	transcript	34962075	34974571	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000437996.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRYZL1-019"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141376.3";
chr21	HAVANA	transcript	34966813	35014065	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000361534.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CRYZL1-003"; level 2; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141280.4";
chr21	HAVANA	transcript	34966949	35014047	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000429827.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRYZL1-006"; level 2; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141283.3";
chr21	HAVANA	transcript	34966968	35014644	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000420072.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "CRYZL1-201"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141278.3";
chr21	HAVANA	transcript	34966968	35014644	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000452332.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRYZL1-005"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141278.3";
chr21	HAVANA	transcript	34967437	34994348	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000440526.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CRYZL1-017"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141374.2";
chr21	HAVANA	transcript	34967643	34974562	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000479964.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CRYZL1-020"; level 2; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141377.2";
chr21	HAVANA	transcript	34968368	34975754	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000414079.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CRYZL1-018"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141375.2";
chr21	HAVANA	transcript	34971502	35014051	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000426935.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CRYZL1-012"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141369.3";
chr21	HAVANA	transcript	34974573	35006008	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000431177.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRYZL1-013"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141370.3";
chr21	HAVANA	transcript	34974638	34989482	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000488167.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CRYZL1-015"; level 2; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141372.1";
chr21	HAVANA	transcript	34974639	35014036	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000417979.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CRYZL1-014"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141371.2";
chr21	HAVANA	transcript	34975462	35014026	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000490714.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CRYZL1-016"; level 2; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141373.1";
chr21	HAVANA	transcript	34988593	35014028	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000413017.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CRYZL1-008"; level 2; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141365.2";
chr21	HAVANA	transcript	35003799	35016232	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000438788.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRYZL1-011"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141368.2";
chr21	HAVANA	transcript	35012051	35014027	.	-	.	gene_id "ENSG00000205758.6"; transcript_id "ENST00000399442.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYZL1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CRYZL1-004"; level 2; havana_gene "OTTHUMG00000065954.10"; havana_transcript "OTTHUMT00000141281.2";
chr21	HAVANA	transcript	35014706	35209322	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000399353.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ITSN1-025"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000313584.1";
chr21	HAVANA	transcript	35014758	35107509	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000444491.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITSN1-033"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000315800.24";
chr21	HAVANA	transcript	35014759	35094296	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000470742.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ITSN1-034"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000315801.2";
chr21	HAVANA	transcript	35014764	35272165	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000381318.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITSN1-001"; level 2; tag "CCDS"; ccdsid "CCDS33545.1"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000140070.4";
chr21	HAVANA	transcript	35014784	35210798	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000381291.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITSN1-002"; level 2; tag "CCDS"; ccdsid "CCDS33546.1"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000140071.2";
chr21	ENSEMBL	transcript	35014784	35261609	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000381285.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITSN1-202"; level 3; havana_gene "OTTHUMG00000065284.32";
chr21	ENSEMBL	transcript	35014784	35261609	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000381288.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITSN1-203"; level 3; havana_gene "OTTHUMG00000065284.32";
chr21	ENSEMBL	transcript	35014784	35201294	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000381289.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITSN1-204"; level 3; havana_gene "OTTHUMG00000065284.32";
chr21	HAVANA	transcript	35014789	35260912	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000399367.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ITSN1-023"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000313582.1";
chr21	HAVANA	transcript	35014802	35210802	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000399352.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ITSN1-024"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000313583.1";
chr21	HAVANA	transcript	35014804	35209597	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000399355.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ITSN1-037"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000337115.1";
chr21	HAVANA	transcript	35014804	35210800	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000399349.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ITSN1-003"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000140072.4";
chr21	HAVANA	transcript	35014848	35107398	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000451686.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITSN1-032"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000315799.1";
chr21	HAVANA	transcript	35091102	35144586	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000381283.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ITSN1-036"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000319097.1";
chr21	ENSEMBL	transcript	35091115	35189918	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000399338.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITSN1-206"; level 3; havana_gene "OTTHUMG00000065284.32";
chr21	ENSEMBL	transcript	35091133	35260612	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000437442.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITSN1-207"; level 3; havana_gene "OTTHUMG00000065284.32";
chr21	ENSEMBL	transcript	35091133	35260612	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000399326.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITSN1-205"; level 3; havana_gene "OTTHUMG00000065284.32";
chr21	ENSEMBL	transcript	35091133	35209342	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000379960.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITSN1-201"; level 3; havana_gene "OTTHUMG00000065284.32";
chr21	HAVANA	transcript	35107346	35107931	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000456489.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ITSN1-017"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000141009.2";
chr21	HAVANA	transcript	35126488	35144604	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000488166.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ITSN1-019"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000141011.2";
chr21	HAVANA	transcript	35146667	35147383	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000474132.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ITSN1-021"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000193775.1";
chr21	HAVANA	transcript	35169858	35189720	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000419241.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ITSN1-038"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000337116.1";
chr21	HAVANA	transcript	35172227	35190040	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000440794.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ITSN1-030"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000313586.2";
chr21	HAVANA	transcript	35183508	35186811	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000465143.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ITSN1-035"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000315802.1";
chr21	HAVANA	transcript	35190330	35201333	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000487427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ITSN1-007"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000140999.3";
chr21	HAVANA	transcript	35190687	35206700	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000437126.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ITSN1-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000140998.4";
chr21	HAVANA	transcript	35190756	35201990	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000428240.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ITSN1-016"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000141008.4";
chr21	HAVANA	transcript	35201310	35209342	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000472548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ITSN1-008"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000141000.2";
chr21	HAVANA	transcript	35201310	35209342	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000479424.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ITSN1-010"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000141002.1";
chr21	HAVANA	transcript	35201310	35209342	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000462212.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ITSN1-013"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000141005.1";
chr21	HAVANA	transcript	35201310	35229097	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000495656.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ITSN1-009"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000141001.2";
chr21	HAVANA	transcript	35201310	35229097	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000475422.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ITSN1-011"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000141003.1";
chr21	HAVANA	transcript	35201310	35229097	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000489261.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ITSN1-012"; level 2; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000141004.1";
chr21	HAVANA	transcript	35231001	35258658	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000381284.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ITSN1-004"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000140996.2";
chr21	HAVANA	transcript	35247662	35258681	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000420666.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ITSN1-031"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000313587.3";
chr21	HAVANA	transcript	35247664	35258658	.	+	.	gene_id "ENSG00000205726.8"; transcript_id "ENST00000415023.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITSN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ITSN1-005"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000065284.32"; havana_transcript "OTTHUMT00000140997.2";
chr21	HAVANA	transcript	35275757	35288065	.	-	.	gene_id "ENSG00000241837.2"; transcript_id "ENST00000431254.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5O"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ATP5O-003"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065186.10"; havana_transcript "OTTHUMT00000139909.4";
chr21	HAVANA	transcript	35275757	35288072	.	-	.	gene_id "ENSG00000241837.2"; transcript_id "ENST00000491703.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5O"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP5O-002"; level 2; havana_gene "OTTHUMG00000065186.10"; havana_transcript "OTTHUMT00000139908.4";
chr21	HAVANA	transcript	35275757	35288284	.	-	.	gene_id "ENSG00000241837.2"; transcript_id "ENST00000290299.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5O"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ATP5O-001"; level 2; tag "CCDS"; ccdsid "CCDS13634.1"; havana_gene "OTTHUMG00000065186.10"; havana_transcript "OTTHUMT00000139907.1";
chr21	HAVANA	transcript	35275760	35279716	.	-	.	gene_id "ENSG00000241837.2"; transcript_id "ENST00000417181.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5O"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ATP5O-009"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065186.10"; havana_transcript "OTTHUMT00000315811.2";
chr21	HAVANA	transcript	35275760	35281399	.	-	.	gene_id "ENSG00000241837.2"; transcript_id "ENST00000418933.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5O"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ATP5O-010"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065186.10"; havana_transcript "OTTHUMT00000315812.1";
chr21	HAVANA	transcript	35275761	35279720	.	-	.	gene_id "ENSG00000241837.2"; transcript_id "ENST00000429064.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5O"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ATP5O-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000065186.10"; havana_transcript "OTTHUMT00000319096.1";
chr21	HAVANA	transcript	35281118	35288057	.	-	.	gene_id "ENSG00000241837.2"; transcript_id "ENST00000495005.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5O"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ATP5O-004"; level 2; havana_gene "OTTHUMG00000065186.10"; havana_transcript "OTTHUMT00000139910.2";
chr21	HAVANA	transcript	35284671	35288028	.	-	.	gene_id "ENSG00000241837.2"; transcript_id "ENST00000496044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5O"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ATP5O-007"; level 2; havana_gene "OTTHUMG00000065186.10"; havana_transcript "OTTHUMT00000267941.2";
chr21	HAVANA	transcript	35284671	35288028	.	-	.	gene_id "ENSG00000241837.2"; transcript_id "ENST00000484627.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5O"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ATP5O-011"; level 2; havana_gene "OTTHUMG00000065186.10"; havana_transcript "OTTHUMT00000319095.1";
chr21	HAVANA	transcript	35284682	35288083	.	-	.	gene_id "ENSG00000241837.2"; transcript_id "ENST00000487374.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ATP5O"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ATP5O-008"; level 2; havana_gene "OTTHUMG00000065186.10"; havana_transcript "OTTHUMT00000315810.1";
chr21	ENSEMBL	transcript	35291015	35291097	.	-	.	gene_id "ENSG00000240113.1"; transcript_id "ENST00000486213.1"; gene_type "scRNA_pseudogene"; gene_status "NOVEL"; gene_name "AP000313.1"; transcript_type "scRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AP000313.1-201"; level 3;
chr21	ENSEMBL	transcript	35291421	35291641	.	-	.	gene_id "ENSG00000244294.1"; transcript_id "ENST00000467060.1"; gene_type "scRNA_pseudogene"; gene_status "NOVEL"; gene_name "AP000313.2"; transcript_type "scRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AP000313.2-201"; level 3;
chr21	HAVANA	transcript	35303464	35349992	.	+	.	gene_id "ENSG00000237945.1"; transcript_id "ENST00000427447.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000569.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000569.8-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000065819.4"; havana_transcript "OTTHUMT00000141032.3";
chr21	HAVANA	transcript	35303518	35343487	.	+	.	gene_id "ENSG00000237945.1"; transcript_id "ENST00000400353.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000569.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000569.8-002"; level 2; havana_gene "OTTHUMG00000065819.4"; havana_transcript "OTTHUMT00000193773.1";
chr21	HAVANA	transcript	35321230	35336260	.	+	.	gene_id "ENSG00000205673.1"; transcript_id "ENST00000381181.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000569.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000569.2-001"; level 2; havana_gene "OTTHUMG00000085959.1"; havana_transcript "OTTHUMT00000193777.1";
chr21	HAVANA	transcript	35445524	35515334	.	+	.	gene_id "ENSG00000243927.1"; transcript_id "ENST00000488492.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPS6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MRPS6-005"; level 2; havana_gene "OTTHUMG00000065820.2"; havana_transcript "OTTHUMT00000193779.1";
chr21	HAVANA	transcript	35445823	35515334	.	+	.	gene_id "ENSG00000243927.1"; transcript_id "ENST00000399312.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPS6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MRPS6-001"; level 2; tag "CCDS"; ccdsid "CCDS33548.1"; havana_gene "OTTHUMG00000065820.2"; havana_transcript "OTTHUMT00000141033.1";
chr21	HAVANA	transcript	35445849	35515334	.	+	.	gene_id "ENSG00000243927.1"; transcript_id "ENST00000477091.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPS6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MRPS6-004"; level 2; havana_gene "OTTHUMG00000065820.2"; havana_transcript "OTTHUMT00000141036.2";
chr21	HAVANA	transcript	35494474	35515334	.	+	.	gene_id "ENSG00000243927.1"; transcript_id "ENST00000483977.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPS6"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MRPS6-002"; level 2; havana_gene "OTTHUMG00000065820.2"; havana_transcript "OTTHUMT00000141034.2";
chr21	HAVANA	transcript	35496253	35515334	.	+	.	gene_id "ENSG00000243927.1"; transcript_id "ENST00000482679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MRPS6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MRPS6-003"; level 2; havana_gene "OTTHUMG00000065820.2"; havana_transcript "OTTHUMT00000141035.2";
chr21	HAVANA	transcript	35445870	35478559	.	+	.	gene_id "ENSG00000198743.5"; transcript_id "ENST00000381151.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC5A3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC5A3-001"; level 2; tag "CCDS"; ccdsid "CCDS33549.1"; havana_gene "OTTHUMG00000065821.1"; havana_transcript "OTTHUMT00000141037.1";
chr21	HAVANA	transcript	35445892	35732332	.	+	.	gene_id "ENSG00000214955.4"; transcript_id "ENST00000362077.4"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000318.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000318.2-002"; level 2; havana_gene "OTTHUMG00000086188.1"; havana_transcript "OTTHUMT00000194067.1";
chr21	HAVANA	transcript	35577356	35697334	.	+	.	gene_id "ENSG00000214955.4"; transcript_id "ENST00000427022.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000318.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000318.2-001"; level 2; havana_gene "OTTHUMG00000086188.1"; havana_transcript "OTTHUMT00000194066.1";
chr21	HAVANA	transcript	35507732	35508371	.	-	.	gene_id "ENSG00000224598.1"; transcript_id "ENST00000415238.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPS5P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPS5P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000065822.1"; havana_transcript "OTTHUMT00000141038.1";
chr21	HAVANA	transcript	35552978	35555546	.	+	.	gene_id "ENSG00000227456.2"; transcript_id "ENST00000428914.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf82"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf82-001"; level 2; havana_gene "OTTHUMG00000086190.1"; havana_transcript "OTTHUMT00000194069.1";
chr21	HAVANA	transcript	35553045	35560863	.	+	.	gene_id "ENSG00000227456.2"; transcript_id "ENST00000416145.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf82"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf82-002"; level 2; havana_gene "OTTHUMG00000086190.1"; havana_transcript "OTTHUMT00000194070.1";
chr21	HAVANA	transcript	35553049	35562220	.	+	.	gene_id "ENSG00000227456.2"; transcript_id "ENST00000430922.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf82"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf82-004"; level 2; havana_gene "OTTHUMG00000086190.1"; havana_transcript "OTTHUMT00000194072.1";
chr21	HAVANA	transcript	35560649	35561498	.	+	.	gene_id "ENSG00000227456.2"; transcript_id "ENST00000419881.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf82"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf82-003"; level 2; havana_gene "OTTHUMG00000086190.1"; havana_transcript "OTTHUMT00000194071.1";
chr21	HAVANA	transcript	35736323	35743440	.	+	.	gene_id "ENSG00000159197.2"; transcript_id "ENST00000290310.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNE2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNE2-001"; level 2; tag "CCDS"; ccdsid "CCDS13635.1"; havana_gene "OTTHUMG00000086189.1"; havana_transcript "OTTHUMT00000194068.1";
chr21	HAVANA	transcript	35743101	35747647	.	-	.	gene_id "ENSG00000225555.1"; transcript_id "ENST00000440403.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000320.6"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000320.6-001"; level 2; havana_gene "OTTHUMG00000086192.1"; havana_transcript "OTTHUMT00000194074.1";
chr21	HAVANA	transcript	35747779	35775075	.	+	.	gene_id "ENSG00000205670.6"; transcript_id "ENST00000481710.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM165B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM165B-001"; level 2; havana_gene "OTTHUMG00000086193.2"; havana_transcript "OTTHUMT00000194075.2";
chr21	HAVANA	transcript	35747799	35775075	.	+	.	gene_id "ENSG00000205670.6"; transcript_id "ENST00000399299.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM165B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "FAM165B-002"; level 2; havana_gene "OTTHUMG00000086193.2"; havana_transcript "OTTHUMT00000194076.1";
chr21	HAVANA	transcript	35747799	35761452	.	+	.	gene_id "ENSG00000205670.6"; transcript_id "ENST00000399292.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM165B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM165B-003"; level 2; tag "CCDS"; ccdsid "CCDS33550.1"; havana_gene "OTTHUMG00000086193.2"; havana_transcript "OTTHUMT00000194077.1";
chr21	HAVANA	transcript	35747808	35772473	.	+	.	gene_id "ENSG00000205670.6"; transcript_id "ENST00000489469.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM165B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM165B-007"; level 2; havana_gene "OTTHUMG00000086193.2"; havana_transcript "OTTHUMT00000194081.1";
chr21	HAVANA	transcript	35747860	35780164	.	+	.	gene_id "ENSG00000205670.6"; transcript_id "ENST00000495363.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM165B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM165B-006"; level 2; havana_gene "OTTHUMG00000086193.2"; havana_transcript "OTTHUMT00000194080.1";
chr21	HAVANA	transcript	35747867	35758931	.	+	.	gene_id "ENSG00000205670.6"; transcript_id "ENST00000474455.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM165B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FAM165B-005"; level 2; havana_gene "OTTHUMG00000086193.2"; havana_transcript "OTTHUMT00000194079.1";
chr21	HAVANA	transcript	35747903	35761451	.	+	.	gene_id "ENSG00000205670.6"; transcript_id "ENST00000399295.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM165B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM165B-004"; level 2; tag "CCDS"; ccdsid "CCDS33550.1"; havana_gene "OTTHUMG00000086193.2"; havana_transcript "OTTHUMT00000194078.1";
chr21	HAVANA	transcript	35772615	35773370	.	-	.	gene_id "ENSG00000222018.1"; transcript_id "ENST00000410005.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP000322.54"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000322.54-001"; level 2; havana_gene "OTTHUMG00000154291.1"; havana_transcript "OTTHUMT00000334702.1";
chr21	HAVANA	transcript	35786792	35791819	.	-	.	gene_id "ENSG00000243627.3"; transcript_id "ENST00000473249.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP000322.53"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AP000322.53-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000153030.3"; havana_transcript "OTTHUMT00000333886.1";
chr21	HAVANA	transcript	35787150	35791819	.	-	.	gene_id "ENSG00000243627.3"; transcript_id "ENST00000480922.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP000322.53"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000322.53-001"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; tag "non-submitted_evidence"; havana_gene "OTTHUMG00000153030.3"; havana_transcript "OTTHUMT00000329098.2";
chr21	HAVANA	transcript	35791013	35796264	.	-	.	gene_id "ENSG00000243627.3"; transcript_id "ENST00000450895.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP000322.53"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP000322.53-003"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000153030.3"; havana_transcript "OTTHUMT00000368900.1";
chr21	HAVANA	transcript	35818988	35831902	.	-	.	gene_id "ENSG00000180509.7"; transcript_id "ENST00000399289.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNE1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNE1-202"; level 2; tag "CCDS"; ccdsid "CCDS13636.1"; havana_gene "OTTHUMG00000086236.1"; havana_transcript "OTTHUMT00000194151.1";
chr21	HAVANA	transcript	35818989	35883613	.	-	.	gene_id "ENSG00000180509.7"; transcript_id "ENST00000337385.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNE1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNE1-005"; level 2; tag "CCDS"; ccdsid "CCDS13636.1"; havana_gene "OTTHUMG00000086236.1"; havana_transcript "OTTHUMT00000194155.1";
chr21	HAVANA	transcript	35818989	35831902	.	-	.	gene_id "ENSG00000180509.7"; transcript_id "ENST00000432085.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNE1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNE1-203"; level 2; tag "CCDS"; ccdsid "CCDS13636.1"; havana_gene "OTTHUMG00000086236.1"; havana_transcript "OTTHUMT00000194155.1";
chr21	HAVANA	transcript	35821354	35884573	.	-	.	gene_id "ENSG00000180509.7"; transcript_id "ENST00000399286.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNE1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNE1-002"; level 2; tag "CCDS"; ccdsid "CCDS13636.1"; havana_gene "OTTHUMG00000086236.1"; havana_transcript "OTTHUMT00000194152.1";
chr21	HAVANA	transcript	35821543	35828039	.	-	.	gene_id "ENSG00000180509.7"; transcript_id "ENST00000416357.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNE1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNE1-003"; level 2; tag "CCDS"; ccdsid "CCDS13636.1"; havana_gene "OTTHUMG00000086236.1"; havana_transcript "OTTHUMT00000194153.1";
chr21	HAVANA	transcript	35821543	35883541	.	-	.	gene_id "ENSG00000180509.7"; transcript_id "ENST00000399284.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNE1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNE1-201"; level 2; tag "CCDS"; ccdsid "CCDS13636.1"; havana_gene "OTTHUMG00000086236.1"; havana_transcript "OTTHUMT00000194155.1";
chr21	HAVANA	transcript	35881754	35884505	.	-	.	gene_id "ENSG00000180509.7"; transcript_id "ENST00000489175.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNE1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KCNE1-004"; level 2; havana_gene "OTTHUMG00000086236.1"; havana_transcript "OTTHUMT00000194154.1";
chr21	ENSEMBL	transcript	35828408	35828535	.	-	.	gene_id "ENSG00000221398.1"; transcript_id "ENST00000408471.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA11.5"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA11.5-201"; level 3;
chr21	HAVANA	transcript	35885440	35893881	.	-	.	gene_id "ENSG00000159200.12"; transcript_id "ENST00000487434.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RCAN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RCAN1-008"; level 2; havana_gene "OTTHUMG00000086235.2"; havana_transcript "OTTHUMT00000194149.1";
chr21	HAVANA	transcript	35888782	35932477	.	-	.	gene_id "ENSG00000159200.12"; transcript_id "ENST00000487990.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RCAN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RCAN1-202"; level 2; tag "CCDS"; ccdsid "CCDS42921.1"; havana_gene "OTTHUMG00000086235.2"; havana_transcript "OTTHUMT00000354352.1";
chr21	HAVANA	transcript	35888782	35987441	.	-	.	gene_id "ENSG00000159200.12"; transcript_id "ENST00000313806.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RCAN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RCAN1-001"; level 2; tag "CCDS"; ccdsid "CCDS13637.1"; havana_gene "OTTHUMG00000086235.2"; havana_transcript "OTTHUMT00000194142.1";
chr21	HAVANA	transcript	35888782	35986745	.	-	.	gene_id "ENSG00000159200.12"; transcript_id "ENST00000489903.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RCAN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RCAN1-002"; level 2; havana_gene "OTTHUMG00000086235.2"; havana_transcript "OTTHUMT00000194143.1";
chr21	HAVANA	transcript	35888782	35899261	.	-	.	gene_id "ENSG00000159200.12"; transcript_id "ENST00000381132.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RCAN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RCAN1-003"; level 2; tag "CCDS"; ccdsid "CCDS33551.1"; havana_gene "OTTHUMG00000086235.2"; havana_transcript "OTTHUMT00000194144.1";
chr21	HAVANA	transcript	35888782	35986142	.	-	.	gene_id "ENSG00000159200.12"; transcript_id "ENST00000399272.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RCAN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RCAN1-004"; level 2; havana_gene "OTTHUMG00000086235.2"; havana_transcript "OTTHUMT00000194145.1";
chr21	HAVANA	transcript	35888782	35899148	.	-	.	gene_id "ENSG00000159200.12"; transcript_id "ENST00000481448.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RCAN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RCAN1-005"; level 2; havana_gene "OTTHUMG00000086235.2"; havana_transcript "OTTHUMT00000194146.2";
chr21	HAVANA	transcript	35888782	35896587	.	-	.	gene_id "ENSG00000159200.12"; transcript_id "ENST00000482533.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RCAN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RCAN1-006"; level 2; tag "CCDS"; ccdsid "CCDS42921.1"; havana_gene "OTTHUMG00000086235.2"; havana_transcript "OTTHUMT00000194147.2";
chr21	ENSEMBL	transcript	35888786	35897686	.	-	.	gene_id "ENSG00000159200.12"; transcript_id "ENST00000381135.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RCAN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RCAN1-201"; level 3; havana_gene "OTTHUMG00000086235.2";
chr21	HAVANA	transcript	35888788	35986745	.	-	.	gene_id "ENSG00000159200.12"; transcript_id "ENST00000443408.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RCAN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RCAN1-010"; level 2; tag "CCDS"; ccdsid "CCDS42921.1"; havana_gene "OTTHUMG00000086235.2"; havana_transcript "OTTHUMT00000354352.1";
chr21	HAVANA	transcript	35893358	35899122	.	-	.	gene_id "ENSG00000159200.12"; transcript_id "ENST00000492600.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RCAN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RCAN1-007"; level 2; havana_gene "OTTHUMG00000086235.2"; havana_transcript "OTTHUMT00000194148.2";
chr21	HAVANA	transcript	35895844	35987382	.	-	.	gene_id "ENSG00000159200.12"; transcript_id "ENST00000463276.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RCAN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RCAN1-009"; level 2; havana_gene "OTTHUMG00000086235.2"; havana_transcript "OTTHUMT00000194150.1";
chr21	HAVANA	transcript	36041688	36090525	.	+	.	gene_id "ENSG00000159212.8"; transcript_id "ENST00000360731.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLIC6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLIC6-001"; level 2; havana_gene "OTTHUMG00000086237.1"; havana_transcript "OTTHUMT00000194156.1";
chr21	HAVANA	transcript	36041688	36090525	.	+	.	gene_id "ENSG00000159212.8"; transcript_id "ENST00000349499.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLIC6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLIC6-002"; level 2; tag "CCDS"; ccdsid "CCDS13638.1"; havana_gene "OTTHUMG00000086237.1"; havana_transcript "OTTHUMT00000194157.1";
chr21	HAVANA	transcript	36096105	36109478	.	-	.	gene_id "ENSG00000230978.1"; transcript_id "ENST00000430635.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00160"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00160-001"; level 2; havana_gene "OTTHUMG00000086234.1"; havana_transcript "OTTHUMT00000194141.1";
chr21	HAVANA	transcript	36118054	36157183	.	+	.	gene_id "ENSG00000234380.1"; transcript_id "ENST00000420877.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000330.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000330.8-001"; level 2; havana_gene "OTTHUMG00000086233.1"; havana_transcript "OTTHUMT00000194139.1";
chr21	HAVANA	transcript	36118134	36120664	.	+	.	gene_id "ENSG00000234380.1"; transcript_id "ENST00000419921.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000330.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000330.8-002"; level 2; havana_gene "OTTHUMG00000086233.1"; havana_transcript "OTTHUMT00000194140.1";
chr21	HAVANA	transcript	36160098	36260987	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000344691.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RUNX1-001"; level 2; tag "CCDS"; ccdsid "CCDS42922.1"; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194230.1";
chr21	HAVANA	transcript	36160098	36421641	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000300305.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RUNX1-002"; level 2; tag "CCDS"; ccdsid "CCDS13639.1"; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194231.1";
chr21	ENSEMBL	transcript	36160098	36421595	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000437180.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RUNX1-204"; level 3; tag "CCDS"; ccdsid "CCDS13639.1"; havana_gene "OTTHUMG00000086299.4";
chr21	ENSEMBL	transcript	36160098	36262034	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000325074.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RUNX1-201"; level 3; havana_gene "OTTHUMG00000086299.4";
chr21	HAVANA	transcript	36164052	36421585	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000482318.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RUNX1-003"; level 2; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194232.1";
chr21	HAVANA	transcript	36164083	36259480	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000399240.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RUNX1-009"; level 2; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194238.1";
chr21	ENSEMBL	transcript	36164118	36421462	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000431176.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RUNX1-203"; level 3; havana_gene "OTTHUMG00000086299.4";
chr21	ENSEMBL	transcript	36164276	36421595	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000399245.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RUNX1-202"; level 3; havana_gene "OTTHUMG00000086299.4";
chr21	HAVANA	transcript	36193576	36202267	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000479325.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RUNX1-006"; level 2; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194235.1";
chr21	HAVANA	transcript	36193576	36260987	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000358356.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RUNX1-005"; level 2; tag "CCDS"; ccdsid "CCDS46646.1"; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194234.2";
chr21	HAVANA	transcript	36205258	36228744	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000469087.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RUNX1-007"; level 2; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194236.1";
chr21	HAVANA	transcript	36206707	36262087	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000399237.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RUNX1-012"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194241.4";
chr21	HAVANA	transcript	36228586	36231875	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000467577.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RUNX1-008"; level 2; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194237.1";
chr21	ENSEMBL	transcript	36228710	36421462	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000486278.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RUNX1-205"; level 3; havana_gene "OTTHUMG00000086299.4";
chr21	HAVANA	transcript	36252903	36421595	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000455571.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RUNX1-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194239.1";
chr21	HAVANA	transcript	36259343	37357008	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000475045.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RUNX1-013"; level 2; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194245.2";
chr21	HAVANA	transcript	36265222	36421567	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000416754.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RUNX1-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194233.4";
chr21	HAVANA	transcript	36437013	36437369	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000468726.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RUNX1-014"; level 2; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194407.1";
chr21	HAVANA	transcript	36744805	36953058	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000467692.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RUNX1-016"; level 2; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194409.1";
chr21	HAVANA	transcript	36807959	36837627	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000494829.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RUNX1-015"; level 2; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194408.1";
chr21	HAVANA	transcript	37326958	37357047	.	-	.	gene_id "ENSG00000159216.12"; transcript_id "ENST00000460207.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RUNX1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RUNX1-017"; level 2; havana_gene "OTTHUMG00000086299.4"; havana_transcript "OTTHUMT00000194410.1";
chr21	HAVANA	transcript	36508935	36511519	.	+	.	gene_id "ENSG00000234703.1"; transcript_id "ENST00000455028.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF015262.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF015262.2-001"; level 2; havana_gene "OTTHUMG00000086303.1"; havana_transcript "OTTHUMT00000194246.1";
chr21	HAVANA	transcript	36844395	36844730	.	-	.	gene_id "ENSG00000223671.1"; transcript_id "ENST00000421454.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPL34P3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPL34P3-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086465.1"; havana_transcript "OTTHUMT00000194415.1";
chr21	HAVANA	transcript	36972030	36972320	.	-	.	gene_id "ENSG00000231300.1"; transcript_id "ENST00000431167.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AF015726.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AF015726.1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086464.1"; havana_transcript "OTTHUMT00000194414.1";
chr21	HAVANA	transcript	37085437	37105240	.	-	.	gene_id "ENSG00000230794.1"; transcript_id "ENST00000412240.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF015720.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF015720.3-001"; level 2; havana_gene "OTTHUMG00000086462.1"; havana_transcript "OTTHUMT00000194412.1";
chr21	ENSEMBL	transcript	37093013	37093106	.	+	.	gene_id "ENSG00000211590.1"; transcript_id "ENST00000390235.1"; gene_type "miRNA"; gene_status "KNOWN"; gene_name "MIR802"; transcript_type "miRNA"; transcript_status "KNOWN"; transcript_name "MIR802-201"; level 3;
chr21	HAVANA	transcript	37097045	37097398	.	-	.	gene_id "ENSG00000229761.1"; transcript_id "ENST00000434853.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPS20P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPS20P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086461.1"; havana_transcript "OTTHUMT00000194411.1";
chr21	HAVANA	transcript	37259493	37260105	.	+	.	gene_id "ENSG00000234008.3"; transcript_id "ENST00000440405.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PPP1R2P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "PPP1R2P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086466.1"; havana_transcript "OTTHUMT00000194416.1";
chr21	ENSEMBL	transcript	37263094	37263155	.	+	.	gene_id "ENSG00000244123.1"; transcript_id "ENST00000470505.1"; gene_type "Mt_tRNA_pseudogene"; gene_status "NOVEL"; gene_name "AF020802.4"; transcript_type "Mt_tRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AF020802.4-201"; level 3;
chr21	ENSEMBL	transcript	37263159	37263224	.	+	.	gene_id "ENSG00000243001.1"; transcript_id "ENST00000467382.1"; gene_type "Mt_tRNA_pseudogene"; gene_status "NOVEL"; gene_name "AF020802.2"; transcript_type "Mt_tRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AF020802.2-201"; level 3;
chr21	ENSEMBL	transcript	37263329	37263398	.	+	.	gene_id "ENSG00000239259.1"; transcript_id "ENST00000466733.1"; gene_type "Mt_tRNA_pseudogene"; gene_status "NOVEL"; gene_name "AF020802.1"; transcript_type "Mt_tRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AF020802.1-201"; level 3;
chr21	ENSEMBL	transcript	37263405	37263470	.	-	.	gene_id "ENSG00000243611.1"; transcript_id "ENST00000474296.1"; gene_type "Mt_tRNA_pseudogene"; gene_status "NOVEL"; gene_name "AF020802.3"; transcript_type "Mt_tRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AF020802.3-201"; level 3;
chr21	HAVANA	transcript	37377636	37379899	.	+	.	gene_id "ENSG00000231106.1"; transcript_id "ENST00000457157.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000688.8"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000688.8-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086463.1"; havana_transcript "OTTHUMT00000194413.1";
chr21	HAVANA	transcript	37388377	37388844	.	-	.	gene_id "ENSG00000214914.3"; transcript_id "ENST00000453844.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPL23AP3"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPL23AP3-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086467.1"; havana_transcript "OTTHUMT00000194417.1";
chr21	HAVANA	transcript	37406839	37432559	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000399215.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SETD4-005"; level 2; tag "CCDS"; ccdsid "CCDS13640.1"; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194456.1";
chr21	HAVANA	transcript	37406839	37432683	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000481477.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SETD4-002"; level 2; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194453.1";
chr21	HAVANA	transcript	37406839	37432824	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000399212.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SETD4-003"; level 2; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194454.1";
chr21	HAVANA	transcript	37406839	37432848	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000332131.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SETD4-001"; level 2; tag "CCDS"; ccdsid "CCDS13640.1"; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194452.1";
chr21	HAVANA	transcript	37406840	37415671	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000487297.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SETD4-008"; level 2; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194459.1";
chr21	HAVANA	transcript	37408383	37415946	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000469482.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SETD4-016"; level 2; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194467.1";
chr21	HAVANA	transcript	37415984	37432611	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000399205.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SETD4-004"; level 2; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194455.1";
chr21	HAVANA	transcript	37415984	37432662	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000399208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SETD4-006"; level 2; tag "CCDS"; ccdsid "CCDS42923.1"; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194457.1";
chr21	HAVANA	transcript	37415984	37451687	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000399201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SETD4-007"; level 2; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194458.1";
chr21	HAVANA	transcript	37415996	37432543	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000399207.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SETD4-011"; level 2; tag "CCDS"; ccdsid "CCDS42923.1"; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194462.1";
chr21	HAVANA	transcript	37417912	37432661	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000424303.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SETD4-013"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194464.1";
chr21	HAVANA	transcript	37417929	37432611	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000429161.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SETD4-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194461.1";
chr21	HAVANA	transcript	37418081	37429599	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000485865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SETD4-017"; level 2; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000318439.1";
chr21	HAVANA	transcript	37418162	37432824	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000446166.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SETD4-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194460.1";
chr21	HAVANA	transcript	37420620	37432598	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000442559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SETD4-014"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194465.1";
chr21	HAVANA	transcript	37425215	37429497	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000460704.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SETD4-015"; level 2; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194466.1";
chr21	HAVANA	transcript	37425887	37432540	.	-	.	gene_id "ENSG00000185917.9"; transcript_id "ENST00000443703.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SETD4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SETD4-012"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086483.2"; havana_transcript "OTTHUMT00000194463.1";
chr21	HAVANA	transcript	37422512	37423675	.	+	.	gene_id "ENSG00000189089.4"; transcript_id "ENST00000408914.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RIMKLBP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RIMKLBP1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086605.1"; havana_transcript "OTTHUMT00000194615.1";
chr21	ENSEMBL	transcript	37422527	37423582	.	+	.	gene_id "ENSG00000189089.4"; transcript_id "ENST00000341022.3"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RIMKLBP1"; transcript_type "retrotransposed"; transcript_status "KNOWN"; transcript_name "RIMKLBP1-201"; level 1; havana_gene "OTTHUMG00000086605.1";
chr21	ENSEMBL	transcript	37426162	37481988	.	-	.	gene_id "ENSG00000251481.1"; transcript_id "ENST00000503619.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000688.1"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AP000688.1-201"; level 3;
chr21	HAVANA	transcript	37432730	37436706	.	+	.	gene_id "ENSG00000236677.1"; transcript_id "ENST00000436303.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000688.11"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000688.11-001"; level 2; havana_gene "OTTHUMG00000086615.1"; havana_transcript "OTTHUMT00000194630.1";
chr21	ENSEMBL	transcript	37438843	37438950	.	+	.	gene_id "ENSG00000200213.1"; transcript_id "ENST00000363343.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.111"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.111-201"; level 3;
chr21	ENSEMBL	transcript	37441940	37498938	.	-	.	gene_id "ENSG00000230212.2"; transcript_id "ENST00000535199.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000688.14"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000688.14-201"; level 3; havana_gene "OTTHUMG00000086616.1";
chr21	HAVANA	transcript	37447179	37447900	.	-	.	gene_id "ENSG00000230212.2"; transcript_id "ENST00000415147.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000688.14"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000688.14-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086616.1"; havana_transcript "OTTHUMT00000194631.1";
chr21	HAVANA	transcript	37442239	37443514	.	+	.	gene_id "ENSG00000159228.8"; transcript_id "ENST00000466328.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBR1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CBR1-005"; level 2; havana_gene "OTTHUMG00000086618.2"; havana_transcript "OTTHUMT00000383516.1";
chr21	HAVANA	transcript	37442239	37445464	.	+	.	gene_id "ENSG00000159228.8"; transcript_id "ENST00000530908.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CBR1-004"; level 2; havana_gene "OTTHUMG00000086618.2"; havana_transcript "OTTHUMT00000383517.1";
chr21	HAVANA	transcript	37442239	37445464	.	+	.	gene_id "ENSG00000159228.8"; transcript_id "ENST00000290349.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBR1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CBR1-001"; level 2; tag "CCDS"; ccdsid "CCDS13641.1"; havana_gene "OTTHUMG00000086618.2"; havana_transcript "OTTHUMT00000194633.2";
chr21	HAVANA	transcript	37442313	37443881	.	+	.	gene_id "ENSG00000159228.8"; transcript_id "ENST00000439427.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CBR1-003"; level 2; havana_gene "OTTHUMG00000086618.2"; havana_transcript "OTTHUMT00000194635.2";
chr21	HAVANA	transcript	37442333	37444831	.	+	.	gene_id "ENSG00000159228.8"; transcript_id "ENST00000399191.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBR1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CBR1-002"; level 2; havana_gene "OTTHUMG00000086618.2"; havana_transcript "OTTHUMT00000194634.1";
chr21	HAVANA	transcript	37455157	37462712	.	+	.	gene_id "ENSG00000236119.1"; transcript_id "ENST00000445464.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000688.15"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000688.15-001"; level 2; havana_gene "OTTHUMG00000086614.1"; havana_transcript "OTTHUMT00000194629.1";
chr21	HAVANA	transcript	37477179	37481988	.	+	.	gene_id "ENSG00000233393.1"; transcript_id "ENST00000422473.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000688.29"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000688.29-001"; level 2; havana_gene "OTTHUMG00000153500.1"; havana_transcript "OTTHUMT00000331385.1";
chr21	ENSEMBL	transcript	37502669	37504208	.	+	.	gene_id "ENSG00000226054.1"; transcript_id "ENST00000412073.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MEMO1P1"; transcript_type "retrotransposed"; transcript_status "KNOWN"; transcript_name "MEMO1P1-201"; level 3; havana_gene "OTTHUMG00000086608.1";
chr21	HAVANA	transcript	37502787	37503674	.	+	.	gene_id "ENSG00000226054.1"; transcript_id "ENST00000452572.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MEMO1P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "MEMO1P1-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000086608.1"; havana_transcript "OTTHUMT00000194623.1";
chr21	ENSEMBL	transcript	37502670	37648524	.	-	.	gene_id "ENSG00000255739.1"; transcript_id "ENST00000392371.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000689.1"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AP000689.1-201"; level 3;
chr21	HAVANA	transcript	37504065	37528605	.	-	.	gene_id "ENSG00000236830.1"; transcript_id "ENST00000453159.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000689.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000689.8-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086607.1"; havana_transcript "OTTHUMT00000194619.1";
chr21	HAVANA	transcript	37504084	37528593	.	-	.	gene_id "ENSG00000236830.1"; transcript_id "ENST00000413862.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000689.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000689.8-002"; level 2; havana_gene "OTTHUMG00000086607.1"; havana_transcript "OTTHUMT00000194620.1";
chr21	HAVANA	transcript	37513694	37528604	.	-	.	gene_id "ENSG00000236830.1"; transcript_id "ENST00000427491.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000689.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000689.8-003"; level 2; havana_gene "OTTHUMG00000086607.1"; havana_transcript "OTTHUMT00000194621.1";
chr21	HAVANA	transcript	37513705	37523008	.	-	.	gene_id "ENSG00000236830.1"; transcript_id "ENST00000432988.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000689.8"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AP000689.8-004"; level 2; havana_gene "OTTHUMG00000086607.1"; havana_transcript "OTTHUMT00000194622.1";
chr21	HAVANA	transcript	37504748	37505330	.	+	.	gene_id "ENSG00000214889.3"; transcript_id "ENST00000419943.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPS9P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPS9P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086609.1"; havana_transcript "OTTHUMT00000194624.1";
chr21	HAVANA	transcript	37507210	37518864	.	+	.	gene_id "ENSG00000159231.5"; transcript_id "ENST00000290354.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CBR3-001"; level 2; tag "CCDS"; ccdsid "CCDS13642.1"; havana_gene "OTTHUMG00000086617.1"; havana_transcript "OTTHUMT00000194632.1";
chr21	HAVANA	transcript	37529080	37572743	.	+	.	gene_id "ENSG00000142197.7"; transcript_id "ENST00000270190.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DOPEY2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DOPEY2-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086619.3"; havana_transcript "OTTHUMT00000194638.1";
chr21	HAVANA	transcript	37536833	37666572	.	+	.	gene_id "ENSG00000142197.7"; transcript_id "ENST00000399151.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DOPEY2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DOPEY2-001"; level 2; tag "CCDS"; ccdsid "CCDS13643.1"; havana_gene "OTTHUMG00000086619.3"; havana_transcript "OTTHUMT00000194636.1";
chr21	HAVANA	transcript	37537134	37584346	.	+	.	gene_id "ENSG00000142197.7"; transcript_id "ENST00000492760.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DOPEY2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DOPEY2-004"; level 2; havana_gene "OTTHUMG00000086619.3"; havana_transcript "OTTHUMT00000194639.1";
chr21	HAVANA	transcript	37618599	37634213	.	+	.	gene_id "ENSG00000142197.7"; transcript_id "ENST00000463668.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DOPEY2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DOPEY2-002"; level 2; havana_gene "OTTHUMG00000086619.3"; havana_transcript "OTTHUMT00000194637.1";
chr21	HAVANA	transcript	37665727	37711095	.	+	.	gene_id "ENSG00000142197.7"; transcript_id "ENST00000435949.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DOPEY2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DOPEY2-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086619.3"; havana_transcript "OTTHUMT00000334592.1";
chr21	HAVANA	transcript	37665727	37711195	.	+	.	gene_id "ENSG00000142197.7"; transcript_id "ENST00000418642.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DOPEY2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DOPEY2-008"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086619.3"; havana_transcript "OTTHUMT00000334593.1";
chr21	HAVANA	transcript	37665727	37710150	.	+	.	gene_id "ENSG00000142197.7"; transcript_id "ENST00000414001.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DOPEY2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DOPEY2-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086619.3"; havana_transcript "OTTHUMT00000334445.1";
chr21	HAVANA	transcript	37665727	37710150	.	+	.	gene_id "ENSG00000142197.7"; transcript_id "ENST00000445834.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DOPEY2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DOPEY2-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086619.3"; havana_transcript "OTTHUMT00000334446.1";
chr21	HAVANA	transcript	37541268	37542478	.	-	.	gene_id "ENSG00000228149.1"; transcript_id "ENST00000437106.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPL3P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPL3P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086610.1"; havana_transcript "OTTHUMT00000194625.1";
chr21	ENSEMBL	transcript	37630724	37630829	.	-	.	gene_id "ENSG00000238851.1"; transcript_id "ENST00000459290.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13.271"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.271-201"; level 3;
chr21	HAVANA	transcript	37667471	37668000	.	-	.	gene_id "ENSG00000214867.3"; transcript_id "ENST00000399149.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SRSF9P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "SRSF9P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086621.1"; havana_transcript "OTTHUMT00000194646.1";
chr21	HAVANA	transcript	37692487	37711825	.	+	.	gene_id "ENSG00000159256.7"; transcript_id "ENST00000492336.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MORC3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MORC3-003"; level 2; havana_gene "OTTHUMG00000086620.4"; havana_transcript "OTTHUMT00000194642.2";
chr21	HAVANA	transcript	37692487	37748944	.	+	.	gene_id "ENSG00000159256.7"; transcript_id "ENST00000400485.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MORC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MORC3-001"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS42924.1"; havana_gene "OTTHUMG00000086620.4"; havana_transcript "OTTHUMT00000194640.1";
chr21	HAVANA	transcript	37692529	37748944	.	+	.	gene_id "ENSG00000159256.7"; transcript_id "ENST00000487909.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MORC3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MORC3-002"; level 2; havana_gene "OTTHUMG00000086620.4"; havana_transcript "OTTHUMT00000194641.3";
chr21	HAVANA	transcript	37705717	37709288	.	+	.	gene_id "ENSG00000159256.7"; transcript_id "ENST00000485933.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MORC3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MORC3-006"; level 2; havana_gene "OTTHUMG00000086620.4"; havana_transcript "OTTHUMT00000194645.1";
chr21	HAVANA	transcript	37720170	37732347	.	+	.	gene_id "ENSG00000159256.7"; transcript_id "ENST00000485299.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MORC3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MORC3-004"; level 2; havana_gene "OTTHUMG00000086620.4"; havana_transcript "OTTHUMT00000194643.1";
chr21	HAVANA	transcript	37734134	37741413	.	+	.	gene_id "ENSG00000159256.7"; transcript_id "ENST00000484028.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MORC3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MORC3-005"; level 2; havana_gene "OTTHUMG00000086620.4"; havana_transcript "OTTHUMT00000194644.1";
chr21	HAVANA	transcript	37732928	37734338	.	+	.	gene_id "ENSG00000228107.1"; transcript_id "ENST00000397184.2"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000692.9"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000692.9-001"; level 2; havana_gene "OTTHUMG00000086612.1"; havana_transcript "OTTHUMT00000194627.1";
chr21	HAVANA	transcript	37757676	37789125	.	+	.	gene_id "ENSG00000159259.4"; transcript_id "ENST00000314103.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHAF1B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CHAF1B-001"; level 2; tag "CCDS"; ccdsid "CCDS13644.1"; havana_gene "OTTHUMG00000086606.2"; havana_transcript "OTTHUMT00000194616.1";
chr21	HAVANA	transcript	37758358	37770537	.	+	.	gene_id "ENSG00000159259.4"; transcript_id "ENST00000480486.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHAF1B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CHAF1B-003"; level 2; havana_gene "OTTHUMG00000086606.2"; havana_transcript "OTTHUMT00000194618.1";
chr21	HAVANA	transcript	37771800	37785260	.	+	.	gene_id "ENSG00000159259.4"; transcript_id "ENST00000481458.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CHAF1B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CHAF1B-002"; level 2; havana_gene "OTTHUMG00000086606.2"; havana_transcript "OTTHUMT00000194617.1";
chr21	HAVANA	transcript	37761176	37761410	.	-	.	gene_id "ENSG00000224421.1"; transcript_id "ENST00000444161.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ATP5J2LP"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "ATP5J2LP-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086613.1"; havana_transcript "OTTHUMT00000194628.1";
chr21	HAVANA	transcript	37802658	37853368	.	+	.	gene_id "ENSG00000230479.1"; transcript_id "ENST00000429588.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000695.6"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000695.6-001"; level 2; havana_gene "OTTHUMG00000086643.1"; havana_transcript "OTTHUMT00000194709.1";
chr21	HAVANA	transcript	37818029	37904706	.	+	.	gene_id "ENSG00000233818.1"; transcript_id "ENST00000428667.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000695.4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000695.4-002"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086611.2"; havana_transcript "OTTHUMT00000194679.1";
chr21	HAVANA	transcript	37818120	37833050	.	+	.	gene_id "ENSG00000233818.1"; transcript_id "ENST00000454980.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000695.4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000695.4-001"; level 2; havana_gene "OTTHUMG00000086611.2"; havana_transcript "OTTHUMT00000194626.1";
chr21	HAVANA	transcript	37832919	37838739	.	-	.	gene_id "ENSG00000159261.6"; transcript_id "ENST00000399139.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN14-006"; level 2; tag "CCDS"; ccdsid "CCDS13645.1"; havana_gene "OTTHUMG00000086638.1"; havana_transcript "OTTHUMT00000194702.1";
chr21	HAVANA	transcript	37832919	37852388	.	-	.	gene_id "ENSG00000159261.6"; transcript_id "ENST00000399137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN14-001"; level 2; tag "CCDS"; ccdsid "CCDS13645.1"; havana_gene "OTTHUMG00000086638.1"; havana_transcript "OTTHUMT00000194697.1";
chr21	HAVANA	transcript	37832919	37852388	.	-	.	gene_id "ENSG00000159261.6"; transcript_id "ENST00000399135.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN14-002"; level 2; tag "CCDS"; ccdsid "CCDS13645.1"; havana_gene "OTTHUMG00000086638.1"; havana_transcript "OTTHUMT00000194698.1";
chr21	HAVANA	transcript	37832919	37914898	.	-	.	gene_id "ENSG00000159261.6"; transcript_id "ENST00000399136.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN14-003"; level 2; tag "CCDS"; ccdsid "CCDS13645.1"; havana_gene "OTTHUMG00000086638.1"; havana_transcript "OTTHUMT00000194699.1";
chr21	HAVANA	transcript	37832919	37948867	.	-	.	gene_id "ENSG00000159261.6"; transcript_id "ENST00000342108.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN14"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CLDN14-004"; level 2; tag "CCDS"; ccdsid "CCDS13645.1"; havana_gene "OTTHUMG00000086638.1"; havana_transcript "OTTHUMT00000194700.1";
chr21	HAVANA	transcript	37898578	37915153	.	-	.	gene_id "ENSG00000159261.6"; transcript_id "ENST00000478313.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CLDN14"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CLDN14-005"; level 2; havana_gene "OTTHUMG00000086638.1"; havana_transcript "OTTHUMT00000194701.1";
chr21	HAVANA	transcript	37858281	37859709	.	-	.	gene_id "ENSG00000223741.1"; transcript_id "ENST00000433951.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PSMD4P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "PSMD4P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086641.1"; havana_transcript "OTTHUMT00000194707.1";
chr21	HAVANA	transcript	38004979	38009331	.	-	.	gene_id "ENSG00000231324.1"; transcript_id "ENST00000457669.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000696.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000696.2-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086644.1"; havana_transcript "OTTHUMT00000194710.1";
chr21	HAVANA	transcript	38071073	38073864	.	-	.	gene_id "ENSG00000224269.1"; transcript_id "ENST00000430607.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000697.6"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000697.6-001"; level 2; havana_gene "OTTHUMG00000086642.1"; havana_transcript "OTTHUMT00000194708.1";
chr21	HAVANA	transcript	38071433	38082913	.	+	.	gene_id "ENSG00000159263.9"; transcript_id "ENST00000460783.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SIM2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SIM2-003"; level 2; havana_gene "OTTHUMG00000086637.2"; havana_transcript "OTTHUMT00000194694.1";
chr21	HAVANA	transcript	38071434	38118625	.	+	.	gene_id "ENSG00000159263.9"; transcript_id "ENST00000481185.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SIM2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SIM2-002"; level 2; havana_gene "OTTHUMG00000086637.2"; havana_transcript "OTTHUMT00000194693.1";
chr21	HAVANA	transcript	38071434	38122218	.	+	.	gene_id "ENSG00000159263.9"; transcript_id "ENST00000290399.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SIM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SIM2-001"; level 2; tag "CCDS"; ccdsid "CCDS13646.1"; havana_gene "OTTHUMG00000086637.2"; havana_transcript "OTTHUMT00000194692.1";
chr21	ENSEMBL	transcript	38071991	38118219	.	+	.	gene_id "ENSG00000159263.9"; transcript_id "ENST00000430056.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SIM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SIM2-201"; level 3; tag "CCDS"; ccdsid "CCDS46647.1"; havana_gene "OTTHUMG00000086637.2";
chr21	HAVANA	transcript	38081481	38118172	.	+	.	gene_id "ENSG00000159263.9"; transcript_id "ENST00000431229.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SIM2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SIM2-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086637.2"; havana_transcript "OTTHUMT00000194695.1";
chr21	HAVANA	transcript	38084866	38092662	.	+	.	gene_id "ENSG00000159263.9"; transcript_id "ENST00000483178.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SIM2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SIM2-005"; level 2; havana_gene "OTTHUMG00000086637.2"; havana_transcript "OTTHUMT00000194696.1";
chr21	HAVANA	transcript	38117073	38131815	.	+	.	gene_id "ENSG00000159263.9"; transcript_id "ENST00000481730.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SIM2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SIM2-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086637.2"; havana_transcript "OTTHUMT00000329640.1";
chr21	HAVANA	transcript	38123493	38338773	.	-	.	gene_id "ENSG00000159267.9"; transcript_id "ENST00000399120.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HLCS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HLCS-002"; level 2; tag "CCDS"; ccdsid "CCDS13647.1"; havana_gene "OTTHUMG00000086636.1"; havana_transcript "OTTHUMT00000194687.1";
chr21	HAVANA	transcript	38123493	38362536	.	-	.	gene_id "ENSG00000159267.9"; transcript_id "ENST00000336648.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HLCS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HLCS-001"; level 2; tag "CCDS"; ccdsid "CCDS13647.1"; havana_gene "OTTHUMG00000086636.1"; havana_transcript "OTTHUMT00000194686.1";
chr21	HAVANA	transcript	38268870	38302717	.	-	.	gene_id "ENSG00000159267.9"; transcript_id "ENST00000482273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HLCS"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "HLCS-006"; level 2; havana_gene "OTTHUMG00000086636.1"; havana_transcript "OTTHUMT00000194691.1";
chr21	HAVANA	transcript	38309468	38352928	.	-	.	gene_id "ENSG00000159267.9"; transcript_id "ENST00000448340.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HLCS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HLCS-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086636.1"; havana_transcript "OTTHUMT00000194688.1";
chr21	HAVANA	transcript	38309485	38338939	.	-	.	gene_id "ENSG00000159267.9"; transcript_id "ENST00000419461.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HLCS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HLCS-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086636.1"; havana_transcript "OTTHUMT00000194690.1";
chr21	HAVANA	transcript	38309514	38362524	.	-	.	gene_id "ENSG00000159267.9"; transcript_id "ENST00000427746.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HLCS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HLCS-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086636.1"; havana_transcript "OTTHUMT00000194689.1";
chr21	HAVANA	transcript	38176285	38178585	.	-	.	gene_id "ENSG00000237646.1"; transcript_id "ENST00000434195.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000699.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000699.2-001"; level 2; havana_gene "OTTHUMG00000086640.1"; havana_transcript "OTTHUMT00000194706.1";
chr21	ENSEMBL	transcript	38224211	38224328	.	+	.	gene_id "ENSG00000199806.1"; transcript_id "ENST00000362936.1"; gene_type "rRNA"; gene_status "NOVEL"; gene_name "5S_rRNA.41"; transcript_type "rRNA"; transcript_status "NOVEL"; transcript_name "5S_rRNA.41-201"; level 3;
chr21	HAVANA	transcript	38338812	38344128	.	+	.	gene_id "ENSG00000224790.1"; transcript_id "ENST00000430068.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP000704.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP000704.5-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086635.2"; havana_transcript "OTTHUMT00000194685.2";
chr21	ENSEMBL	transcript	38359039	38359151	.	-	.	gene_id "ENSG00000207416.1"; transcript_id "ENST00000384685.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Y_RNA.635"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Y_RNA.635-201"; level 3;
chr21	HAVANA	transcript	38366943	38367375	.	+	.	gene_id "ENSG00000215734.3"; transcript_id "ENST00000400819.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MRPL20P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "MRPL20P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086645.1"; havana_transcript "OTTHUMT00000194711.1";
chr21	HAVANA	transcript	38378450	38391959	.	+	.	gene_id "ENSG00000183145.4"; transcript_id "ENST00000485272.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR6-003"; level 2; havana_gene "OTTHUMG00000086639.1"; havana_transcript "OTTHUMT00000194705.1";
chr21	HAVANA	transcript	38378502	38391959	.	+	.	gene_id "ENSG00000183145.4"; transcript_id "ENST00000490393.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR6-002"; level 2; havana_gene "OTTHUMG00000086639.1"; havana_transcript "OTTHUMT00000194704.1";
chr21	HAVANA	transcript	38378863	38391959	.	+	.	gene_id "ENSG00000183145.4"; transcript_id "ENST00000329553.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DSCR6-001"; level 2; tag "CCDS"; ccdsid "CCDS13648.1"; havana_gene "OTTHUMG00000086639.1"; havana_transcript "OTTHUMT00000194703.1";
chr21	ENSEMBL	transcript	38417830	38417936	.	+	.	gene_id "ENSG00000212136.1"; transcript_id "ENST00000390834.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.734"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.734-201"; level 3;
chr21	HAVANA	transcript	38435146	38445111	.	-	.	gene_id "ENSG00000185808.8"; transcript_id "ENST00000464265.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PIGP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PIGP-004"; level 2; tag "CCDS"; ccdsid "CCDS13649.1"; havana_gene "OTTHUMG00000086653.5"; havana_transcript "OTTHUMT00000194769.2";
chr21	HAVANA	transcript	38436448	38445458	.	-	.	gene_id "ENSG00000185808.8"; transcript_id "ENST00000360525.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PIGP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PIGP-001"; level 2; tag "CCDS"; ccdsid "CCDS13650.1"; havana_gene "OTTHUMG00000086653.5"; havana_transcript "OTTHUMT00000194766.1";
chr21	HAVANA	transcript	38437674	38444837	.	-	.	gene_id "ENSG00000185808.8"; transcript_id "ENST00000329667.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PIGP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PIGP-008"; level 2; havana_gene "OTTHUMG00000086653.5"; havana_transcript "OTTHUMT00000194773.1";
chr21	HAVANA	transcript	38437674	38445200	.	-	.	gene_id "ENSG00000185808.8"; transcript_id "ENST00000399102.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PIGP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PIGP-002"; level 2; tag "CCDS"; ccdsid "CCDS13650.1"; havana_gene "OTTHUMG00000086653.5"; havana_transcript "OTTHUMT00000194767.1";
chr21	HAVANA	transcript	38437674	38445311	.	-	.	gene_id "ENSG00000185808.8"; transcript_id "ENST00000399103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PIGP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PIGP-005"; level 2; tag "CCDS"; ccdsid "CCDS13650.1"; havana_gene "OTTHUMG00000086653.5"; havana_transcript "OTTHUMT00000194770.1";
chr21	HAVANA	transcript	38437674	38445470	.	-	.	gene_id "ENSG00000185808.8"; transcript_id "ENST00000399098.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PIGP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PIGP-003"; level 2; havana_gene "OTTHUMG00000086653.5"; havana_transcript "OTTHUMT00000194768.1";
chr21	HAVANA	transcript	38441567	38445023	.	-	.	gene_id "ENSG00000185808.8"; transcript_id "ENST00000479152.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PIGP"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PIGP-006"; level 2; havana_gene "OTTHUMG00000086653.5"; havana_transcript "OTTHUMT00000194771.1";
chr21	HAVANA	transcript	38441852	38445297	.	-	.	gene_id "ENSG00000185808.8"; transcript_id "ENST00000430792.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PIGP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PIGP-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086653.5"; havana_transcript "OTTHUMT00000194772.5";
chr21	HAVANA	transcript	38445526	38507711	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000492275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TTC3-011"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194784.1";
chr21	HAVANA	transcript	38445551	38538053	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000418766.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TTC3-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194781.1";
chr21	HAVANA	transcript	38445558	38538067	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000485402.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TTC3-022"; level 2; tag "not_organism-supported"; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194795.1";
chr21	HAVANA	transcript	38445567	38524258	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000450533.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TTC3-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194778.1";
chr21	HAVANA	transcript	38445567	38538067	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000438055.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TTC3-023"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "not_organism-supported"; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194796.1";
chr21	HAVANA	transcript	38445571	38575404	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000355666.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TTC3-003"; level 2; tag "CCDS"; ccdsid "CCDS13651.1"; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194776.1";
chr21	HAVANA	transcript	38445577	38507726	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000463216.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TTC3-010"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194783.1";
chr21	HAVANA	transcript	38445577	38524267	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000481605.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TTC3-009"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194782.1";
chr21	HAVANA	transcript	38445581	38507752	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000494243.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TTC3-012"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194785.1";
chr21	ENSEMBL	transcript	38445581	38525623	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000540756.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TTC3-202"; level 3; havana_gene "OTTHUMG00000086654.4";
chr21	HAVANA	transcript	38445590	38471398	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000399010.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TTC3-015"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194788.1";
chr21	HAVANA	transcript	38453896	38575413	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000399017.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TTC3-201"; level 2; tag "CCDS"; ccdsid "CCDS13651.1"; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194776.1";
chr21	HAVANA	transcript	38455926	38465702	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000484047.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TTC3-004"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194777.1";
chr21	HAVANA	transcript	38458090	38575413	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000354749.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TTC3-001"; level 2; tag "CCDS"; ccdsid "CCDS13651.1"; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194774.1";
chr21	HAVANA	transcript	38458090	38575413	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000479930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TTC3-002"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194775.1";
chr21	HAVANA	transcript	38463627	38469185	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000460328.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TTC3-013"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194786.1";
chr21	HAVANA	transcript	38463694	38467790	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000491952.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TTC3-014"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194787.1";
chr21	HAVANA	transcript	38480038	38575413	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000476784.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TTC3-007"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194780.1";
chr21	HAVANA	transcript	38516860	38525577	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000414818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TTC3-016"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194789.4";
chr21	HAVANA	transcript	38525425	38537942	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000411496.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TTC3-017"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194790.1";
chr21	HAVANA	transcript	38525537	38538067	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000487711.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TTC3-018"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194791.1";
chr21	HAVANA	transcript	38529043	38558380	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000472398.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TTC3-006"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194779.1";
chr21	HAVANA	transcript	38531821	38538067	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000469939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TTC3-019"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194792.1";
chr21	HAVANA	transcript	38563635	38573922	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000428693.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TTC3-020"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194793.1";
chr21	HAVANA	transcript	38566754	38570248	.	+	.	gene_id "ENSG00000182670.9"; transcript_id "ENST00000488522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TTC3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TTC3-021"; level 2; havana_gene "OTTHUMG00000086654.4"; havana_transcript "OTTHUMT00000194794.1";
chr21	HAVANA	transcript	38559967	38566227	.	-	.	gene_id "ENSG00000228677.1"; transcript_id "ENST00000424733.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001432.11"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001432.11-001"; level 2; havana_gene "OTTHUMG00000086658.1"; havana_transcript "OTTHUMT00000194806.1";
chr21	HAVANA	transcript	38580804	38594041	.	+	.	gene_id "ENSG00000230366.4"; transcript_id "ENST00000454482.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "DSCR9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR9-001"; level 2; havana_gene "OTTHUMG00000086655.1"; havana_transcript "OTTHUMT00000194797.1";
chr21	ENSEMBL	transcript	38592889	38593843	.	+	.	gene_id "ENSG00000230366.4"; transcript_id "ENST00000543267.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "DSCR9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR9-201"; level 3; havana_gene "OTTHUMG00000086655.1";
chr21	HAVANA	transcript	38591910	38600597	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000471543.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DSCR3-014"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000329601.1";
chr21	HAVANA	transcript	38595721	38601784	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000497493.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DSCR3-004"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194810.1";
chr21	HAVANA	transcript	38595721	38639833	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000309117.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DSCR3-001"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194807.1";
chr21	HAVANA	transcript	38595721	38640220	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000399000.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR3-002"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194808.1";
chr21	ENSEMBL	transcript	38595728	38640262	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000288304.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DSCR3-201"; level 3; havana_gene "OTTHUMG00000086659.2";
chr21	ENSEMBL	transcript	38597556	38639623	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000539844.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DSCR3-202"; level 3; havana_gene "OTTHUMG00000086659.2";
chr21	HAVANA	transcript	38597600	38639652	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000399001.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DSCR3-006"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194812.1";
chr21	HAVANA	transcript	38597773	38639647	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000476950.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DSCR3-011"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194817.1";
chr21	HAVANA	transcript	38597817	38639630	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000488368.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR3-003"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194809.1";
chr21	HAVANA	transcript	38597845	38639833	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000398998.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DSCR3-005"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194811.1";
chr21	HAVANA	transcript	38602819	38605743	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000495858.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR3-013"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194819.1";
chr21	HAVANA	transcript	38605593	38639619	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000480452.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "DSCR3-012"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194818.1";
chr21	HAVANA	transcript	38610506	38639704	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000475009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DSCR3-007"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194813.1";
chr21	HAVANA	transcript	38610657	38639602	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000492514.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "DSCR3-008"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194814.1";
chr21	HAVANA	transcript	38633383	38639454	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000462467.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR3-010"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194816.1";
chr21	HAVANA	transcript	38633383	38639641	.	-	.	gene_id "ENSG00000157538.8"; transcript_id "ENST00000498789.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR3-009"; level 2; havana_gene "OTTHUMG00000086659.2"; havana_transcript "OTTHUMT00000194815.1";
chr21	HAVANA	transcript	38593720	38610045	.	+	.	gene_id "ENSG00000242553.1"; transcript_id "ENST00000440629.1"; gene_type "lincRNA"; gene_status "PUTATIVE"; gene_name "AP001432.14"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001432.14-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086656.1"; havana_transcript "OTTHUMT00000194798.1";
chr21	HAVANA	transcript	38739236	38858783	.	+	.	gene_id "ENSG00000157540.14"; transcript_id "ENST00000462274.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DYRK1A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DYRK1A-002"; level 2; havana_gene "OTTHUMG00000086657.2"; havana_transcript "OTTHUMT00000194800.1";
chr21	HAVANA	transcript	38739879	38887680	.	+	.	gene_id "ENSG00000157540.14"; transcript_id "ENST00000338785.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DYRK1A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DYRK1A-001"; level 2; tag "CCDS"; ccdsid "CCDS42926.1"; havana_gene "OTTHUMG00000086657.2"; havana_transcript "OTTHUMT00000194799.1";
chr21	HAVANA	transcript	38739883	38845113	.	+	.	gene_id "ENSG00000157540.14"; transcript_id "ENST00000455097.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DYRK1A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DYRK1A-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086657.2"; havana_transcript "OTTHUMT00000194802.1";
chr21	HAVANA	transcript	38739883	38853007	.	+	.	gene_id "ENSG00000157540.14"; transcript_id "ENST00000426672.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DYRK1A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DYRK1A-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086657.2"; havana_transcript "OTTHUMT00000194803.1";
chr21	HAVANA	transcript	38791207	38887483	.	+	.	gene_id "ENSG00000157540.14"; transcript_id "ENST00000339659.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DYRK1A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DYRK1A-003"; level 2; tag "CCDS"; ccdsid "CCDS13653.1"; havana_gene "OTTHUMG00000086657.2"; havana_transcript "OTTHUMT00000194801.1";
chr21	ENSEMBL	transcript	38791207	38878651	.	+	.	gene_id "ENSG00000157540.14"; transcript_id "ENST00000321219.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DYRK1A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DYRK1A-201"; level 3; havana_gene "OTTHUMG00000086657.2";
chr21	ENSEMBL	transcript	38791207	38878610	.	+	.	gene_id "ENSG00000157540.14"; transcript_id "ENST00000451934.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DYRK1A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DYRK1A-202"; level 3; tag "CCDS"; ccdsid "CCDS42926.1"; havana_gene "OTTHUMG00000086657.2";
chr21	HAVANA	transcript	38792602	38884889	.	+	.	gene_id "ENSG00000157540.14"; transcript_id "ENST00000398960.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DYRK1A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DYRK1A-006"; level 2; tag "CCDS"; ccdsid "CCDS42925.1"; havana_gene "OTTHUMG00000086657.2"; havana_transcript "OTTHUMT00000194804.1";
chr21	HAVANA	transcript	38792627	38845017	.	+	.	gene_id "ENSG00000157540.14"; transcript_id "ENST00000498351.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DYRK1A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DYRK1A-007"; level 2; havana_gene "OTTHUMG00000086657.2"; havana_transcript "OTTHUMT00000194805.1";
chr21	HAVANA	transcript	38792677	38884257	.	+	.	gene_id "ENSG00000157540.14"; transcript_id "ENST00000398956.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DYRK1A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DYRK1A-008"; level 2; tag "non-submitted_evidence"; tag "CCDS"; ccdsid "CCDS13654.1"; havana_gene "OTTHUMG00000086657.2"; havana_transcript "OTTHUMT00000268824.1";
chr21	ENSEMBL	transcript	38861087	38884862	.	+	.	gene_id "ENSG00000157540.14"; transcript_id "ENST00000455387.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DYRK1A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DYRK1A-203"; level 3; havana_gene "OTTHUMG00000086657.2";
chr21	HAVANA	transcript	38996789	39288749	.	-	.	gene_id "ENSG00000157542.7"; transcript_id "ENST00000400482.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ6-201"; level 2; tag "CCDS"; ccdsid "CCDS42927.1"; havana_gene "OTTHUMG00000086667.1"; havana_transcript "OTTHUMT00000194828.1";
chr21	HAVANA	transcript	38997461	39285557	.	-	.	gene_id "ENSG00000157542.7"; transcript_id "ENST00000288309.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ6-001"; level 2; tag "CCDS"; ccdsid "CCDS42927.1"; havana_gene "OTTHUMG00000086667.1"; havana_transcript "OTTHUMT00000194828.1";
chr21	HAVANA	transcript	39089405	39091872	.	-	.	gene_id "ENSG00000233213.1"; transcript_id "ENST00000435001.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001430.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001430.2-001"; level 2; havana_gene "OTTHUMG00000086669.2"; havana_transcript "OTTHUMT00000194830.2";
chr21	HAVANA	transcript	39323728	39493433	.	-	.	gene_id "ENSG00000184029.5"; transcript_id "ENST00000398948.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR4"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DSCR4-002"; level 2; havana_gene "OTTHUMG00000086673.3"; havana_transcript "OTTHUMT00000194835.1";
chr21	HAVANA	transcript	39426313	39493454	.	-	.	gene_id "ENSG00000184029.5"; transcript_id "ENST00000328264.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DSCR4-001"; level 2; havana_gene "OTTHUMG00000086673.3"; havana_transcript "OTTHUMT00000194834.1";
chr21	HAVANA	transcript	39465338	39493425	.	-	.	gene_id "ENSG00000184029.5"; transcript_id "ENST00000482032.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "DSCR4-003"; level 2; havana_gene "OTTHUMG00000086673.3"; havana_transcript "OTTHUMT00000207170.2";
chr21	HAVANA	transcript	39378846	39382920	.	-	.	gene_id "ENSG00000223608.1"; transcript_id "ENST00000417138.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001415.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001415.1-001"; level 2; havana_gene "OTTHUMG00000086672.1"; havana_transcript "OTTHUMT00000194833.1";
chr21	HAVANA	transcript	39493545	39528605	.	+	.	gene_id "ENSG00000198054.7"; transcript_id "ENST00000478613.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR8-002"; level 2; havana_gene "OTTHUMG00000090610.2"; havana_transcript "OTTHUMT00000207193.1";
chr21	HAVANA	transcript	39493567	39528605	.	+	.	gene_id "ENSG00000198054.7"; transcript_id "ENST00000469658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR8-001"; level 2; havana_gene "OTTHUMG00000090610.2"; havana_transcript "OTTHUMT00000207192.1";
chr21	HAVANA	transcript	39493567	39528605	.	+	.	gene_id "ENSG00000198054.7"; transcript_id "ENST00000400477.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DSCR8-003"; level 2; havana_gene "OTTHUMG00000090610.2"; havana_transcript "OTTHUMT00000207194.1";
chr21	HAVANA	transcript	39493567	39528605	.	+	.	gene_id "ENSG00000198054.7"; transcript_id "ENST00000495344.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR8-004"; level 2; tag "non_canonical_TEC"; havana_gene "OTTHUMG00000090610.2"; havana_transcript "OTTHUMT00000207195.1";
chr21	HAVANA	transcript	39493567	39528605	.	+	.	gene_id "ENSG00000198054.7"; transcript_id "ENST00000465532.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR8-005"; level 2; havana_gene "OTTHUMG00000090610.2"; havana_transcript "OTTHUMT00000207196.1";
chr21	HAVANA	transcript	39493567	39528605	.	+	.	gene_id "ENSG00000198054.7"; transcript_id "ENST00000357704.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DSCR8-006"; level 2; havana_gene "OTTHUMG00000090610.2"; havana_transcript "OTTHUMT00000207197.1";
chr21	HAVANA	transcript	39527643	39560110	.	+	.	gene_id "ENSG00000198054.7"; transcript_id "ENST00000472602.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCR8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR8-007"; level 2; havana_gene "OTTHUMG00000090610.2"; havana_transcript "OTTHUMT00000207198.1";
chr21	ENSEMBL	transcript	39559551	39559656	.	-	.	gene_id "ENSG00000238581.1"; transcript_id "ENST00000459411.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13.147"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.147-201"; level 3;
chr21	HAVANA	transcript	39578250	39580738	.	+	.	gene_id "ENSG00000233316.3"; transcript_id "ENST00000432141.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "DSCR10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR10-001"; level 2; havana_gene "OTTHUMG00000090611.1"; havana_transcript "OTTHUMT00000207199.1";
chr21	ENSEMBL	transcript	39580229	39580554	.	+	.	gene_id "ENSG00000233316.3"; transcript_id "ENST00000538415.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "DSCR10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "DSCR10-201"; level 3; havana_gene "OTTHUMG00000090611.1";
chr21	HAVANA	transcript	39609139	39610123	.	-	.	gene_id "ENSG00000226012.1"; transcript_id "ENST00000444977.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001434.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001434.2-001"; level 2; havana_gene "OTTHUMG00000090613.1"; havana_transcript "OTTHUMT00000207201.1";
chr21	HAVANA	transcript	39610149	39610586	.	-	.	gene_id "ENSG00000231123.1"; transcript_id "ENST00000423089.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001434.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001434.1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000090612.1"; havana_transcript "OTTHUMT00000207200.1";
chr21	HAVANA	transcript	39628663	39671367	.	+	.	gene_id "ENSG00000157551.11"; transcript_id "ENST00000398925.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ15-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "not_organism-supported"; havana_gene "OTTHUMG00000090609.3"; havana_transcript "OTTHUMT00000207187.1";
chr21	HAVANA	transcript	39628663	39671653	.	+	.	gene_id "ENSG00000157551.11"; transcript_id "ENST00000398928.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ15-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "not_organism-supported"; havana_gene "OTTHUMG00000090609.3"; havana_transcript "OTTHUMT00000207186.1";
chr21	HAVANA	transcript	39628663	39673743	.	+	.	gene_id "ENSG00000157551.11"; transcript_id "ENST00000328656.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ15-001"; level 2; tag "CCDS"; ccdsid "CCDS13656.1"; havana_gene "OTTHUMG00000090609.3"; havana_transcript "OTTHUMT00000207181.1";
chr21	HAVANA	transcript	39628664	39671302	.	+	.	gene_id "ENSG00000157551.11"; transcript_id "ENST00000443341.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ15-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "not_organism-supported"; havana_gene "OTTHUMG00000090609.3"; havana_transcript "OTTHUMT00000207185.1";
chr21	HAVANA	transcript	39628797	39671241	.	+	.	gene_id "ENSG00000157551.11"; transcript_id "ENST00000417042.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ15-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "not_organism-supported"; havana_gene "OTTHUMG00000090609.3"; havana_transcript "OTTHUMT00000207188.1";
chr21	HAVANA	transcript	39628870	39673412	.	+	.	gene_id "ENSG00000157551.11"; transcript_id "ENST00000398938.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ15-201"; level 2; tag "CCDS"; ccdsid "CCDS13656.1"; havana_gene "OTTHUMG00000090609.3"; havana_transcript "OTTHUMT00000207182.1";
chr21	HAVANA	transcript	39644172	39673412	.	+	.	gene_id "ENSG00000157551.11"; transcript_id "ENST00000398932.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ15-003"; level 2; tag "not_organism-supported"; tag "CCDS"; ccdsid "CCDS13656.1"; havana_gene "OTTHUMG00000090609.3"; havana_transcript "OTTHUMT00000207183.1";
chr21	HAVANA	transcript	39644217	39671919	.	+	.	gene_id "ENSG00000157551.11"; transcript_id "ENST00000438657.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ15-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090609.3"; havana_transcript "OTTHUMT00000207190.1";
chr21	HAVANA	transcript	39644345	39673743	.	+	.	gene_id "ENSG00000157551.11"; transcript_id "ENST00000398930.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ15-004"; level 2; tag "not_organism-supported"; tag "CCDS"; ccdsid "CCDS13656.1"; havana_gene "OTTHUMG00000090609.3"; havana_transcript "OTTHUMT00000207184.1";
chr21	HAVANA	transcript	39644429	39673748	.	+	.	gene_id "ENSG00000157551.11"; transcript_id "ENST00000398934.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ15-002"; level 2; tag "CCDS"; ccdsid "CCDS13656.1"; havana_gene "OTTHUMG00000090609.3"; havana_transcript "OTTHUMT00000207182.1";
chr21	HAVANA	transcript	39668479	39671653	.	+	.	gene_id "ENSG00000157551.11"; transcript_id "ENST00000398927.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ15-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090609.3"; havana_transcript "OTTHUMT00000207189.1";
chr21	HAVANA	transcript	39668848	39671600	.	+	.	gene_id "ENSG00000157551.11"; transcript_id "ENST00000419868.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KCNJ15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KCNJ15-011"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090609.3"; havana_transcript "OTTHUMT00000207191.1";
chr21	HAVANA	transcript	39695557	39705286	.	-	.	gene_id "ENSG00000231231.1"; transcript_id "ENST00000414189.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001422.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001422.3-002"; level 2; havana_gene "OTTHUMG00000090768.1"; havana_transcript "OTTHUMT00000207543.1";
chr21	HAVANA	transcript	39698274	39705343	.	-	.	gene_id "ENSG00000231231.1"; transcript_id "ENST00000436845.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001422.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001422.3-001"; level 2; havana_gene "OTTHUMG00000090768.1"; havana_transcript "OTTHUMT00000207542.1";
chr21	HAVANA	transcript	39751949	39870366	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000398905.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ERG-005"; level 2; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000207535.1";
chr21	HAVANA	transcript	39751949	39870366	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000398907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ERG-009"; level 2; tag "not_organism-supported"; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000207539.1";
chr21	HAVANA	transcript	39751949	39870407	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000288319.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ERG-001"; level 2; tag "CCDS"; ccdsid "CCDS13658.1"; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000207531.1";
chr21	HAVANA	transcript	39751949	39956824	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000398897.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ERG-004"; level 2; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000207534.1";
chr21	HAVANA	transcript	39751949	39956869	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000398911.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ERG-007"; level 2; tag "CCDS"; ccdsid "CCDS13657.1"; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000207537.1";
chr21	HAVANA	transcript	39751949	40033618	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000417133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ERG-002"; level 2; tag "CCDS"; ccdsid "CCDS46648.1"; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000207532.2";
chr21	HAVANA	transcript	39751949	40033618	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000398910.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ERG-008"; level 2; tag "not_organism-supported"; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000207538.1";
chr21	ENSEMBL	transcript	39751952	40033704	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000442448.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ERG-202"; level 3; tag "CCDS"; ccdsid "CCDS13657.1"; havana_gene "OTTHUMG00000090767.3";
chr21	HAVANA	transcript	39755048	39870400	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000453032.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ERG-014"; level 2; tag "CCDS"; ccdsid "CCDS46649.1"; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000376660.1";
chr21	HAVANA	transcript	39755213	40032591	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000398919.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ERG-013"; level 2; tag "CCDS"; ccdsid "CCDS46648.1"; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000340206.1";
chr21	HAVANA	transcript	39763581	39870380	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000481609.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ERG-011"; level 2; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000207541.1";
chr21	ENSEMBL	transcript	39763872	39870345	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000429727.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ERG-201"; level 3; havana_gene "OTTHUMG00000090767.3";
chr21	HAVANA	transcript	39767292	39817544	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000492833.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ERG-012"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000340205.1";
chr21	HAVANA	transcript	39771994	40033618	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000468474.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ERG-003"; level 2; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000207533.1";
chr21	HAVANA	transcript	39775526	39821028	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000473107.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ERG-010"; level 2; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000207540.1";
chr21	HAVANA	transcript	39842698	40033618	.	-	.	gene_id "ENSG00000157554.14"; transcript_id "ENST00000485493.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ERG"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ERG-006"; level 2; havana_gene "OTTHUMG00000090767.3"; havana_transcript "OTTHUMT00000207536.1";
chr21	HAVANA	transcript	39874369	39874545	.	+	.	gene_id "ENSG00000231480.1"; transcript_id "ENST00000442212.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "SNRPGP13"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "SNRPGP13-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000090770.1"; havana_transcript "OTTHUMT00000207548.1";
chr21	HAVANA	transcript	40110825	40124181	.	-	.	gene_id "ENSG00000223806.2"; transcript_id "ENST00000426607.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00114"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00114-005"; level 2; havana_gene "OTTHUMG00000090771.1"; havana_transcript "OTTHUMT00000207553.1";
chr21	HAVANA	transcript	40110945	40119384	.	-	.	gene_id "ENSG00000223806.2"; transcript_id "ENST00000429621.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00114"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00114-002"; level 2; havana_gene "OTTHUMG00000090771.1"; havana_transcript "OTTHUMT00000207550.1";
chr21	HAVANA	transcript	40110945	40140898	.	-	.	gene_id "ENSG00000223806.2"; transcript_id "ENST00000442549.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00114"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00114-003"; level 2; havana_gene "OTTHUMG00000090771.1"; havana_transcript "OTTHUMT00000207551.1";
chr21	HAVANA	transcript	40110945	40114441	.	-	.	gene_id "ENSG00000223806.2"; transcript_id "ENST00000411989.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00114"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00114-004"; level 2; havana_gene "OTTHUMG00000090771.1"; havana_transcript "OTTHUMT00000207552.1";
chr21	HAVANA	transcript	40110945	40113977	.	-	.	gene_id "ENSG00000223806.2"; transcript_id "ENST00000448579.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00114"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00114-001"; level 2; havana_gene "OTTHUMG00000090771.1"; havana_transcript "OTTHUMT00000207549.1";
chr21	HAVANA	transcript	40177231	40196879	.	+	.	gene_id "ENSG00000157557.7"; transcript_id "ENST00000360214.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ETS2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ETS2-001"; level 2; tag "CCDS"; ccdsid "CCDS13659.1"; havana_gene "OTTHUMG00000090769.5"; havana_transcript "OTTHUMT00000207544.1";
chr21	HAVANA	transcript	40177755	40196879	.	+	.	gene_id "ENSG00000157557.7"; transcript_id "ENST00000360938.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ETS2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ETS2-002"; level 2; tag "CCDS"; ccdsid "CCDS13659.1"; havana_gene "OTTHUMG00000090769.5"; havana_transcript "OTTHUMT00000207545.1";
chr21	HAVANA	transcript	40177875	40186905	.	+	.	gene_id "ENSG00000157557.7"; transcript_id "ENST00000432278.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ETS2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ETS2-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090769.5"; havana_transcript "OTTHUMT00000207546.5";
chr21	HAVANA	transcript	40181560	40190570	.	+	.	gene_id "ENSG00000157557.7"; transcript_id "ENST00000456966.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ETS2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ETS2-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090769.5"; havana_transcript "OTTHUMT00000207547.5";
chr21	HAVANA	transcript	40218171	40220568	.	+	.	gene_id "ENSG00000229986.1"; transcript_id "ENST00000416842.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001042.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001042.1-001"; level 2; havana_gene "OTTHUMG00000086700.1"; havana_transcript "OTTHUMT00000194935.1";
chr21	ENSEMBL	transcript	40249215	40310353	.	-	.	gene_id "ENSG00000205622.4"; transcript_id "ENST00000544859.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF064858.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF064858.6-201"; level 3; havana_gene "OTTHUMG00000066036.3";
chr21	HAVANA	transcript	40249215	40310353	.	-	.	gene_id "ENSG00000205622.4"; transcript_id "ENST00000380931.2"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF064858.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF064858.6-001"; level 2; havana_gene "OTTHUMG00000066036.3"; havana_transcript "OTTHUMT00000141410.2";
chr21	HAVANA	transcript	40252231	40328392	.	-	.	gene_id "ENSG00000205622.4"; transcript_id "ENST00000415824.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF064858.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF064858.6-002"; level 2; havana_gene "OTTHUMG00000066036.3"; havana_transcript "OTTHUMT00000194933.2";
chr21	HAVANA	transcript	40260696	40275829	.	+	.	gene_id "ENSG00000229925.1"; transcript_id "ENST00000434589.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001043.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001043.1-001"; level 2; havana_gene "OTTHUMG00000086701.1"; havana_transcript "OTTHUMT00000194936.1";
chr21	ENSEMBL	transcript	40266709	40266791	.	+	.	gene_id "ENSG00000252384.1"; transcript_id "ENST00000516575.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA62.6"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA62.6-201"; level 3;
chr21	HAVANA	transcript	40266841	40267176	.	+	.	gene_id "ENSG00000227721.1"; transcript_id "ENST00000451820.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001043.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001043.2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086703.1"; havana_transcript "OTTHUMT00000194938.1";
chr21	HAVANA	transcript	40285093	40287072	.	-	.	gene_id "ENSG00000234035.1"; transcript_id "ENST00000440379.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001044.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001044.2-001"; level 2; havana_gene "OTTHUMG00000086699.1"; havana_transcript "OTTHUMT00000194934.1";
chr21	HAVANA	transcript	40346355	40349700	.	-	.	gene_id "ENSG00000232837.1"; transcript_id "ENST00000433952.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF064858.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF064858.7-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000066032.1"; havana_transcript "OTTHUMT00000141402.1";
chr21	HAVANA	transcript	40360633	40378079	.	-	.	gene_id "ENSG00000235888.1"; transcript_id "ENST00000417335.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF064858.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF064858.8-001"; level 2; havana_gene "OTTHUMG00000066035.2"; havana_transcript "OTTHUMT00000141409.2";
chr21	HAVANA	transcript	40378574	40383255	.	-	.	gene_id "ENSG00000237721.1"; transcript_id "ENST00000419664.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF064858.11"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF064858.11-001"; level 2; havana_gene "OTTHUMG00000086702.1"; havana_transcript "OTTHUMT00000194937.1";
chr21	HAVANA	transcript	40400461	40401053	.	-	.	gene_id "ENSG00000237609.1"; transcript_id "ENST00000440714.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF064858.10"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF064858.10-001"; level 2; havana_gene "OTTHUMG00000066033.2"; havana_transcript "OTTHUMT00000141403.2";
chr21	HAVANA	transcript	40499494	40499966	.	+	.	gene_id "ENSG00000228861.3"; transcript_id "ENST00000467573.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AF064859.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AF064859.2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000066031.2"; havana_transcript "OTTHUMT00000141401.2";
chr21	HAVANA	transcript	40543056	40544032	.	-	.	gene_id "ENSG00000235701.1"; transcript_id "ENST00000437262.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "PCBP2P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "PCBP2P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000066029.2"; havana_transcript "OTTHUMT00000141397.2";
chr21	HAVANA	transcript	40546695	40555777	.	-	.	gene_id "ENSG00000183527.6"; transcript_id "ENST00000331573.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PSMG1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PSMG1-001"; level 2; tag "CCDS"; ccdsid "CCDS13660.1"; havana_gene "OTTHUMG00000066034.4"; havana_transcript "OTTHUMT00000141404.2";
chr21	HAVANA	transcript	40547384	40550746	.	-	.	gene_id "ENSG00000183527.6"; transcript_id "ENST00000481921.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PSMG1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PSMG1-004"; level 2; havana_gene "OTTHUMG00000066034.4"; havana_transcript "OTTHUMT00000141407.2";
chr21	HAVANA	transcript	40547384	40552364	.	-	.	gene_id "ENSG00000183527.6"; transcript_id "ENST00000440607.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PSMG1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PSMG1-003"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000066034.4"; havana_transcript "OTTHUMT00000141406.1";
chr21	HAVANA	transcript	40547514	40555213	.	-	.	gene_id "ENSG00000183527.6"; transcript_id "ENST00000411828.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PSMG1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PSMG1-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000066034.4"; havana_transcript "OTTHUMT00000141408.3";
chr21	HAVANA	transcript	40547516	40555311	.	-	.	gene_id "ENSG00000183527.6"; transcript_id "ENST00000431628.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PSMG1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PSMG1-006"; level 2; tag "CCDS"; ccdsid "CCDS13661.1"; havana_gene "OTTHUMG00000066034.4"; havana_transcript "OTTHUMT00000194931.2";
chr21	HAVANA	transcript	40547516	40555414	.	-	.	gene_id "ENSG00000183527.6"; transcript_id "ENST00000380900.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PSMG1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PSMG1-002"; level 2; tag "CCDS"; ccdsid "CCDS13661.1"; havana_gene "OTTHUMG00000066034.4"; havana_transcript "OTTHUMT00000141405.2";
chr21	HAVANA	transcript	40556102	40685745	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000333229.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BRWD1-001"; level 2; tag "CCDS"; ccdsid "CCDS13662.1"; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000141398.3";
chr21	HAVANA	transcript	40559172	40636867	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000446924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BRWD1-009"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000194962.2";
chr21	HAVANA	transcript	40562145	40685496	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000342449.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BRWD1-002"; level 2; tag "CCDS"; ccdsid "CCDS13663.1"; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000141399.2";
chr21	HAVANA	transcript	40565743	40685516	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000380800.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "BRWD1-016"; level 2; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000339983.1";
chr21	HAVANA	transcript	40571345	40572422	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000491564.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BRWD1-007"; level 2; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000141588.1";
chr21	HAVANA	transcript	40574292	40601318	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000424441.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BRWD1-010"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000194963.1";
chr21	ENSEMBL	transcript	40574292	40685556	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000380783.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BRWD1-201"; level 3; havana_gene "OTTHUMG00000066030.7";
chr21	HAVANA	transcript	40581712	40590586	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000473813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BRWD1-006"; level 2; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000141587.2";
chr21	HAVANA	transcript	40608644	40652139	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000445668.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BRWD1-011"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000194964.2";
chr21	HAVANA	transcript	40608644	40652139	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000430093.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BRWD1-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000194965.2";
chr21	HAVANA	transcript	40608644	40652139	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000445245.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BRWD1-013"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000194966.2";
chr21	HAVANA	transcript	40608645	40652139	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000455867.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "BRWD1-014"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000194967.1";
chr21	HAVANA	transcript	40608645	40652139	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000412604.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "BRWD1-015"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000194968.2";
chr21	HAVANA	transcript	40650423	40652133	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000496759.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BRWD1-003"; level 2; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000141400.1";
chr21	HAVANA	transcript	40668363	40685568	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000341322.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BRWD1-004"; level 2; tag "CCDS"; ccdsid "CCDS33557.1"; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000141585.1";
chr21	HAVANA	transcript	40670016	40693485	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000470108.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BRWD1-008"; level 2; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000157385.2";
chr21	HAVANA	transcript	40684489	40685227	.	-	.	gene_id "ENSG00000185658.8"; transcript_id "ENST00000484090.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BRWD1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BRWD1-005"; level 2; havana_gene "OTTHUMG00000066030.7"; havana_transcript "OTTHUMT00000141586.1";
chr21	HAVANA	transcript	40588550	40589432	.	+	.	gene_id "ENSG00000232608.1"; transcript_id "ENST00000419324.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AF129408.14"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AF129408.14-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000066153.1"; havana_transcript "OTTHUMT00000141589.1";
chr21	HAVANA	transcript	40589019	40591731	.	-	.	gene_id "ENSG00000237373.1"; transcript_id "ENST00000435608.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AF129408.16"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AF129408.16-001"; level 2; havana_gene "OTTHUMG00000133692.1"; havana_transcript "OTTHUMT00000257943.1";
chr21	HAVANA	transcript	40607312	40607946	.	-	.	gene_id "ENSG00000229623.1"; transcript_id "ENST00000438852.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AF129408.15"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AF129408.15-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000066177.1"; havana_transcript "OTTHUMT00000141644.1";
chr21	HAVANA	transcript	40685888	40686369	.	-	.	gene_id "ENSG00000255568.1"; transcript_id "ENST00000539811.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NCRNA00257"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00257-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000066154.3"; havana_transcript "OTTHUMT00000141590.3";
chr21	HAVANA	transcript	40687633	40695144	.	+	.	gene_id "ENSG00000238141.2"; transcript_id "ENST00000423274.2"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF064861.94"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF064861.94-001"; level 2; havana_gene "OTTHUMG00000133705.2"; havana_transcript "OTTHUMT00000257965.2";
chr21	HAVANA	transcript	40714241	40720917	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000288344.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HMGN1-004"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141734.2";
chr21	HAVANA	transcript	40714241	40721025	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000486741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "HMGN1-006"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141736.2";
chr21	HAVANA	transcript	40714241	40721066	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000431390.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HMGN1-002"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141646.4";
chr21	HAVANA	transcript	40714241	40721126	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000380749.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HMGN1-001"; level 2; tag "CCDS"; ccdsid "CCDS33559.1"; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141645.2";
chr21	HAVANA	transcript	40714241	40721270	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000492280.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "HMGN1-003"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141647.2";
chr21	ENSEMBL	transcript	40714242	40718454	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000361263.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HMGN1-201"; level 3; havana_gene "OTTHUMG00000066178.4";
chr21	HAVANA	transcript	40714572	40721014	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000436324.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HMGN1-009"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141739.2";
chr21	HAVANA	transcript	40714618	40720979	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000380748.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "HMGN1-018"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000194977.1";
chr21	HAVANA	transcript	40714714	40720966	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000419378.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HMGN1-015"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000194974.2";
chr21	HAVANA	transcript	40714726	40720788	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000489072.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "HMGN1-012"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141742.2";
chr21	HAVANA	transcript	40714730	40720549	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000482192.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "HMGN1-008"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141738.1";
chr21	HAVANA	transcript	40714805	40721573	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000380747.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "HMGN1-013"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141743.1";
chr21	HAVANA	transcript	40714835	40720523	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000485550.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "HMGN1-021"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000194980.1";
chr21	HAVANA	transcript	40714904	40720265	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000490032.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "HMGN1-010"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141740.2";
chr21	HAVANA	transcript	40714935	40720980	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000443046.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "HMGN1-017"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000194976.2";
chr21	HAVANA	transcript	40715063	40720980	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000464078.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "HMGN1-007"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141737.1";
chr21	HAVANA	transcript	40719073	40720993	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000491183.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "HMGN1-016"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000194975.1";
chr21	HAVANA	transcript	40719262	40720941	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000479586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "HMGN1-019"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000194978.1";
chr21	HAVANA	transcript	40719418	40720546	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000471260.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "HMGN1-020"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000194979.1";
chr21	HAVANA	transcript	40719921	40720946	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000482733.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "HMGN1-014"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141744.1";
chr21	HAVANA	transcript	40719991	40720980	.	-	.	gene_id "ENSG00000205581.6"; transcript_id "ENST00000463631.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HMGN1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "HMGN1-005"; level 2; havana_gene "OTTHUMG00000066178.4"; havana_transcript "OTTHUMT00000141735.1";
chr21	ENSEMBL	transcript	40716463	40716554	.	+	.	gene_id "ENSG00000252915.1"; transcript_id "ENST00000517106.1"; gene_type "misc_RNA"; gene_status "NOVEL"; gene_name "Y_RNA.853"; transcript_type "misc_RNA"; transcript_status "NOVEL"; transcript_name "Y_RNA.853-201"; level 3;
chr21	ENSEMBL	transcript	40717300	40717383	.	-	.	gene_id "ENSG00000238556.1"; transcript_id "ENST00000459446.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13.131"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.131-201"; level 3;
chr21	ENSEMBL	transcript	40722819	40723036	.	-	.	gene_id "ENSG00000244408.1"; transcript_id "ENST00000495066.1"; gene_type "scRNA_pseudogene"; gene_status "NOVEL"; gene_name "AF064861.1"; transcript_type "scRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AF064861.1-201"; level 3;
chr21	HAVANA	transcript	40745689	40748992	.	-	.	gene_id "ENSG00000227406.1"; transcript_id "ENST00000444889.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AF064861.93"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AF064861.93-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000102163.1"; havana_transcript "OTTHUMT00000220008.1";
chr21	HAVANA	transcript	40752170	40769815	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000333781.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "WRB-001"; level 2; tag "CCDS"; ccdsid "CCDS13664.1"; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000141745.3";
chr21	ENSEMBL	transcript	40752280	40786214	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000541890.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "WRB-201"; level 3; havana_gene "OTTHUMG00000066250.13";
chr21	HAVANA	transcript	40752320	40763972	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000487869.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "WRB-005"; level 2; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000141749.2";
chr21	HAVANA	transcript	40752340	40763131	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000471468.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "WRB-008"; level 2; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000194972.1";
chr21	HAVANA	transcript	40752384	40769042	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000398753.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "WRB-002"; level 2; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000141746.3";
chr21	HAVANA	transcript	40752413	40762729	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000442773.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "WRB-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000141747.2";
chr21	HAVANA	transcript	40758019	40765206	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000380713.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "WRB-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000194973.12";
chr21	HAVANA	transcript	40759691	40769815	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000380708.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "WRB-004"; level 2; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000141748.2";
chr21	HAVANA	transcript	40759717	40769180	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000466787.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "WRB-006"; level 2; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000141750.2";
chr21	HAVANA	transcript	40764822	40769030	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000490860.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "WRB-007"; level 2; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000141751.1";
chr21	HAVANA	transcript	40765149	40778372	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000415847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "WRB-013"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000334400.1";
chr21	HAVANA	transcript	40765149	40778398	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000417111.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "WRB-012"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000334399.1";
chr21	HAVANA	transcript	40765152	40800301	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000488295.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "WRB-010"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000329347.1";
chr21	HAVANA	transcript	40765152	40800301	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000471225.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "WRB-011"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000329348.1";
chr21	HAVANA	transcript	40782795	40800454	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000478273.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "WRB-018"; level 2; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000141832.1";
chr21	HAVANA	transcript	40797797	40800454	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000476914.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "WRB-017"; level 2; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000141805.1";
chr21	HAVANA	transcript	40797845	40800454	.	+	.	gene_id "ENSG00000182093.8"; transcript_id "ENST00000480690.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WRB"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "WRB-016"; level 2; havana_gene "OTTHUMG00000066250.13"; havana_transcript "OTTHUMT00000141804.1";
chr21	HAVANA	transcript	40777770	40817703	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000288350.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LCA5L-001"; level 2; tag "CCDS"; ccdsid "CCDS13665.1"; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141806.3";
chr21	HAVANA	transcript	40777770	40816128	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000380671.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LCA5L-002"; level 2; tag "CCDS"; ccdsid "CCDS13665.1"; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141807.2";
chr21	HAVANA	transcript	40777786	40817659	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000358268.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LCA5L-201"; level 2; tag "CCDS"; ccdsid "CCDS13665.1"; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141807.2";
chr21	HAVANA	transcript	40777904	40783073	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000495240.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LCA5L-020"; level 2; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141836.1";
chr21	HAVANA	transcript	40783644	40817678	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000484878.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LCA5L-016"; level 2; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141821.1";
chr21	HAVANA	transcript	40793990	40810862	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000468009.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LCA5L-005"; level 2; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141810.1";
chr21	HAVANA	transcript	40794338	40817703	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000485895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LCA5L-006"; level 2; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141811.2";
chr21	HAVANA	transcript	40794338	40817731	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000491625.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LCA5L-003"; level 2; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141808.2";
chr21	HAVANA	transcript	40794914	40817687	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000459939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LCA5L-021"; level 2; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000194971.1";
chr21	HAVANA	transcript	40795166	40817701	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000490184.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LCA5L-007"; level 2; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141812.1";
chr21	HAVANA	transcript	40795171	40817686	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000418018.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LCA5L-019"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141835.1";
chr21	HAVANA	transcript	40795346	40817659	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000466954.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LCA5L-012"; level 2; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141817.2";
chr21	HAVANA	transcript	40800097	40817704	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000448288.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LCA5L-014"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141819.2";
chr21	HAVANA	transcript	40800134	40817729	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000434281.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LCA5L-018"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141834.2";
chr21	HAVANA	transcript	40800136	40817645	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000438404.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LCA5L-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141814.2";
chr21	HAVANA	transcript	40800141	40817659	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000411566.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LCA5L-013"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141818.2";
chr21	HAVANA	transcript	40800211	40817695	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000415863.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LCA5L-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141815.2";
chr21	HAVANA	transcript	40800231	40817695	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000426783.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LCA5L-015"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141820.2";
chr21	HAVANA	transcript	40800328	40817706	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000456017.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LCA5L-017"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141833.2";
chr21	HAVANA	transcript	40800388	40817678	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000451131.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LCA5L-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141813.3";
chr21	HAVANA	transcript	40815385	40817679	.	-	.	gene_id "ENSG00000157578.7"; transcript_id "ENST00000480612.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LCA5L"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "LCA5L-011"; level 2; havana_gene "OTTHUMG00000066280.4"; havana_transcript "OTTHUMT00000141816.1";
chr21	HAVANA	transcript	40817781	40887433	.	+	.	gene_id "ENSG00000185437.9"; transcript_id "ENST00000380637.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SH3BGR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SH3BGR-002"; level 2; tag "CCDS"; ccdsid "CCDS33560.1"; havana_gene "OTTHUMG00000074113.11"; havana_transcript "OTTHUMT00000157378.1";
chr21	HAVANA	transcript	40817791	40887282	.	+	.	gene_id "ENSG00000185437.9"; transcript_id "ENST00000380634.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SH3BGR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SH3BGR-007"; level 2; tag "CCDS"; ccdsid "CCDS33560.1"; havana_gene "OTTHUMG00000074113.11"; havana_transcript "OTTHUMT00000194961.2";
chr21	HAVANA	transcript	40817801	40887197	.	+	.	gene_id "ENSG00000185437.9"; transcript_id "ENST00000458295.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SH3BGR"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SH3BGR-004"; level 2; havana_gene "OTTHUMG00000074113.11"; havana_transcript "OTTHUMT00000157380.2";
chr21	HAVANA	transcript	40817857	40883633	.	+	.	gene_id "ENSG00000185437.9"; transcript_id "ENST00000440288.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SH3BGR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SH3BGR-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000074113.11"; havana_transcript "OTTHUMT00000157381.3";
chr21	HAVANA	transcript	40817868	40887134	.	+	.	gene_id "ENSG00000185437.9"; transcript_id "ENST00000380631.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SH3BGR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SH3BGR-006"; level 2; tag "CCDS"; ccdsid "CCDS33560.1"; havana_gene "OTTHUMG00000074113.11"; havana_transcript "OTTHUMT00000157382.1";
chr21	HAVANA	transcript	40823756	40887433	.	+	.	gene_id "ENSG00000185437.9"; transcript_id "ENST00000333634.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SH3BGR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SH3BGR-001"; level 2; tag "CCDS"; ccdsid "CCDS13666.1"; havana_gene "OTTHUMG00000074113.11"; havana_transcript "OTTHUMT00000157377.6";
chr21	HAVANA	transcript	40824049	40887433	.	+	.	gene_id "ENSG00000185437.9"; transcript_id "ENST00000452550.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SH3BGR"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SH3BGR-008"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000074113.11"; havana_transcript "OTTHUMT00000194989.1";
chr21	HAVANA	transcript	40834460	40883702	.	+	.	gene_id "ENSG00000185437.9"; transcript_id "ENST00000423596.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SH3BGR"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SH3BGR-010"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000074113.11"; havana_transcript "OTTHUMT00000346198.1";
chr21	HAVANA	transcript	40871749	40887433	.	+	.	gene_id "ENSG00000185437.9"; transcript_id "ENST00000447939.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SH3BGR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SH3BGR-009"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000074113.11"; havana_transcript "OTTHUMT00000322820.1";
chr21	HAVANA	transcript	40860253	40860686	.	+	.	gene_id "ENSG00000235808.1"; transcript_id "ENST00000450079.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MYL6P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "MYL6P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086714.1"; havana_transcript "OTTHUMT00000194982.1";
chr21	HAVANA	transcript	40863470	40863824	.	-	.	gene_id "ENSG00000228349.1"; transcript_id "ENST00000431743.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPS26P4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPS26P4-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086713.1"; havana_transcript "OTTHUMT00000194981.1";
chr21	HAVANA	transcript	40897510	40901782	.	+	.	gene_id "ENSG00000235012.1"; transcript_id "ENST00000411867.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AF121897.4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AF121897.4-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086715.1"; havana_transcript "OTTHUMT00000194983.1";
chr21	HAVANA	transcript	40928369	41034816	.	+	.	gene_id "ENSG00000183778.12"; transcript_id "ENST00000380620.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "B3GALT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "B3GALT5-001"; level 2; tag "CCDS"; ccdsid "CCDS13667.1"; havana_gene "OTTHUMG00000086725.1"; havana_transcript "OTTHUMT00000195008.1";
chr21	HAVANA	transcript	40928411	40935511	.	+	.	gene_id "ENSG00000183778.12"; transcript_id "ENST00000475838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "B3GALT5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "B3GALT5-003"; level 2; havana_gene "OTTHUMG00000086725.1"; havana_transcript "OTTHUMT00000195010.1";
chr21	HAVANA	transcript	41029254	41034816	.	+	.	gene_id "ENSG00000183778.12"; transcript_id "ENST00000380618.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "B3GALT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "B3GALT5-201"; level 2; tag "CCDS"; ccdsid "CCDS13667.1"; havana_gene "OTTHUMG00000086725.1"; havana_transcript "OTTHUMT00000195009.1";
chr21	HAVANA	transcript	41029704	41034815	.	+	.	gene_id "ENSG00000183778.12"; transcript_id "ENST00000343118.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "B3GALT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "B3GALT5-002"; level 2; tag "CCDS"; ccdsid "CCDS13667.1"; havana_gene "OTTHUMG00000086725.1"; havana_transcript "OTTHUMT00000195009.1";
chr21	ENSEMBL	transcript	41029704	41034815	.	+	.	gene_id "ENSG00000183778.12"; transcript_id "ENST00000398714.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "B3GALT5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "B3GALT5-202"; level 3; tag "CCDS"; ccdsid "CCDS13667.1"; havana_gene "OTTHUMG00000086725.1";
chr21	HAVANA	transcript	40969074	40971583	.	-	.	gene_id "ENSG00000184809.8"; transcript_id "ENST00000489821.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf88"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf88-003"; level 2; havana_gene "OTTHUMG00000086722.1"; havana_transcript "OTTHUMT00000195001.1";
chr21	HAVANA	transcript	40969074	40984368	.	-	.	gene_id "ENSG00000184809.8"; transcript_id "ENST00000380612.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf88"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf88-001"; level 2; havana_gene "OTTHUMG00000086722.1"; havana_transcript "OTTHUMT00000194999.1";
chr21	HAVANA	transcript	40977526	40984368	.	-	.	gene_id "ENSG00000184809.8"; transcript_id "ENST00000380604.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf88"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf88-004"; level 2; havana_gene "OTTHUMG00000086722.1"; havana_transcript "OTTHUMT00000195002.1";
chr21	HAVANA	transcript	40977526	40984748	.	-	.	gene_id "ENSG00000184809.8"; transcript_id "ENST00000329618.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf88"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf88-002"; level 2; havana_gene "OTTHUMG00000086722.1"; havana_transcript "OTTHUMT00000195000.1";
chr21	HAVANA	transcript	41002198	41098012	.	+	.	gene_id "ENSG00000225330.1"; transcript_id "ENST00000416555.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF064860.5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF064860.5-001"; level 2; havana_gene "OTTHUMG00000086721.1"; havana_transcript "OTTHUMT00000194998.1";
chr21	HAVANA	transcript	41099682	41102607	.	+	.	gene_id "ENSG00000231713.2"; transcript_id "ENST00000457325.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF064860.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF064860.7-001"; level 2; havana_gene "OTTHUMG00000086723.2"; havana_transcript "OTTHUMT00000195003.1";
chr21	HAVANA	transcript	41099773	41101611	.	+	.	gene_id "ENSG00000231713.2"; transcript_id "ENST00000419826.2"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF064860.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF064860.7-002"; level 2; havana_gene "OTTHUMG00000086723.2"; havana_transcript "OTTHUMT00000195004.2";
chr21	HAVANA	transcript	41117334	41174023	.	+	.	gene_id "ENSG00000183067.5"; transcript_id "ENST00000380588.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGSF5"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "IGSF5-001"; level 2; tag "CCDS"; ccdsid "CCDS33562.1"; havana_gene "OTTHUMG00000086724.1"; havana_transcript "OTTHUMT00000195005.1";
chr21	HAVANA	transcript	41123099	41160115	.	+	.	gene_id "ENSG00000183067.5"; transcript_id "ENST00000479378.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGSF5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "IGSF5-002"; level 2; havana_gene "OTTHUMG00000086724.1"; havana_transcript "OTTHUMT00000195006.1";
chr21	HAVANA	transcript	41163557	41173362	.	+	.	gene_id "ENSG00000183067.5"; transcript_id "ENST00000459922.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "IGSF5"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "IGSF5-003"; level 2; havana_gene "OTTHUMG00000086724.1"; havana_transcript "OTTHUMT00000195007.1";
chr21	HAVANA	transcript	41239243	41301322	.	+	.	gene_id "ENSG00000183036.6"; transcript_id "ENST00000328619.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCP4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PCP4-001"; level 2; tag "CCDS"; ccdsid "CCDS33563.1"; havana_gene "OTTHUMG00000086731.3"; havana_transcript "OTTHUMT00000195025.1";
chr21	HAVANA	transcript	41239365	41301322	.	+	.	gene_id "ENSG00000183036.6"; transcript_id "ENST00000462224.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCP4"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PCP4-002"; level 2; havana_gene "OTTHUMG00000086731.3"; havana_transcript "OTTHUMT00000195026.3";
chr21	HAVANA	transcript	41239377	41301322	.	+	.	gene_id "ENSG00000183036.6"; transcript_id "ENST00000468717.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCP4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PCP4-004"; level 2; havana_gene "OTTHUMG00000086731.3"; havana_transcript "OTTHUMT00000195028.1";
chr21	HAVANA	transcript	41270401	41301322	.	+	.	gene_id "ENSG00000183036.6"; transcript_id "ENST00000467565.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCP4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PCP4-003"; level 2; havana_gene "OTTHUMG00000086731.3"; havana_transcript "OTTHUMT00000195027.1";
chr21	HAVANA	transcript	41382926	42219065	.	-	.	gene_id "ENSG00000171587.10"; transcript_id "ENST00000400454.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCAM"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DSCAM-001"; level 2; tag "CCDS"; ccdsid "CCDS42929.1"; havana_gene "OTTHUMG00000086732.1"; havana_transcript "OTTHUMT00000195029.1";
chr21	HAVANA	transcript	41384828	41725581	.	-	.	gene_id "ENSG00000171587.10"; transcript_id "ENST00000404019.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DSCAM"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DSCAM-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086732.1"; havana_transcript "OTTHUMT00000195030.1";
chr21	HAVANA	transcript	41755010	41757285	.	+	.	gene_id "ENSG00000235123.1"; transcript_id "ENST00000455354.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF042090.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF042090.2-004"; level 2; havana_gene "OTTHUMG00000086733.1"; havana_transcript "OTTHUMT00000195034.1";
chr21	HAVANA	transcript	41755010	41757285	.	+	.	gene_id "ENSG00000235123.1"; transcript_id "ENST00000427451.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF042090.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF042090.2-001"; level 2; havana_gene "OTTHUMG00000086733.1"; havana_transcript "OTTHUMT00000195031.1";
chr21	HAVANA	transcript	41755010	41757285	.	+	.	gene_id "ENSG00000235123.1"; transcript_id "ENST00000422749.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF042090.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF042090.2-002"; level 2; havana_gene "OTTHUMG00000086733.1"; havana_transcript "OTTHUMT00000195032.1";
chr21	HAVANA	transcript	41755010	41757285	.	+	.	gene_id "ENSG00000235123.1"; transcript_id "ENST00000444046.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF042090.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF042090.2-003"; level 2; havana_gene "OTTHUMG00000086733.1"; havana_transcript "OTTHUMT00000195033.1";
chr21	ENSEMBL	transcript	41885071	41885206	.	+	.	gene_id "ENSG00000207147.1"; transcript_id "ENST00000384418.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA51.10"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA51.10-201"; level 3;
chr21	ENSEMBL	transcript	41949431	41949538	.	+	.	gene_id "ENSG00000221396.1"; transcript_id "ENST00000408469.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AF064863.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AF064863.1-201"; level 3;
chr21	HAVANA	transcript	41987304	42002693	.	-	.	gene_id "ENSG00000233756.1"; transcript_id "ENST00000441910.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF165176.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF165176.2-002"; level 2; havana_gene "OTTHUMG00000086730.1"; havana_transcript "OTTHUMT00000195024.1";
chr21	HAVANA	transcript	41990433	42002693	.	-	.	gene_id "ENSG00000233756.1"; transcript_id "ENST00000440363.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AF165176.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AF165176.2-001"; level 2; havana_gene "OTTHUMG00000086730.1"; havana_transcript "OTTHUMT00000195023.1";
chr21	ENSEMBL	transcript	42133675	42133745	.	+	.	gene_id "ENSG00000240448.1"; transcript_id "ENST00000482626.1"; gene_type "snoRNA_pseudogene"; gene_status "NOVEL"; gene_name "AF064866.1"; transcript_type "snoRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AF064866.1-201"; level 3;
chr21	HAVANA	transcript	42235920	42236399	.	+	.	gene_id "ENSG00000230859.1"; transcript_id "ENST00000456507.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AF043945.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AF043945.1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000154985.1"; havana_transcript "OTTHUMT00000337889.1";
chr21	HAVANA	transcript	42513427	42520060	.	-	.	gene_id "ENSG00000226496.1"; transcript_id "ENST00000441268.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf130"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf130-001"; level 2; havana_gene "OTTHUMG00000086741.1"; havana_transcript "OTTHUMT00000195053.1";
chr21	HAVANA	transcript	42515069	42519350	.	-	.	gene_id "ENSG00000226496.1"; transcript_id "ENST00000435493.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf130"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf130-002"; level 2; havana_gene "OTTHUMG00000086741.1"; havana_transcript "OTTHUMT00000195054.1";
chr21	HAVANA	transcript	42515107	42519360	.	-	.	gene_id "ENSG00000226496.1"; transcript_id "ENST00000446910.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf130"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf130-003"; level 2; havana_gene "OTTHUMG00000086741.1"; havana_transcript "OTTHUMT00000195055.1";
chr21	HAVANA	transcript	42539728	42648524	.	+	.	gene_id "ENSG00000182240.9"; transcript_id "ENST00000330333.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACE2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BACE2-001"; level 2; tag "CCDS"; ccdsid "CCDS13668.1"; havana_gene "OTTHUMG00000086742.1"; havana_transcript "OTTHUMT00000195056.1";
chr21	HAVANA	transcript	42539728	42648524	.	+	.	gene_id "ENSG00000182240.9"; transcript_id "ENST00000347667.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACE2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BACE2-002"; level 2; tag "CCDS"; ccdsid "CCDS13669.1"; havana_gene "OTTHUMG00000086742.1"; havana_transcript "OTTHUMT00000195057.1";
chr21	HAVANA	transcript	42539728	42648524	.	+	.	gene_id "ENSG00000182240.9"; transcript_id "ENST00000328735.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACE2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BACE2-003"; level 2; tag "CCDS"; ccdsid "CCDS13670.1"; havana_gene "OTTHUMG00000086742.1"; havana_transcript "OTTHUMT00000195058.1";
chr21	ENSEMBL	transcript	42540055	42647749	.	+	.	gene_id "ENSG00000182240.9"; transcript_id "ENST00000544566.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACE2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "BACE2-201"; level 3; havana_gene "OTTHUMG00000086742.1";
chr21	HAVANA	transcript	42597403	42613766	.	+	.	gene_id "ENSG00000182240.9"; transcript_id "ENST00000470864.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACE2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BACE2-005"; level 2; havana_gene "OTTHUMG00000086742.1"; havana_transcript "OTTHUMT00000195060.1";
chr21	HAVANA	transcript	42598193	42647308	.	+	.	gene_id "ENSG00000182240.9"; transcript_id "ENST00000487994.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACE2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BACE2-007"; level 2; havana_gene "OTTHUMG00000086742.1"; havana_transcript "OTTHUMT00000195062.1";
chr21	HAVANA	transcript	42598230	42618198	.	+	.	gene_id "ENSG00000182240.9"; transcript_id "ENST00000491838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACE2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "BACE2-009"; level 2; havana_gene "OTTHUMG00000086742.1"; havana_transcript "OTTHUMT00000195064.1";
chr21	HAVANA	transcript	42602045	42648524	.	+	.	gene_id "ENSG00000182240.9"; transcript_id "ENST00000466122.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACE2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BACE2-004"; level 2; havana_gene "OTTHUMG00000086742.1"; havana_transcript "OTTHUMT00000195059.1";
chr21	HAVANA	transcript	42608555	42629253	.	+	.	gene_id "ENSG00000182240.9"; transcript_id "ENST00000465326.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACE2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BACE2-006"; level 2; havana_gene "OTTHUMG00000086742.1"; havana_transcript "OTTHUMT00000195061.1";
chr21	HAVANA	transcript	42613672	42647551	.	+	.	gene_id "ENSG00000182240.9"; transcript_id "ENST00000463674.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACE2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BACE2-008"; level 2; havana_gene "OTTHUMG00000086742.1"; havana_transcript "OTTHUMT00000195063.1";
chr21	HAVANA	transcript	42624392	42629253	.	+	.	gene_id "ENSG00000182240.9"; transcript_id "ENST00000475618.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "BACE2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BACE2-010"; level 2; havana_gene "OTTHUMG00000086742.1"; havana_transcript "OTTHUMT00000195065.1";
chr21	HAVANA	transcript	42548249	42558700	.	-	.	gene_id "ENSG00000225745.4"; transcript_id "ENST00000430327.2"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL773572.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL773572.7-003"; level 2; havana_gene "OTTHUMG00000086744.2"; havana_transcript "OTTHUMT00000368755.1";
chr21	HAVANA	transcript	42548373	42558715	.	-	.	gene_id "ENSG00000225745.4"; transcript_id "ENST00000440221.2"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL773572.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL773572.7-001"; level 2; havana_gene "OTTHUMG00000086744.2"; havana_transcript "OTTHUMT00000195067.2";
chr21	ENSEMBL	transcript	42551350	42558269	.	-	.	gene_id "ENSG00000225745.4"; transcript_id "ENST00000536486.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL773572.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL773572.7-201"; level 3; havana_gene "OTTHUMG00000086744.2";
chr21	HAVANA	transcript	42552459	42558247	.	-	.	gene_id "ENSG00000225745.4"; transcript_id "ENST00000414699.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL773572.7"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL773572.7-002"; level 2; havana_gene "OTTHUMG00000086744.2"; havana_transcript "OTTHUMT00000368754.1";
chr21	ENSEMBL	transcript	42548791	42557166	.	-	.	gene_id "ENSG00000257111.1"; transcript_id "ENST00000541048.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AL773572.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AL773572.1-201"; level 3;
chr21	HAVANA	transcript	42552024	42552553	.	+	.	gene_id "ENSG00000224388.1"; transcript_id "ENST00000433378.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "NCRNA00228"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "NCRNA00228-001"; level 2; havana_gene "OTTHUMG00000086745.1"; havana_transcript "OTTHUMT00000195068.1";
chr21	HAVANA	transcript	42676139	42729358	.	+	.	gene_id "ENSG00000183844.12"; transcript_id "ENST00000479810.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM3B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM3B-002"; level 2; havana_gene "OTTHUMG00000086752.2"; havana_transcript "OTTHUMT00000195143.2";
chr21	HAVANA	transcript	42676177	42718276	.	+	.	gene_id "ENSG00000183844.12"; transcript_id "ENST00000518236.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM3B"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FAM3B-006"; level 2; havana_gene "OTTHUMG00000086752.2"; havana_transcript "OTTHUMT00000377735.1";
chr21	HAVANA	transcript	42688661	42729358	.	+	.	gene_id "ENSG00000183844.12"; transcript_id "ENST00000357985.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM3B-001"; level 2; tag "CCDS"; ccdsid "CCDS13671.1"; havana_gene "OTTHUMG00000086752.2"; havana_transcript "OTTHUMT00000195142.1";
chr21	HAVANA	transcript	42688741	42729358	.	+	.	gene_id "ENSG00000183844.12"; transcript_id "ENST00000398652.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM3B"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "FAM3B-003"; level 2; havana_gene "OTTHUMG00000086752.2"; havana_transcript "OTTHUMT00000195144.1";
chr21	HAVANA	transcript	42688741	42729358	.	+	.	gene_id "ENSG00000183844.12"; transcript_id "ENST00000398647.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM3B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FAM3B-004"; level 2; tag "CCDS"; ccdsid "CCDS42930.1"; havana_gene "OTTHUMG00000086752.2"; havana_transcript "OTTHUMT00000195145.1";
chr21	HAVANA	transcript	42694747	42729358	.	+	.	gene_id "ENSG00000183844.12"; transcript_id "ENST00000398646.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM3B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "FAM3B-005"; level 2; havana_gene "OTTHUMG00000086752.2"; havana_transcript "OTTHUMT00000195146.1";
chr21	HAVANA	transcript	42733870	42780870	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000330714.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX2-001"; level 2; tag "CCDS"; ccdsid "CCDS13672.1"; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195147.1";
chr21	HAVANA	transcript	42733926	42749854	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000436410.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX2-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195152.1";
chr21	HAVANA	transcript	42733934	42749843	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000435611.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX2-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195153.1";
chr21	HAVANA	transcript	42733954	42736593	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000494252.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MX2-010"; level 2; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195156.1";
chr21	HAVANA	transcript	42733957	42739233	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000495892.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MX2-013"; level 2; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195159.1";
chr21	ENSEMBL	transcript	42742012	42770869	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000543692.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX2-201"; level 3; havana_gene "OTTHUMG00000086753.2";
chr21	HAVANA	transcript	42742140	42748876	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000416447.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX2-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195155.1";
chr21	HAVANA	transcript	42742441	42749867	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000418103.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX2-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195154.1";
chr21	HAVANA	transcript	42761470	42781317	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000482953.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MX2-002"; level 2; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195148.1";
chr21	HAVANA	transcript	42762578	42774127	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000496774.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MX2-011"; level 2; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195157.1";
chr21	HAVANA	transcript	42769558	42771693	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000493753.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MX2-012"; level 2; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195158.1";
chr21	HAVANA	transcript	42770912	42779953	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000481838.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MX2-003"; level 2; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195149.1";
chr21	HAVANA	transcript	42772792	42776800	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000474368.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MX2-004"; level 2; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195150.1";
chr21	HAVANA	transcript	42774561	42780870	.	+	.	gene_id "ENSG00000183486.6"; transcript_id "ENST00000398632.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MX2-005"; level 2; havana_gene "OTTHUMG00000086753.2"; havana_transcript "OTTHUMT00000195151.1";
chr21	HAVANA	transcript	42792231	42799793	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000490220.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MX1-005"; level 2; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195165.1";
chr21	HAVANA	transcript	42792293	42795204	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000468506.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MX1-006"; level 2; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195166.1";
chr21	HAVANA	transcript	42792442	42831141	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000398600.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX1-001"; level 2; tag "CCDS"; ccdsid "CCDS13673.1"; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195161.2";
chr21	HAVANA	transcript	42793256	42807862	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000413778.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX1-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195167.1";
chr21	HAVANA	transcript	42797958	42804074	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000419044.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX1-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195168.1";
chr21	HAVANA	transcript	42798094	42831141	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000398598.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX1-002"; level 2; tag "CCDS"; ccdsid "CCDS13673.1"; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195162.1";
chr21	ENSEMBL	transcript	42798103	42831138	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000455164.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX1-201"; level 3; tag "CCDS"; ccdsid "CCDS13673.1"; havana_gene "OTTHUMG00000086755.5";
chr21	HAVANA	transcript	42798105	42811775	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000424365.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX1-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195169.5";
chr21	HAVANA	transcript	42798119	42799997	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000484465.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MX1-011"; level 2; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195171.1";
chr21	HAVANA	transcript	42798132	42812826	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000417963.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX1-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195170.1";
chr21	HAVANA	transcript	42798168	42807891	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000441677.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX1-012"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195172.1";
chr21	HAVANA	transcript	42798197	42801848	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000478268.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MX1-004"; level 2; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195164.1";
chr21	HAVANA	transcript	42801408	42804102	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000427464.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MX1-013"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195173.5";
chr21	HAVANA	transcript	42803641	42831141	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000288383.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "MX1-003"; level 2; tag "non_canonical_TEC"; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195163.1";
chr21	HAVANA	transcript	42815406	42817413	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000467510.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MX1-014"; level 2; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195174.1";
chr21	HAVANA	transcript	42817397	42821712	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000486275.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MX1-015"; level 2; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195175.1";
chr21	HAVANA	transcript	42822855	42824747	.	+	.	gene_id "ENSG00000157601.9"; transcript_id "ENST00000491110.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MX1-016"; level 2; havana_gene "OTTHUMG00000086755.5"; havana_transcript "OTTHUMT00000195176.1";
chr21	HAVANA	transcript	42813321	42814669	.	-	.	gene_id "ENSG00000228318.1"; transcript_id "ENST00000411427.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001610.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001610.5-001"; level 2; havana_gene "OTTHUMG00000086754.1"; havana_transcript "OTTHUMT00000195160.1";
chr21	HAVANA	transcript	42836478	42880086	.	-	.	gene_id "ENSG00000184012.7"; transcript_id "ENST00000332149.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMPRSS2-001"; level 2; tag "CCDS"; ccdsid "CCDS33564.1"; havana_gene "OTTHUMG00000086762.5"; havana_transcript "OTTHUMT00000195189.1";
chr21	ENSEMBL	transcript	42836480	42879992	.	-	.	gene_id "ENSG00000184012.7"; transcript_id "ENST00000398585.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMPRSS2-201"; level 3; havana_gene "OTTHUMG00000086762.5";
chr21	HAVANA	transcript	42837817	42840029	.	-	.	gene_id "ENSG00000184012.7"; transcript_id "ENST00000488556.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMPRSS2-006"; level 2; havana_gene "OTTHUMG00000086762.5"; havana_transcript "OTTHUMT00000195194.1";
chr21	HAVANA	transcript	42837936	42879909	.	-	.	gene_id "ENSG00000184012.7"; transcript_id "ENST00000458356.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMPRSS2-009"; level 2; tag "CCDS"; ccdsid "CCDS33564.1"; havana_gene "OTTHUMG00000086762.5"; havana_transcript "OTTHUMT00000339862.1";
chr21	HAVANA	transcript	42839661	42903043	.	-	.	gene_id "ENSG00000184012.7"; transcript_id "ENST00000454499.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMPRSS2-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086762.5"; havana_transcript "OTTHUMT00000339861.4";
chr21	HAVANA	transcript	42839693	42840764	.	-	.	gene_id "ENSG00000184012.7"; transcript_id "ENST00000469395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMPRSS2-005"; level 2; havana_gene "OTTHUMG00000086762.5"; havana_transcript "OTTHUMT00000195193.1";
chr21	HAVANA	transcript	42845373	42880019	.	-	.	gene_id "ENSG00000184012.7"; transcript_id "ENST00000424093.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TMPRSS2-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086762.5"; havana_transcript "OTTHUMT00000195191.1";
chr21	HAVANA	transcript	42858394	42880085	.	-	.	gene_id "ENSG00000184012.7"; transcript_id "ENST00000497881.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TMPRSS2-002"; level 2; tag "non_canonical_TEC"; havana_gene "OTTHUMG00000086762.5"; havana_transcript "OTTHUMT00000195190.1";
chr21	HAVANA	transcript	42860416	42880041	.	-	.	gene_id "ENSG00000184012.7"; transcript_id "ENST00000463138.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMPRSS2-004"; level 2; havana_gene "OTTHUMG00000086762.5"; havana_transcript "OTTHUMT00000195192.1";
chr21	HAVANA	transcript	42866283	42878531	.	-	.	gene_id "ENSG00000184012.7"; transcript_id "ENST00000455813.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMPRSS2-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086762.5"; havana_transcript "OTTHUMT00000339863.4";
chr21	HAVANA	transcript	42901716	42903025	.	-	.	gene_id "ENSG00000184012.7"; transcript_id "ENST00000489201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMPRSS2-011"; level 2; tag "mRNA_end_NF"; havana_gene "OTTHUMG00000086762.5"; havana_transcript "OTTHUMT00000339864.1";
chr21	ENSEMBL	transcript	42911133	42911253	.	+	.	gene_id "ENSG00000207503.1"; transcript_id "ENST00000384772.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA32.3"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA32.3-201"; level 3;
chr21	HAVANA	transcript	42931052	42934885	.	-	.	gene_id "ENSG00000232806.1"; transcript_id "ENST00000415820.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001610.9"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001610.9-001"; level 2; havana_gene "OTTHUMG00000086761.1"; havana_transcript "OTTHUMT00000195188.1";
chr21	HAVANA	transcript	42948062	42953246	.	-	.	gene_id "ENSG00000223400.1"; transcript_id "ENST00000418874.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP006748.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP006748.1-001"; level 2; havana_gene "OTTHUMG00000086763.1"; havana_transcript "OTTHUMT00000195196.1";
chr21	ENSEMBL	transcript	43024746	43024843	.	-	.	gene_id "ENSG00000252771.1"; transcript_id "ENST00000516962.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "snoU13.465"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "snoU13.465-201"; level 3;
chr21	HAVANA	transcript	43099341	43117496	.	+	.	gene_id "ENSG00000227702.1"; transcript_id "ENST00000413718.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00111"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00111-001"; level 2; havana_gene "OTTHUMG00000086772.1"; havana_transcript "OTTHUMT00000195206.1";
chr21	HAVANA	transcript	43131680	43135935	.	-	.	gene_id "ENSG00000236384.2"; transcript_id "ENST00000412102.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "C21orf129"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf129-001"; level 2; havana_gene "OTTHUMG00000086773.4"; havana_transcript "OTTHUMT00000195207.3";
chr21	HAVANA	transcript	43132317	43134215	.	-	.	gene_id "ENSG00000236384.2"; transcript_id "ENST00000457881.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "C21orf129"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf129-002"; level 2; havana_gene "OTTHUMG00000086773.4"; havana_transcript "OTTHUMT00000195208.2";
chr21	HAVANA	transcript	43136596	43137740	.	+	.	gene_id "ENSG00000232401.1"; transcript_id "ENST00000432830.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00112"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00112-001"; level 2; havana_gene "OTTHUMG00000086769.1"; havana_transcript "OTTHUMT00000195203.1";
chr21	HAVANA	transcript	43159529	43187266	.	-	.	gene_id "ENSG00000183421.6"; transcript_id "ENST00000332512.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIPK4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIPK4-001"; level 2; tag "CCDS"; ccdsid "CCDS13675.1"; havana_gene "OTTHUMG00000086770.1"; havana_transcript "OTTHUMT00000195204.1";
chr21	ENSEMBL	transcript	43159545	43187266	.	-	.	gene_id "ENSG00000183421.6"; transcript_id "ENST00000352483.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIPK4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIPK4-202"; level 3; havana_gene "OTTHUMG00000086770.1";
chr21	ENSEMBL	transcript	43160763	43186352	.	-	.	gene_id "ENSG00000183421.6"; transcript_id "ENST00000544709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIPK4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIPK4-204"; level 3; havana_gene "OTTHUMG00000086770.1";
chr21	ENSEMBL	transcript	43160763	43186118	.	-	.	gene_id "ENSG00000183421.6"; transcript_id "ENST00000542057.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIPK4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIPK4-203"; level 3; havana_gene "OTTHUMG00000086770.1";
chr21	ENSEMBL	transcript	43161354	43187266	.	-	.	gene_id "ENSG00000183421.6"; transcript_id "ENST00000330470.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RIPK4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RIPK4-201"; level 3; havana_gene "OTTHUMG00000086770.1";
chr21	HAVANA	transcript	43159533	43161468	.	+	.	gene_id "ENSG00000236883.1"; transcript_id "ENST00000423276.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001615.9"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001615.9-001"; level 2; havana_gene "OTTHUMG00000086771.1"; havana_transcript "OTTHUMT00000195205.1";
chr21	HAVANA	transcript	43218385	43230822	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000470586.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PRDM15-004"; level 2; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000195234.1";
chr21	HAVANA	transcript	43218385	43235318	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000486812.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRDM15-003"; level 2; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000195233.1";
chr21	HAVANA	transcript	43218385	43283411	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000447016.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRDM15-002"; level 2; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000195232.3";
chr21	HAVANA	transcript	43218385	43299582	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000422911.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PRDM15-010"; level 2; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000195240.4";
chr21	HAVANA	transcript	43218385	43299582	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000441787.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRDM15-015"; level 2; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000339825.1";
chr21	HAVANA	transcript	43218385	43299582	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000449395.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRDM15-016"; level 2; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000339826.1";
chr21	HAVANA	transcript	43218385	43299582	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000398548.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRDM15-018"; level 2; tag "CCDS"; ccdsid "CCDS42932.1"; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000339836.1";
chr21	HAVANA	transcript	43218385	43299591	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000433067.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PRDM15-001"; level 2; tag "CCDS"; ccdsid "CCDS13676.1"; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000195231.3";
chr21	ENSEMBL	transcript	43218387	43299582	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000538201.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRDM15-204"; level 3; havana_gene "OTTHUMG00000086781.7";
chr21	ENSEMBL	transcript	43218387	43280487	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000447207.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRDM15-203"; level 3; havana_gene "OTTHUMG00000086781.7";
chr21	ENSEMBL	transcript	43221325	43299591	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000269844.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRDM15-201"; level 3; tag "CCDS"; ccdsid "CCDS13676.1"; havana_gene "OTTHUMG00000086781.7";
chr21	HAVANA	transcript	43221788	43223278	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000465955.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PRDM15-014"; level 2; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000195244.1";
chr21	HAVANA	transcript	43221817	43224883	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000477633.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PRDM15-013"; level 2; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000195243.1";
chr21	HAVANA	transcript	43223054	43240139	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000495217.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PRDM15-012"; level 2; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000195242.1";
chr21	HAVANA	transcript	43241547	43255627	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000491486.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRDM15-011"; level 2; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000195241.1";
chr21	ENSEMBL	transcript	43243551	43299591	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000380489.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRDM15-202"; level 3; havana_gene "OTTHUMG00000086781.7";
chr21	HAVANA	transcript	43246333	43257003	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000489661.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRDM15-009"; level 2; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000195239.1";
chr21	HAVANA	transcript	43248677	43257041	.	-	.	gene_id "ENSG00000141956.8"; transcript_id "ENST00000496124.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRDM15"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRDM15-008"; level 2; havana_gene "OTTHUMG00000086781.7"; havana_transcript "OTTHUMT00000195238.1";
chr21	ENSEMBL	transcript	43218387	43230831	.	-	.	gene_id "ENSG00000256132.1"; transcript_id "ENST00000541429.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AB126081.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AB126081.1-201"; level 3;
chr21	HAVANA	transcript	43290742	43292163	.	+	.	gene_id "ENSG00000236545.1"; transcript_id "ENST00000458654.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001619.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001619.3-001"; level 2; havana_gene "OTTHUMG00000086778.1"; havana_transcript "OTTHUMT00000195227.1";
chr21	HAVANA	transcript	43294865	43297722	.	-	.	gene_id "ENSG00000227698.1"; transcript_id "ENST00000432411.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001619.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001619.2-001"; level 2; havana_gene "OTTHUMG00000086780.1"; havana_transcript "OTTHUMT00000195230.1";
chr21	ENSEMBL	transcript	43302314	43302409	.	+	.	gene_id "ENSG00000251778.1"; transcript_id "ENST00000515969.1"; gene_type "snoRNA"; gene_status "NOVEL"; gene_name "SNORA3.5"; transcript_type "snoRNA"; transcript_status "NOVEL"; transcript_name "SNORA3.5-201"; level 3;
chr21	HAVANA	transcript	43305221	43321761	.	-	.	gene_id "ENSG00000157617.12"; transcript_id "ENST00000449165.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C2CD2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C2CD2-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086779.4"; havana_transcript "OTTHUMT00000195272.1";
chr21	HAVANA	transcript	43305221	43346799	.	-	.	gene_id "ENSG00000157617.12"; transcript_id "ENST00000329623.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C2CD2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C2CD2-002"; level 2; tag "CCDS"; ccdsid "CCDS13677.1"; havana_gene "OTTHUMG00000086779.4"; havana_transcript "OTTHUMT00000195229.2";
chr21	HAVANA	transcript	43305221	43373999	.	-	.	gene_id "ENSG00000157617.12"; transcript_id "ENST00000380486.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C2CD2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C2CD2-001"; level 2; tag "CCDS"; ccdsid "CCDS42933.1"; havana_gene "OTTHUMG00000086779.4"; havana_transcript "OTTHUMT00000195228.2";
chr21	HAVANA	transcript	43306782	43328911	.	-	.	gene_id "ENSG00000157617.12"; transcript_id "ENST00000482186.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C2CD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C2CD2-005"; level 2; havana_gene "OTTHUMG00000086779.4"; havana_transcript "OTTHUMT00000195271.1";
chr21	HAVANA	transcript	43306782	43339142	.	-	.	gene_id "ENSG00000157617.12"; transcript_id "ENST00000482084.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C2CD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C2CD2-004"; level 2; havana_gene "OTTHUMG00000086779.4"; havana_transcript "OTTHUMT00000195270.1";
chr21	HAVANA	transcript	43321062	43346781	.	-	.	gene_id "ENSG00000157617.12"; transcript_id "ENST00000467074.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C2CD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C2CD2-010"; level 2; havana_gene "OTTHUMG00000086779.4"; havana_transcript "OTTHUMT00000401050.1";
chr21	HAVANA	transcript	43332269	43362269	.	-	.	gene_id "ENSG00000157617.12"; transcript_id "ENST00000490479.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C2CD2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C2CD2-007"; level 2; havana_gene "OTTHUMG00000086779.4"; havana_transcript "OTTHUMT00000195273.1";
chr21	HAVANA	transcript	43373055	43373628	.	-	.	gene_id "ENSG00000157617.12"; transcript_id "ENST00000478372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C2CD2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C2CD2-009"; level 2; havana_gene "OTTHUMG00000086779.4"; havana_transcript "OTTHUMT00000195275.1";
chr21	ENSEMBL	transcript	43313829	43315499	.	-	.	gene_id "ENSG00000215494.1"; transcript_id "ENST00000400449.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP001619.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP001619.1-201"; level 3;
chr21	HAVANA	transcript	43406940	43430466	.	-	.	gene_id "ENSG00000173276.9"; transcript_id "ENST00000398505.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF295"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ZNF295-004"; level 2; tag "CCDS"; ccdsid "CCDS42934.1"; havana_gene "OTTHUMG00000086789.1"; havana_transcript "OTTHUMT00000195307.1";
chr21	HAVANA	transcript	43406940	43430466	.	-	.	gene_id "ENSG00000173276.9"; transcript_id "ENST00000310826.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF295"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF295-005"; level 2; tag "CCDS"; ccdsid "CCDS13678.1"; havana_gene "OTTHUMG00000086789.1"; havana_transcript "OTTHUMT00000195308.1";
chr21	HAVANA	transcript	43408746	43430475	.	-	.	gene_id "ENSG00000173276.9"; transcript_id "ENST00000398499.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF295"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF295-001"; level 2; tag "CCDS"; ccdsid "CCDS13678.1"; havana_gene "OTTHUMG00000086789.1"; havana_transcript "OTTHUMT00000195304.1";
chr21	HAVANA	transcript	43408746	43430496	.	-	.	gene_id "ENSG00000173276.9"; transcript_id "ENST00000398511.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF295"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF295-002"; level 2; tag "CCDS"; ccdsid "CCDS13678.1"; havana_gene "OTTHUMG00000086789.1"; havana_transcript "OTTHUMT00000195305.1";
chr21	HAVANA	transcript	43411515	43430442	.	-	.	gene_id "ENSG00000173276.9"; transcript_id "ENST00000465968.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF295"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ZNF295-007"; level 2; havana_gene "OTTHUMG00000086789.1"; havana_transcript "OTTHUMT00000195310.1";
chr21	HAVANA	transcript	43413849	43428166	.	-	.	gene_id "ENSG00000173276.9"; transcript_id "ENST00000425521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF295"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF295-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086789.1"; havana_transcript "OTTHUMT00000195311.1";
chr21	HAVANA	transcript	43414057	43430466	.	-	.	gene_id "ENSG00000173276.9"; transcript_id "ENST00000449949.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF295"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF295-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086789.1"; havana_transcript "OTTHUMT00000195306.1";
chr21	HAVANA	transcript	43414057	43430475	.	-	.	gene_id "ENSG00000173276.9"; transcript_id "ENST00000398497.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ZNF295"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ZNF295-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086789.1"; havana_transcript "OTTHUMT00000195309.1";
chr21	HAVANA	transcript	43429303	43444975	.	+	.	gene_id "ENSG00000237232.2"; transcript_id "ENST00000412906.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf121"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf121-001"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000086787.2"; havana_transcript "OTTHUMT00000195288.2";
chr21	HAVANA	transcript	43442132	43444975	.	+	.	gene_id "ENSG00000237232.2"; transcript_id "ENST00000455701.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf121"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf121-003"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000086787.2"; havana_transcript "OTTHUMT00000195290.2";
chr21	HAVANA	transcript	43442376	43445033	.	+	.	gene_id "ENSG00000237232.2"; transcript_id "ENST00000429739.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf121"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf121-002"; level 2; tag "non_canonical_polymorphism"; havana_gene "OTTHUMG00000086787.2"; havana_transcript "OTTHUMT00000195289.2";
chr21	HAVANA	transcript	43483068	43563105	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000400427.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UMODL1-003"; level 2; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195293.2";
chr21	HAVANA	transcript	43483068	43563105	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000400424.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UMODL1-004"; level 2; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195294.1";
chr21	HAVANA	transcript	43491426	43563105	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000408989.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UMODL1-001"; level 2; tag "CCDS"; ccdsid "CCDS42935.1"; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195291.2";
chr21	HAVANA	transcript	43491426	43563105	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000408910.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UMODL1-002"; level 2; tag "CCDS"; ccdsid "CCDS42936.1"; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195292.2";
chr21	ENSEMBL	transcript	43491426	43521852	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000380462.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UMODL1-201"; level 3; havana_gene "OTTHUMG00000086788.2";
chr21	ENSEMBL	transcript	43491426	43514066	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000400417.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UMODL1-202"; level 3; havana_gene "OTTHUMG00000086788.2";
chr21	HAVANA	transcript	43505413	43524167	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000491559.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UMODL1-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195295.2";
chr21	HAVANA	transcript	43505413	43524167	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000468982.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UMODL1-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195296.2";
chr21	HAVANA	transcript	43505413	43524167	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000497243.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UMODL1-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195297.2";
chr21	HAVANA	transcript	43505413	43524167	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000400421.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UMODL1-008"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195298.2";
chr21	HAVANA	transcript	43505413	43524167	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000466434.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UMODL1-009"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195299.2";
chr21	HAVANA	transcript	43505413	43524167	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000485357.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UMODL1-010"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195300.2";
chr21	ENSEMBL	transcript	43505413	43524167	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000423139.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UMODL1-203"; level 3; havana_gene "OTTHUMG00000086788.2";
chr21	HAVANA	transcript	43531507	43536044	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000475047.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UMODL1-011"; level 2; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195301.1";
chr21	HAVANA	transcript	43540629	43546506	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000484174.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UMODL1-014"; level 2; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000354255.1";
chr21	HAVANA	transcript	43540629	43563105	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000400423.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UMODL1-012"; level 2; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195302.1";
chr21	ENSEMBL	transcript	43541266	43548179	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000434156.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UMODL1-204"; level 3; havana_gene "OTTHUMG00000086788.2";
chr21	HAVANA	transcript	43547788	43557741	.	+	.	gene_id "ENSG00000177398.12"; transcript_id "ENST00000484712.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UMODL1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UMODL1-013"; level 2; havana_gene "OTTHUMG00000086788.2"; havana_transcript "OTTHUMT00000195303.1";
chr21	HAVANA	transcript	43522244	43528644	.	-	.	gene_id "ENSG00000184385.2"; transcript_id "ENST00000329015.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf128"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf128-001"; level 2; havana_gene "OTTHUMG00000086790.2"; havana_transcript "OTTHUMT00000195312.2";
chr21	HAVANA	transcript	43619799	43717354	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000398457.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ABCG1-002"; level 2; tag "CCDS"; ccdsid "CCDS42937.1"; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000195314.1";
chr21	HAVANA	transcript	43619922	43717354	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000462050.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ABCG1-003"; level 2; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000195315.1";
chr21	HAVANA	transcript	43636187	43717354	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000347800.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ABCG1-004"; level 2; tag "CCDS"; ccdsid "CCDS13681.1"; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000195316.1";
chr21	HAVANA	transcript	43639227	43704758	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000450121.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ABCG1-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000195322.1";
chr21	HAVANA	transcript	43639228	43717354	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000398449.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ABCG1-001"; level 2; tag "CCDS"; ccdsid "CCDS42938.1"; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000195313.2";
chr21	HAVANA	transcript	43639228	43717354	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000361802.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ABCG1-006"; level 2; tag "CCDS"; ccdsid "CCDS13682.1"; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000195318.2";
chr21	HAVANA	transcript	43639931	43717354	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000343687.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ABCG1-005"; level 2; tag "CCDS"; ccdsid "CCDS13683.1"; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000195317.1";
chr21	HAVANA	transcript	43676194	43717354	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000398437.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ABCG1-008"; level 2; tag "non_canonical_TEC"; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000195320.1";
chr21	ENSEMBL	transcript	43676459	43717352	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000340588.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ABCG1-201"; level 3; havana_gene "OTTHUMG00000086791.3";
chr21	HAVANA	transcript	43696454	43717354	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000472587.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ABCG1-007"; level 2; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000195319.1";
chr21	HAVANA	transcript	43696796	43706251	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000467818.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ABCG1-011"; level 2; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000195323.1";
chr21	HAVANA	transcript	43704730	43720714	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000489035.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ABCG1-012"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000329206.1";
chr21	HAVANA	transcript	43704730	43720714	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000469119.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ABCG1-013"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000329207.1";
chr21	HAVANA	transcript	43704730	43720714	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000482161.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ABCG1-014"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000329208.1";
chr21	HAVANA	transcript	43706044	43715462	.	+	.	gene_id "ENSG00000160179.13"; transcript_id "ENST00000496783.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ABCG1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ABCG1-009"; level 2; havana_gene "OTTHUMG00000086791.3"; havana_transcript "OTTHUMT00000195321.1";
chr21	ENSEMBL	transcript	43641283	43641396	.	+	.	gene_id "ENSG00000223262.1"; transcript_id "ENST00000411330.1"; gene_type "rRNA"; gene_status "NOVEL"; gene_name "5S_rRNA.331"; transcript_type "rRNA"; transcript_status "NOVEL"; transcript_name "5S_rRNA.331-201"; level 3;
chr21	ENSEMBL	transcript	43720384	43720455	.	-	.	gene_id "ENSG00000216197.1"; transcript_id "ENST00000401378.1"; gene_type "miRNA"; gene_status "NOVEL"; gene_name "AP001623.1"; transcript_type "miRNA"; transcript_status "NOVEL"; transcript_name "AP001623.1-201"; level 3;
chr21	HAVANA	transcript	43731777	43735761	.	-	.	gene_id "ENSG00000160180.14"; transcript_id "ENST00000518498.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TFF3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TFF3-001"; level 2; havana_gene "OTTHUMG00000086798.4"; havana_transcript "OTTHUMT00000195358.2";
chr21	ENSEMBL	transcript	43731777	43735706	.	-	.	gene_id "ENSG00000160180.14"; transcript_id "ENST00000291525.10"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TFF3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TFF3-201"; level 3; tag "CCDS"; ccdsid "CCDS33565.1"; havana_gene "OTTHUMG00000086798.4";
chr21	HAVANA	transcript	43732163	43733796	.	-	.	gene_id "ENSG00000160180.14"; transcript_id "ENST00000489676.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TFF3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TFF3-003"; level 2; havana_gene "OTTHUMG00000086798.4"; havana_transcript "OTTHUMT00000195360.1";
chr21	HAVANA	transcript	43732163	43735446	.	-	.	gene_id "ENSG00000160180.14"; transcript_id "ENST00000398431.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TFF3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TFF3-002"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086798.4"; havana_transcript "OTTHUMT00000195359.1";
chr21	HAVANA	transcript	43766466	43771237	.	-	.	gene_id "ENSG00000160181.4"; transcript_id "ENST00000291526.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TFF2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TFF2-001"; level 2; tag "CCDS"; ccdsid "CCDS13684.1"; havana_gene "OTTHUMG00000086797.1"; havana_transcript "OTTHUMT00000195355.1";
chr21	HAVANA	transcript	43766483	43771106	.	-	.	gene_id "ENSG00000160181.4"; transcript_id "ENST00000463771.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TFF2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TFF2-003"; level 2; havana_gene "OTTHUMG00000086797.1"; havana_transcript "OTTHUMT00000195357.1";
chr21	HAVANA	transcript	43766531	43771103	.	-	.	gene_id "ENSG00000160181.4"; transcript_id "ENST00000475297.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TFF2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TFF2-002"; level 2; havana_gene "OTTHUMG00000086797.1"; havana_transcript "OTTHUMT00000195356.1";
chr21	HAVANA	transcript	43782391	43786703	.	-	.	gene_id "ENSG00000160182.2"; transcript_id "ENST00000291527.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TFF1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TFF1-001"; level 2; tag "CCDS"; ccdsid "CCDS13685.1"; havana_gene "OTTHUMG00000086799.1"; havana_transcript "OTTHUMT00000195361.1";
chr21	HAVANA	transcript	43791999	43816955	.	-	.	gene_id "ENSG00000160183.7"; transcript_id "ENST00000291532.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMPRSS3-001"; level 2; tag "CCDS"; ccdsid "CCDS13686.1"; havana_gene "OTTHUMG00000086796.2"; havana_transcript "OTTHUMT00000195347.1";
chr21	HAVANA	transcript	43791999	43816168	.	-	.	gene_id "ENSG00000160183.7"; transcript_id "ENST00000433957.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMPRSS3-002"; level 2; havana_gene "OTTHUMG00000086796.2"; havana_transcript "OTTHUMT00000195348.1";
chr21	HAVANA	transcript	43791999	43816052	.	-	.	gene_id "ENSG00000160183.7"; transcript_id "ENST00000398405.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TMPRSS3-004"; level 2; havana_gene "OTTHUMG00000086796.2"; havana_transcript "OTTHUMT00000195350.1";
chr21	HAVANA	transcript	43791999	43810527	.	-	.	gene_id "ENSG00000160183.7"; transcript_id "ENST00000482761.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMPRSS3-005"; level 2; havana_gene "OTTHUMG00000086796.2"; havana_transcript "OTTHUMT00000195351.1";
chr21	HAVANA	transcript	43791999	43809227	.	-	.	gene_id "ENSG00000160183.7"; transcript_id "ENST00000474596.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TMPRSS3-006"; level 2; havana_gene "OTTHUMG00000086796.2"; havana_transcript "OTTHUMT00000195352.1";
chr21	HAVANA	transcript	43791999	43803860	.	-	.	gene_id "ENSG00000160183.7"; transcript_id "ENST00000476848.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TMPRSS3-007"; level 2; havana_gene "OTTHUMG00000086796.2"; havana_transcript "OTTHUMT00000195353.1";
chr21	ENSEMBL	transcript	43792000	43816955	.	-	.	gene_id "ENSG00000160183.7"; transcript_id "ENST00000380399.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMPRSS3-201"; level 3; havana_gene "OTTHUMG00000086796.2";
chr21	HAVANA	transcript	43801985	43816200	.	-	.	gene_id "ENSG00000160183.7"; transcript_id "ENST00000398397.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TMPRSS3-003"; level 2; tag "CCDS"; ccdsid "CCDS42939.1"; havana_gene "OTTHUMG00000086796.2"; havana_transcript "OTTHUMT00000195349.1";
chr21	HAVANA	transcript	43801987	43802862	.	-	.	gene_id "ENSG00000160183.7"; transcript_id "ENST00000478680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TMPRSS3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TMPRSS3-008"; level 2; havana_gene "OTTHUMG00000086796.2"; havana_transcript "OTTHUMT00000195354.1";
chr21	HAVANA	transcript	43824008	43867353	.	+	.	gene_id "ENSG00000160185.9"; transcript_id "ENST00000291535.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBASH3A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBASH3A-002"; level 2; tag "CCDS"; ccdsid "CCDS33566.1"; havana_gene "OTTHUMG00000086805.1"; havana_transcript "OTTHUMT00000195383.1";
chr21	ENSEMBL	transcript	43824011	43830697	.	+	.	gene_id "ENSG00000160185.9"; transcript_id "ENST00000450356.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBASH3A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBASH3A-201"; level 3; havana_gene "OTTHUMG00000086805.1";
chr21	HAVANA	transcript	43824024	43867791	.	+	.	gene_id "ENSG00000160185.9"; transcript_id "ENST00000319294.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBASH3A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBASH3A-001"; level 2; tag "CCDS"; ccdsid "CCDS13687.1"; havana_gene "OTTHUMG00000086805.1"; havana_transcript "OTTHUMT00000195382.1";
chr21	HAVANA	transcript	43824026	43867353	.	+	.	gene_id "ENSG00000160185.9"; transcript_id "ENST00000398367.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBASH3A"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "UBASH3A-003"; level 2; havana_gene "OTTHUMG00000086805.1"; havana_transcript "OTTHUMT00000195384.1";
chr21	HAVANA	transcript	43824026	43867640	.	+	.	gene_id "ENSG00000160185.9"; transcript_id "ENST00000473381.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBASH3A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UBASH3A-004"; level 2; havana_gene "OTTHUMG00000086805.1"; havana_transcript "OTTHUMT00000195385.1";
chr21	ENSEMBL	transcript	43837606	43837702	.	-	.	gene_id "ENSG00000252619.1"; transcript_id "ENST00000516810.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.1202"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.1202-201"; level 3;
chr21	HAVANA	transcript	43892596	43916356	.	-	.	gene_id "ENSG00000160188.5"; transcript_id "ENST00000493019.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RSPH1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RSPH1-002"; level 2; havana_gene "OTTHUMG00000086804.1"; havana_transcript "OTTHUMT00000195380.1";
chr21	HAVANA	transcript	43892596	43916464	.	-	.	gene_id "ENSG00000160188.5"; transcript_id "ENST00000291536.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RSPH1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RSPH1-001"; level 2; tag "CCDS"; ccdsid "CCDS13688.1"; havana_gene "OTTHUMG00000086804.1"; havana_transcript "OTTHUMT00000195379.1";
chr21	HAVANA	transcript	43892807	43916296	.	-	.	gene_id "ENSG00000160188.5"; transcript_id "ENST00000398352.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RSPH1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "RSPH1-003"; level 2; havana_gene "OTTHUMG00000086804.1"; havana_transcript "OTTHUMT00000195381.1";
chr21	HAVANA	transcript	43916118	43918313	.	+	.	gene_id "ENSG00000239930.1"; transcript_id "ENST00000454800.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001625.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001625.4-001"; level 2; havana_gene "OTTHUMG00000086811.1"; havana_transcript "OTTHUMT00000195396.1";
chr21	HAVANA	transcript	43916649	43917553	.	+	.	gene_id "ENSG00000239930.1"; transcript_id "ENST00000416179.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001625.4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001625.4-002"; level 2; havana_gene "OTTHUMG00000086811.1"; havana_transcript "OTTHUMT00000195397.1";
chr21	HAVANA	transcript	43916128	43938620	.	+	.	gene_id "ENSG00000160190.8"; transcript_id "ENST00000419522.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC37A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC37A1-002"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086803.5"; havana_transcript "OTTHUMT00000195375.5";
chr21	HAVANA	transcript	43919742	44001550	.	+	.	gene_id "ENSG00000160190.8"; transcript_id "ENST00000398341.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC37A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC37A1-001"; level 2; tag "CCDS"; ccdsid "CCDS13689.1"; havana_gene "OTTHUMG00000086803.5"; havana_transcript "OTTHUMT00000195374.2";
chr21	HAVANA	transcript	43919817	43923084	.	+	.	gene_id "ENSG00000160190.8"; transcript_id "ENST00000484887.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC37A1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC37A1-006"; level 2; havana_gene "OTTHUMG00000086803.5"; havana_transcript "OTTHUMT00000195386.1";
chr21	HAVANA	transcript	43934002	43946148	.	+	.	gene_id "ENSG00000160190.8"; transcript_id "ENST00000471277.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC37A1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC37A1-003"; level 2; havana_gene "OTTHUMG00000086803.5"; havana_transcript "OTTHUMT00000195376.1";
chr21	HAVANA	transcript	43934024	44001550	.	+	.	gene_id "ENSG00000160190.8"; transcript_id "ENST00000352133.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC37A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC37A1-004"; level 2; tag "CCDS"; ccdsid "CCDS13689.1"; havana_gene "OTTHUMG00000086803.5"; havana_transcript "OTTHUMT00000195377.1";
chr21	HAVANA	transcript	43934634	43938620	.	+	.	gene_id "ENSG00000160190.8"; transcript_id "ENST00000398343.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC37A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC37A1-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086803.5"; havana_transcript "OTTHUMT00000195378.1";
chr21	HAVANA	transcript	43963627	43967827	.	+	.	gene_id "ENSG00000160190.8"; transcript_id "ENST00000487951.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC37A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SLC37A1-007"; level 2; havana_gene "OTTHUMG00000086803.5"; havana_transcript "OTTHUMT00000195387.1";
chr21	HAVANA	transcript	43985937	43996057	.	+	.	gene_id "ENSG00000160190.8"; transcript_id "ENST00000496416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC37A1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC37A1-008"; level 2; havana_gene "OTTHUMG00000086803.5"; havana_transcript "OTTHUMT00000195388.1";
chr21	HAVANA	transcript	43928734	43929771	.	+	.	gene_id "ENSG00000231867.1"; transcript_id "ENST00000429903.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001625.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001625.5-002"; level 2; havana_gene "OTTHUMG00000086812.1"; havana_transcript "OTTHUMT00000195399.1";
chr21	HAVANA	transcript	43928744	43929768	.	+	.	gene_id "ENSG00000231867.1"; transcript_id "ENST00000455116.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001625.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001625.5-001"; level 2; havana_gene "OTTHUMG00000086812.1"; havana_transcript "OTTHUMT00000195398.1";
chr21	HAVANA	transcript	43980484	43982044	.	-	.	gene_id "ENSG00000235772.1"; transcript_id "ENST00000442605.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001625.6"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001625.6-001"; level 2; havana_gene "OTTHUMG00000086815.1"; havana_transcript "OTTHUMT00000195402.1";
chr21	HAVANA	transcript	44019390	44035168	.	-	.	gene_id "ENSG00000225431.1"; transcript_id "ENST00000419628.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP001626.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001626.1-001"; level 2; havana_gene "OTTHUMG00000086813.1"; havana_transcript "OTTHUMT00000195400.1";
chr21	HAVANA	transcript	44068381	44071354	.	-	.	gene_id "ENSG00000235023.1"; transcript_id "ENST00000424890.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001626.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001626.2-001"; level 2; havana_gene "OTTHUMG00000086814.1"; havana_transcript "OTTHUMT00000195401.1";
chr21	HAVANA	transcript	44073746	44174174	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000460905.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-024"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195474.1";
chr21	HAVANA	transcript	44073859	44119148	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000472401.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-027"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195477.1";
chr21	HAVANA	transcript	44073860	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000335512.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-008"; level 2; tag "CCDS"; ccdsid "CCDS33568.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195458.1";
chr21	ENSEMBL	transcript	44073862	44195616	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000539837.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-201"; level 3; havana_gene "OTTHUMG00000086825.1";
chr21	HAVANA	transcript	44073865	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000470987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-002"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195452.1";
chr21	HAVANA	transcript	44073865	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000291539.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-016"; level 2; tag "CCDS"; ccdsid "CCDS13690.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195466.1";
chr21	HAVANA	transcript	44073865	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000490803.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-017"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195467.1";
chr21	HAVANA	transcript	44073889	44121299	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000486902.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-025"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195475.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000380328.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-001"; level 2; tag "CCDS"; ccdsid "CCDS33567.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195451.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000495521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-003"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195453.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000398232.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-006"; level 2; tag "CCDS"; ccdsid "CCDS42945.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195456.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000462571.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-007"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195457.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000398234.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-009"; level 2; tag "CCDS"; ccdsid "CCDS42943.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195459.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000398236.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-010"; level 2; tag "CCDS"; ccdsid "CCDS42941.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195460.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000468805.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-011"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195461.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000328862.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-012"; level 2; tag "CCDS"; ccdsid "CCDS33569.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195462.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000335440.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-013"; level 2; tag "CCDS"; ccdsid "CCDS33570.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195463.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000398225.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-014"; level 2; tag "CCDS"; ccdsid "CCDS42942.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195464.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000497805.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-015"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195465.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000398229.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-019"; level 2; tag "CCDS"; ccdsid "CCDS42944.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195469.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000398227.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-020"; level 2; tag "CCDS"; ccdsid "CCDS42947.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195470.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000460989.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-021"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195471.1";
chr21	HAVANA	transcript	44073889	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000467403.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-022"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195472.1";
chr21	HAVANA	transcript	44073923	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000349112.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-004"; level 2; tag "CCDS"; ccdsid "CCDS33571.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195454.1";
chr21	HAVANA	transcript	44073923	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000398224.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDE9A-005"; level 2; tag "CCDS"; ccdsid "CCDS42946.1"; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195455.1";
chr21	HAVANA	transcript	44106307	44182249	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000467162.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-026"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195476.1";
chr21	HAVANA	transcript	44151868	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000495343.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDE9A-018"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195468.1";
chr21	HAVANA	transcript	44176885	44195619	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000489319.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PDE9A-023"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195473.1";
chr21	HAVANA	transcript	44182324	44188522	.	+	.	gene_id "ENSG00000160191.13"; transcript_id "ENST00000466472.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDE9A"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PDE9A-028"; level 2; havana_gene "OTTHUMG00000086825.1"; havana_transcript "OTTHUMT00000195478.1";
chr21	HAVANA	transcript	44153704	44161868	.	-	.	gene_id "ENSG00000225731.1"; transcript_id "ENST00000437426.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001627.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001627.1-001"; level 2; havana_gene "OTTHUMG00000153501.1"; havana_transcript "OTTHUMT00000331386.1";
chr21	HAVANA	transcript	44201184	44202343	.	-	.	gene_id "ENSG00000233754.1"; transcript_id "ENST00000420273.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001628.7"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001628.7-001"; level 2; havana_gene "OTTHUMG00000086827.1"; havana_transcript "OTTHUMT00000195486.1";
chr21	HAVANA	transcript	44251150	44256587	.	-	.	gene_id "ENSG00000225218.1"; transcript_id "ENST00000431150.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001628.6"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001628.6-001"; level 2; havana_gene "OTTHUMG00000086824.1"; havana_transcript "OTTHUMT00000195450.1";
chr21	HAVANA	transcript	44263204	44299641	.	-	.	gene_id "ENSG00000160193.7"; transcript_id "ENST00000330317.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WDR4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "WDR4-004"; level 2; tag "CCDS"; ccdsid "CCDS13691.1"; havana_gene "OTTHUMG00000086826.1"; havana_transcript "OTTHUMT00000195482.1";
chr21	HAVANA	transcript	44269336	44299678	.	-	.	gene_id "ENSG00000160193.7"; transcript_id "ENST00000476326.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WDR4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "WDR4-002"; level 2; havana_gene "OTTHUMG00000086826.1"; havana_transcript "OTTHUMT00000195480.1";
chr21	HAVANA	transcript	44269336	44299385	.	-	.	gene_id "ENSG00000160193.7"; transcript_id "ENST00000492742.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WDR4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "WDR4-003"; level 2; havana_gene "OTTHUMG00000086826.1"; havana_transcript "OTTHUMT00000195481.1";
chr21	HAVANA	transcript	44269336	44299665	.	-	.	gene_id "ENSG00000160193.7"; transcript_id "ENST00000398208.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WDR4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "WDR4-001"; level 2; tag "CCDS"; ccdsid "CCDS13691.1"; havana_gene "OTTHUMG00000086826.1"; havana_transcript "OTTHUMT00000195479.1";
chr21	HAVANA	transcript	44274672	44299625	.	-	.	gene_id "ENSG00000160193.7"; transcript_id "ENST00000479429.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WDR4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "WDR4-007"; level 2; havana_gene "OTTHUMG00000086826.1"; havana_transcript "OTTHUMT00000195485.1";
chr21	HAVANA	transcript	44275794	44299656	.	-	.	gene_id "ENSG00000160193.7"; transcript_id "ENST00000463902.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WDR4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "WDR4-005"; level 2; havana_gene "OTTHUMG00000086826.1"; havana_transcript "OTTHUMT00000195483.1";
chr21	HAVANA	transcript	44282392	44299620	.	-	.	gene_id "ENSG00000160193.7"; transcript_id "ENST00000470658.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "WDR4"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "WDR4-006"; level 2; havana_gene "OTTHUMG00000086826.1"; havana_transcript "OTTHUMT00000195484.1";
chr21	HAVANA	transcript	44299754	44329215	.	+	.	gene_id "ENSG00000160194.10"; transcript_id "ENST00000460259.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NDUFV3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NDUFV3-001"; level 2; havana_gene "OTTHUMG00000086823.2"; havana_transcript "OTTHUMT00000195446.1";
chr21	HAVANA	transcript	44313375	44329215	.	+	.	gene_id "ENSG00000160194.10"; transcript_id "ENST00000354250.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NDUFV3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "NDUFV3-002"; level 2; tag "CCDS"; ccdsid "CCDS33572.1"; havana_gene "OTTHUMG00000086823.2"; havana_transcript "OTTHUMT00000195447.1";
chr21	HAVANA	transcript	44313378	44329783	.	+	.	gene_id "ENSG00000160194.10"; transcript_id "ENST00000340344.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NDUFV3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "NDUFV3-003"; level 2; tag "CCDS"; ccdsid "CCDS33573.1"; havana_gene "OTTHUMG00000086823.2"; havana_transcript "OTTHUMT00000195448.1";
chr21	HAVANA	transcript	44313431	44324041	.	+	.	gene_id "ENSG00000160194.10"; transcript_id "ENST00000460740.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NDUFV3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NDUFV3-004"; level 2; havana_gene "OTTHUMG00000086823.2"; havana_transcript "OTTHUMT00000195449.1";
chr21	ENSEMBL	transcript	44317035	44329772	.	+	.	gene_id "ENSG00000160194.10"; transcript_id "ENST00000398198.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NDUFV3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "NDUFV3-201"; level 3; havana_gene "OTTHUMG00000086823.2";
chr21	HAVANA	transcript	44317096	44427677	.	+	.	gene_id "ENSG00000160194.10"; transcript_id "ENST00000456957.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NDUFV3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "NDUFV3-005"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086823.2"; havana_transcript "OTTHUMT00000334504.1";
chr21	HAVANA	transcript	44317096	44427676	.	+	.	gene_id "ENSG00000160194.10"; transcript_id "ENST00000418336.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "NDUFV3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "NDUFV3-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086823.2"; havana_transcript "OTTHUMT00000334505.1";
chr21	HAVANA	transcript	44336913	44345756	.	-	.	gene_id "ENSG00000233056.1"; transcript_id "ENST00000447535.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf105"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf105-001"; level 2; havana_gene "OTTHUMG00000086835.1"; havana_transcript "OTTHUMT00000195540.1";
chr21	ENSEMBL	transcript	44373890	44376488	.	+	.	gene_id "ENSG00000248623.1"; transcript_id "ENST00000506728.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "AP001630.1"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AP001630.1-201"; level 3;
chr21	HAVANA	transcript	44384749	44385473	.	-	.	gene_id "ENSG00000224100.1"; transcript_id "ENST00000428410.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001630.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001630.5-001"; level 2; havana_gene "OTTHUMG00000086837.1"; havana_transcript "OTTHUMT00000195552.1";
chr21	HAVANA	transcript	44394620	44453692	.	+	.	gene_id "ENSG00000160199.7"; transcript_id "ENST00000291547.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PKNOX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PKNOX1-001"; level 2; tag "CCDS"; ccdsid "CCDS13692.1"; havana_gene "OTTHUMG00000086833.1"; havana_transcript "OTTHUMT00000195520.1";
chr21	ENSEMBL	transcript	44394751	44450441	.	+	.	gene_id "ENSG00000160199.7"; transcript_id "ENST00000432907.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PKNOX1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PKNOX1-201"; level 3; havana_gene "OTTHUMG00000086833.1";
chr21	HAVANA	transcript	44394772	44438161	.	+	.	gene_id "ENSG00000160199.7"; transcript_id "ENST00000480179.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PKNOX1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PKNOX1-002"; level 2; havana_gene "OTTHUMG00000086833.1"; havana_transcript "OTTHUMT00000195521.1";
chr21	HAVANA	transcript	44441261	44448891	.	+	.	gene_id "ENSG00000160199.7"; transcript_id "ENST00000474336.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PKNOX1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PKNOX1-003"; level 2; havana_gene "OTTHUMG00000086833.1"; havana_transcript "OTTHUMT00000195522.1";
chr21	HAVANA	transcript	44473301	44496472	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000359624.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CBS-002"; level 2; tag "CCDS"; ccdsid "CCDS13693.1"; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195524.1";
chr21	HAVANA	transcript	44473301	44488514	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000461686.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CBS-005"; level 2; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195527.1";
chr21	HAVANA	transcript	44473301	44496055	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000398165.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CBS-003"; level 2; tag "CCDS"; ccdsid "CCDS13693.1"; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195525.1";
chr21	HAVANA	transcript	44473301	44495941	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000398158.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CBS-004"; level 2; tag "CCDS"; ccdsid "CCDS13693.1"; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195526.1";
chr21	HAVANA	transcript	44473301	44496488	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000352178.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CBS-001"; level 2; tag "CCDS"; ccdsid "CCDS13693.1"; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195523.1";
chr21	ENSEMBL	transcript	44473303	44495964	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000398168.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CBS-201"; level 3; havana_gene "OTTHUMG00000086834.7";
chr21	ENSEMBL	transcript	44473634	44496971	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000539520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CBS-202"; level 3; havana_gene "OTTHUMG00000086834.7";
chr21	ENSEMBL	transcript	44473781	44490137	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000544202.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CBS-203"; level 3; havana_gene "OTTHUMG00000086834.7";
chr21	HAVANA	transcript	44473865	44479051	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000451248.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CBS-016"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195538.1";
chr21	HAVANA	transcript	44473899	44479849	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000462349.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CBS-013"; level 2; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195535.1";
chr21	HAVANA	transcript	44475182	44480630	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000491776.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CBS-006"; level 2; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195528.1";
chr21	HAVANA	transcript	44475693	44479064	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000458223.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CBS-015"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195537.1";
chr21	HAVANA	transcript	44475708	44480656	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000430013.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CBS-014"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195536.1";
chr21	HAVANA	transcript	44479386	44484337	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000496485.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CBS-011"; level 2; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195533.1";
chr21	HAVANA	transcript	44482029	44483358	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000486098.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CBS-012"; level 2; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195534.1";
chr21	HAVANA	transcript	44485726	44497053	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000441030.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CBS-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195529.7";
chr21	HAVANA	transcript	44486353	44496055	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000470912.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CBS-008"; level 2; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195530.1";
chr21	HAVANA	transcript	44488431	44495974	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000465732.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CBS-009"; level 2; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195531.1";
chr21	HAVANA	transcript	44488514	44493618	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000488526.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "CBS-010"; level 2; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195532.1";
chr21	HAVANA	transcript	44495217	44496398	.	-	.	gene_id "ENSG00000160200.12"; transcript_id "ENST00000478709.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CBS"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CBS-017"; level 2; havana_gene "OTTHUMG00000086834.7"; havana_transcript "OTTHUMT00000195539.1";
chr21	HAVANA	transcript	44513066	44516500	.	-	.	gene_id "ENSG00000160201.7"; transcript_id "ENST00000478282.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "U2AF1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "U2AF1-007"; level 2; havana_gene "OTTHUMG00000086836.2"; havana_transcript "OTTHUMT00000195547.1";
chr21	HAVANA	transcript	44513066	44527634	.	-	.	gene_id "ENSG00000160201.7"; transcript_id "ENST00000475639.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "U2AF1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "U2AF1-005"; level 2; havana_gene "OTTHUMG00000086836.2"; havana_transcript "OTTHUMT00000195545.1";
chr21	HAVANA	transcript	44513066	44527697	.	-	.	gene_id "ENSG00000160201.7"; transcript_id "ENST00000291552.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "U2AF1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "U2AF1-001"; level 2; tag "CCDS"; ccdsid "CCDS13694.1"; havana_gene "OTTHUMG00000086836.2"; havana_transcript "OTTHUMT00000195541.1";
chr21	HAVANA	transcript	44513066	44527675	.	-	.	gene_id "ENSG00000160201.7"; transcript_id "ENST00000380276.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "U2AF1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "U2AF1-002"; level 2; tag "CCDS"; ccdsid "CCDS33574.1"; havana_gene "OTTHUMG00000086836.2"; havana_transcript "OTTHUMT00000195542.1";
chr21	HAVANA	transcript	44513066	44525362	.	-	.	gene_id "ENSG00000160201.7"; transcript_id "ENST00000459639.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "U2AF1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "U2AF1-004"; level 2; tag "CCDS"; ccdsid "CCDS42948.1"; havana_gene "OTTHUMG00000086836.2"; havana_transcript "OTTHUMT00000195544.2";
chr21	HAVANA	transcript	44513066	44527634	.	-	.	gene_id "ENSG00000160201.7"; transcript_id "ENST00000464750.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "U2AF1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "U2AF1-003"; level 2; havana_gene "OTTHUMG00000086836.2"; havana_transcript "OTTHUMT00000195543.2";
chr21	HAVANA	transcript	44513066	44516053	.	-	.	gene_id "ENSG00000160201.7"; transcript_id "ENST00000471250.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "U2AF1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "U2AF1-008"; level 2; havana_gene "OTTHUMG00000086836.2"; havana_transcript "OTTHUMT00000195548.1";
chr21	ENSEMBL	transcript	44513067	44527688	.	-	.	gene_id "ENSG00000160201.7"; transcript_id "ENST00000398137.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "U2AF1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "U2AF1-201"; level 3; tag "CCDS"; ccdsid "CCDS42948.1"; havana_gene "OTTHUMG00000086836.2";
chr21	HAVANA	transcript	44513300	44527680	.	-	.	gene_id "ENSG00000160201.7"; transcript_id "ENST00000486519.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "U2AF1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "U2AF1-010"; level 2; havana_gene "OTTHUMG00000086836.2"; havana_transcript "OTTHUMT00000195550.1";
chr21	HAVANA	transcript	44515812	44524586	.	-	.	gene_id "ENSG00000160201.7"; transcript_id "ENST00000463599.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "U2AF1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "U2AF1-009"; level 2; havana_gene "OTTHUMG00000086836.2"; havana_transcript "OTTHUMT00000195549.1";
chr21	HAVANA	transcript	44517732	44527634	.	-	.	gene_id "ENSG00000160201.7"; transcript_id "ENST00000496462.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "U2AF1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "U2AF1-006"; level 2; havana_gene "OTTHUMG00000086836.2"; havana_transcript "OTTHUMT00000195546.1";
chr21	HAVANA	transcript	44520563	44522017	.	-	.	gene_id "ENSG00000160201.7"; transcript_id "ENST00000468039.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "U2AF1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "U2AF1-011"; level 2; havana_gene "OTTHUMG00000086836.2"; havana_transcript "OTTHUMT00000195551.1";
chr21	HAVANA	transcript	44535444	44535819	.	-	.	gene_id "ENSG00000232777.1"; transcript_id "ENST00000450190.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MRPL51P2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "MRPL51P2-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086843.1"; havana_transcript "OTTHUMT00000195567.1";
chr21	HAVANA	transcript	44560633	44561202	.	-	.	gene_id "ENSG00000236663.1"; transcript_id "ENST00000424933.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001631.9"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001631.9-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086845.1"; havana_transcript "OTTHUMT00000195569.1";
chr21	HAVANA	transcript	44579176	44582387	.	-	.	gene_id "ENSG00000228120.2"; transcript_id "ENST00000433840.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP001631.10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP001631.10-001"; level 2; havana_gene "OTTHUMG00000086844.1"; havana_transcript "OTTHUMT00000195568.1";
chr21	HAVANA	transcript	44589118	44592915	.	+	.	gene_id "ENSG00000160202.3"; transcript_id "ENST00000291554.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYAA"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CRYAA-001"; level 2; tag "CCDS"; ccdsid "CCDS13695.1"; havana_gene "OTTHUMG00000086842.1"; havana_transcript "OTTHUMT00000195562.1";
chr21	HAVANA	transcript	44589197	44592915	.	+	.	gene_id "ENSG00000160202.3"; transcript_id "ENST00000482775.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYAA"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "CRYAA-002"; level 2; tag "not_organism-supported"; havana_gene "OTTHUMG00000086842.1"; havana_transcript "OTTHUMT00000195563.1";
chr21	HAVANA	transcript	44589711	44592404	.	+	.	gene_id "ENSG00000160202.3"; transcript_id "ENST00000398133.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYAA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CRYAA-003"; level 2; havana_gene "OTTHUMG00000086842.1"; havana_transcript "OTTHUMT00000195564.1";
chr21	HAVANA	transcript	44590266	44592629	.	+	.	gene_id "ENSG00000160202.3"; transcript_id "ENST00000398132.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYAA"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "CRYAA-004"; level 2; havana_gene "OTTHUMG00000086842.1"; havana_transcript "OTTHUMT00000195565.1";
chr21	HAVANA	transcript	44590337	44592748	.	+	.	gene_id "ENSG00000160202.3"; transcript_id "ENST00000468016.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CRYAA"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CRYAA-005"; level 2; havana_gene "OTTHUMG00000086842.1"; havana_transcript "OTTHUMT00000195566.1";
chr21	HAVANA	transcript	44742297	44751919	.	-	.	gene_id "ENSG00000237864.1"; transcript_id "ENST00000450205.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "C21orf136"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "C21orf136-001"; level 2; havana_gene "OTTHUMG00000086864.1"; havana_transcript "OTTHUMT00000195622.1";
chr21	ENSEMBL	transcript	44748022	44751879	.	-	.	gene_id "ENSG00000256423.1"; transcript_id "ENST00000542551.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP001046.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP001046.1-201"; level 3;
chr21	HAVANA	transcript	44778027	44782229	.	-	.	gene_id "ENSG00000237989.1"; transcript_id "ENST00000442815.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP001046.5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001046.5-001"; level 2; havana_gene "OTTHUMG00000086865.1"; havana_transcript "OTTHUMT00000195623.1";
chr21	HAVANA	transcript	44783212	44786446	.	+	.	gene_id "ENSG00000225637.1"; transcript_id "ENST00000435702.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001046.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001046.6-001"; level 2; havana_gene "OTTHUMG00000086868.1"; havana_transcript "OTTHUMT00000195633.1";
chr21	HAVANA	transcript	44834395	44847008	.	-	.	gene_id "ENSG00000142178.7"; transcript_id "ENST00000270162.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SIK1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SIK1-001"; level 2; tag "CCDS"; ccdsid "CCDS33575.1"; havana_gene "OTTHUMG00000086874.1"; havana_transcript "OTTHUMT00000195654.1";
chr21	HAVANA	transcript	44840992	44841885	.	-	.	gene_id "ENSG00000142178.7"; transcript_id "ENST00000478426.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SIK1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SIK1-002"; level 2; havana_gene "OTTHUMG00000086874.1"; havana_transcript "OTTHUMT00000195655.1";
chr21	HAVANA	transcript	44866481	44873773	.	+	.	gene_id "ENSG00000188660.3"; transcript_id "ENST00000448049.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf125"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf125-001"; level 2; havana_gene "OTTHUMG00000086866.1"; havana_transcript "OTTHUMT00000195624.1";
chr21	HAVANA	transcript	44869904	44873773	.	+	.	gene_id "ENSG00000188660.3"; transcript_id "ENST00000342757.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf125"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf125-002"; level 2; havana_gene "OTTHUMG00000086866.1"; havana_transcript "OTTHUMT00000195625.1";
chr21	HAVANA	transcript	44881974	44884853	.	-	.	gene_id "ENSG00000185186.4"; transcript_id "ENST00000426942.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf84"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf84-002"; level 2; havana_gene "OTTHUMG00000086867.1"; havana_transcript "OTTHUMT00000195627.1";
chr21	HAVANA	transcript	44881974	44898103	.	-	.	gene_id "ENSG00000185186.4"; transcript_id "ENST00000332440.3"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf84"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf84-001"; level 2; havana_gene "OTTHUMG00000086867.1"; havana_transcript "OTTHUMT00000195626.1";
chr21	HAVANA	transcript	44881992	44884797	.	-	.	gene_id "ENSG00000185186.4"; transcript_id "ENST00000451543.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf84"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf84-003"; level 2; havana_gene "OTTHUMG00000086867.1"; havana_transcript "OTTHUMT00000195628.1";
chr21	HAVANA	transcript	44881992	44884696	.	-	.	gene_id "ENSG00000185186.4"; transcript_id "ENST00000413721.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf84"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf84-005"; level 2; havana_gene "OTTHUMG00000086867.1"; havana_transcript "OTTHUMT00000195630.1";
chr21	HAVANA	transcript	44881992	44884797	.	-	.	gene_id "ENSG00000185186.4"; transcript_id "ENST00000418516.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf84"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf84-004"; level 2; havana_gene "OTTHUMG00000086867.1"; havana_transcript "OTTHUMT00000195629.1";
chr21	HAVANA	transcript	44890313	44891472	.	-	.	gene_id "ENSG00000185186.4"; transcript_id "ENST00000427188.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf84"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf84-006"; level 2; havana_gene "OTTHUMG00000086867.1"; havana_transcript "OTTHUMT00000195631.1";
chr21	HAVANA	transcript	44895805	44899414	.	-	.	gene_id "ENSG00000185186.4"; transcript_id "ENST00000441283.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf84"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf84-007"; level 2; havana_gene "OTTHUMG00000086867.1"; havana_transcript "OTTHUMT00000195632.1";
chr21	HAVANA	transcript	44885189	44887178	.	+	.	gene_id "ENSG00000223975.1"; transcript_id "ENST00000436359.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001048.4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001048.4-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086871.1"; havana_transcript "OTTHUMT00000195650.1";
chr21	HAVANA	transcript	44949072	45079374	.	-	.	gene_id "ENSG00000160207.4"; transcript_id "ENST00000291560.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HSF2BP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HSF2BP-001"; level 2; tag "CCDS"; ccdsid "CCDS13697.1"; havana_gene "OTTHUMG00000086863.1"; havana_transcript "OTTHUMT00000195620.1";
chr21	ENSEMBL	transcript	44949082	45078025	.	-	.	gene_id "ENSG00000160207.4"; transcript_id "ENST00000542962.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HSF2BP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "HSF2BP-201"; level 3; havana_gene "OTTHUMG00000086863.1";
chr21	HAVANA	transcript	45033732	45079351	.	-	.	gene_id "ENSG00000160207.4"; transcript_id "ENST00000443485.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "HSF2BP"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "HSF2BP-002"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086863.1"; havana_transcript "OTTHUMT00000195621.1";
chr21	HAVANA	transcript	44971110	44971481	.	+	.	gene_id "ENSG00000214326.2"; transcript_id "ENST00000398116.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPL31P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPL31P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086873.1"; havana_transcript "OTTHUMT00000195653.1";
chr21	HAVANA	transcript	44985120	44985500	.	+	.	gene_id "ENSG00000234289.3"; transcript_id "ENST00000464664.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "H2BFS"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "H2BFS-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000086869.2"; havana_transcript "OTTHUMT00000195634.2";
chr21	HAVANA	transcript	45079429	45115958	.	+	.	gene_id "ENSG00000160208.10"; transcript_id "ENST00000340648.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RRP1B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RRP1B-001"; level 2; tag "CCDS"; ccdsid "CCDS33577.1"; havana_gene "OTTHUMG00000086872.2"; havana_transcript "OTTHUMT00000195651.1";
chr21	HAVANA	transcript	45105655	45194144	.	+	.	gene_id "ENSG00000160208.10"; transcript_id "ENST00000506281.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RRP1B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "RRP1B-003"; level 2; tag "cds_start_NF"; havana_gene "OTTHUMG00000086872.2"; havana_transcript "OTTHUMT00000366543.1";
chr21	HAVANA	transcript	45106013	45115958	.	+	.	gene_id "ENSG00000160208.10"; transcript_id "ENST00000470886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RRP1B"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RRP1B-002"; level 2; havana_gene "OTTHUMG00000086872.2"; havana_transcript "OTTHUMT00000195652.1";
chr21	HAVANA	transcript	45138975	45158742	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000398081.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PDXK-018"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195658.1";
chr21	HAVANA	transcript	45138978	45182188	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000468090.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDXK-001"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195635.2";
chr21	HAVANA	transcript	45138993	45182188	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000291565.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PDXK-002"; level 2; tag "CCDS"; ccdsid "CCDS13699.1"; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195636.1";
chr21	HAVANA	transcript	45139028	45182188	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000463355.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PDXK-003"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195637.2";
chr21	HAVANA	transcript	45139057	45172510	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000398085.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-007"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195641.1";
chr21	HAVANA	transcript	45139058	45143774	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000476084.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-012"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195646.1";
chr21	HAVANA	transcript	45139104	45164531	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000470029.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-006"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195640.1";
chr21	HAVANA	transcript	45148611	45173535	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000498040.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-008"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195642.1";
chr21	HAVANA	transcript	45148781	45158742	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000327574.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PDXK-019"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195656.1";
chr21	HAVANA	transcript	45148794	45167067	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000472777.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-009"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195643.1";
chr21	HAVANA	transcript	45148798	45158712	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000476313.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-017"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195657.1";
chr21	HAVANA	transcript	45153552	45173475	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000481512.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-013"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195647.1";
chr21	HAVANA	transcript	45160897	45173535	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000490666.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-014"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195648.1";
chr21	HAVANA	transcript	45161301	45182188	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000467908.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PDXK-010"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195644.2";
chr21	HAVANA	transcript	45161301	45176136	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000467640.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-004"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195638.1";
chr21	HAVANA	transcript	45161346	45176136	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000343528.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-005"; level 2; tag "non_canonical_TEC"; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195639.1";
chr21	HAVANA	transcript	45161357	45176025	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000398078.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-011"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195645.1";
chr21	HAVANA	transcript	45165584	45176054	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000468392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-015"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195649.1";
chr21	HAVANA	transcript	45173464	45176043	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000461123.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-016"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000195674.1";
chr21	HAVANA	transcript	45182098	45194151	.	+	.	gene_id "ENSG00000160209.12"; transcript_id "ENST00000498150.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PDXK"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PDXK-020"; level 2; havana_gene "OTTHUMG00000086870.4"; havana_transcript "OTTHUMT00000328975.1";
chr21	HAVANA	transcript	45141573	45152146	.	+	.	gene_id "ENSG00000241238.1"; transcript_id "ENST00000438837.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001052.9"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001052.9-001"; level 2; havana_gene "OTTHUMG00000086887.1"; havana_transcript "OTTHUMT00000195691.1";
chr21	ENSEMBL	transcript	45153943	45158739	.	+	.	gene_id "ENSG00000256247.1"; transcript_id "ENST00000400399.3"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP001052.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AP001052.1-201"; level 3;
chr21	ENSEMBL	transcript	45180376	45182177	.	+	.	gene_id "ENSG00000255818.1"; transcript_id "ENST00000542141.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP001053.1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "AP001053.1-201"; level 3;
chr21	HAVANA	transcript	45192393	45196326	.	-	.	gene_id "ENSG00000160213.5"; transcript_id "ENST00000291568.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CSTB"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "CSTB-001"; level 2; tag "CCDS"; ccdsid "CCDS13701.1"; havana_gene "OTTHUMG00000086886.3"; havana_transcript "OTTHUMT00000195689.1";
chr21	HAVANA	transcript	45194071	45196187	.	-	.	gene_id "ENSG00000160213.5"; transcript_id "ENST00000480147.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "CSTB"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "CSTB-002"; level 2; havana_gene "OTTHUMG00000086886.3"; havana_transcript "OTTHUMT00000195690.1";
chr21	HAVANA	transcript	45203004	45203454	.	+	.	gene_id "ENSG00000234030.1"; transcript_id "ENST00000452969.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001053.13"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001053.13-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000154997.1"; havana_transcript "OTTHUMT00000337995.1";
chr21	HAVANA	transcript	45209394	45225174	.	+	.	gene_id "ENSG00000160214.6"; transcript_id "ENST00000497547.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RRP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RRP1-001"; level 2; tag "CCDS"; ccdsid "CCDS42951.1"; havana_gene "OTTHUMG00000086884.2"; havana_transcript "OTTHUMT00000195680.1";
chr21	HAVANA	transcript	45209394	45217418	.	+	.	gene_id "ENSG00000160214.6"; transcript_id "ENST00000475534.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RRP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RRP1-005"; level 2; havana_gene "OTTHUMG00000086884.2"; havana_transcript "OTTHUMT00000195684.1";
chr21	HAVANA	transcript	45209440	45217863	.	+	.	gene_id "ENSG00000160214.6"; transcript_id "ENST00000483896.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RRP1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "RRP1-006"; level 2; havana_gene "OTTHUMG00000086884.2"; havana_transcript "OTTHUMT00000195685.2";
chr21	HAVANA	transcript	45209446	45223936	.	+	.	gene_id "ENSG00000160214.6"; transcript_id "ENST00000291569.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RRP1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "RRP1-002"; level 2; havana_gene "OTTHUMG00000086884.2"; havana_transcript "OTTHUMT00000195681.1";
chr21	ENSEMBL	transcript	45209457	45223979	.	+	.	gene_id "ENSG00000160214.6"; transcript_id "ENST00000400387.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RRP1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "RRP1-201"; level 3; havana_gene "OTTHUMG00000086884.2";
chr21	HAVANA	transcript	45209458	45213300	.	+	.	gene_id "ENSG00000160214.6"; transcript_id "ENST00000492638.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RRP1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RRP1-007"; level 2; havana_gene "OTTHUMG00000086884.2"; havana_transcript "OTTHUMT00000195686.1";
chr21	HAVANA	transcript	45210374	45211293	.	+	.	gene_id "ENSG00000160214.6"; transcript_id "ENST00000473988.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RRP1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RRP1-008"; level 2; havana_gene "OTTHUMG00000086884.2"; havana_transcript "OTTHUMT00000195687.1";
chr21	HAVANA	transcript	45212812	45225174	.	+	.	gene_id "ENSG00000160214.6"; transcript_id "ENST00000467112.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RRP1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "RRP1-003"; level 2; havana_gene "OTTHUMG00000086884.2"; havana_transcript "OTTHUMT00000195682.1";
chr21	HAVANA	transcript	45217242	45225174	.	+	.	gene_id "ENSG00000160214.6"; transcript_id "ENST00000471909.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "RRP1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RRP1-004"; level 2; havana_gene "OTTHUMG00000086884.2"; havana_transcript "OTTHUMT00000195683.1";
chr21	HAVANA	transcript	45225639	45230242	.	-	.	gene_id "ENSG00000215458.4"; transcript_id "ENST00000448247.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001053.11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001053.11-001"; level 2; havana_gene "OTTHUMG00000086882.1"; havana_transcript "OTTHUMT00000195676.1";
chr21	HAVANA	transcript	45225639	45230212	.	-	.	gene_id "ENSG00000215458.4"; transcript_id "ENST00000437258.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001053.11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001053.11-003"; level 2; havana_gene "OTTHUMG00000086882.1"; havana_transcript "OTTHUMT00000195678.1";
chr21	HAVANA	transcript	45225639	45232448	.	-	.	gene_id "ENSG00000215458.4"; transcript_id "ENST00000400385.2"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001053.11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001053.11-002"; level 2; havana_gene "OTTHUMG00000086882.1"; havana_transcript "OTTHUMT00000195677.1";
chr21	ENSEMBL	transcript	45228911	45230242	.	-	.	gene_id "ENSG00000215458.4"; transcript_id "ENST00000543603.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001053.11"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001053.11-201"; level 3; havana_gene "OTTHUMG00000086882.1";
chr21	HAVANA	transcript	45275771	45276223	.	-	.	gene_id "ENSG00000226543.2"; transcript_id "ENST00000449877.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MYL6P1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "MYL6P1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086885.1"; havana_transcript "OTTHUMT00000195688.1";
chr21	ENSEMBL	transcript	45275969	45276136	.	-	.	gene_id "ENSG00000226543.2"; transcript_id "ENST00000434430.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "MYL6P1"; transcript_type "retrotransposed"; transcript_status "KNOWN"; transcript_name "MYL6P1-201"; level 1; havana_gene "OTTHUMG00000086885.1";
chr21	HAVANA	transcript	45285067	45406417	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000291572.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AGPAT3-001"; level 2; tag "CCDS"; ccdsid "CCDS13703.1"; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195719.1";
chr21	HAVANA	transcript	45286500	45287627	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000474735.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AGPAT3-009"; level 2; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195727.1";
chr21	HAVANA	transcript	45287123	45387886	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000448287.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AGPAT3-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195726.1";
chr21	HAVANA	transcript	45302425	45404554	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000398061.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AGPAT3-002"; level 2; tag "CCDS"; ccdsid "CCDS13703.1"; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195720.1";
chr21	HAVANA	transcript	45323772	45404554	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000327505.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AGPAT3-201"; level 2; tag "CCDS"; ccdsid "CCDS13703.1"; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195721.1";
chr21	HAVANA	transcript	45336153	45389034	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000445582.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AGPAT3-010"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195728.1";
chr21	HAVANA	transcript	45344889	45406417	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000398063.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AGPAT3-202"; level 2; tag "CCDS"; ccdsid "CCDS13703.1"; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195722.1";
chr21	ENSEMBL	transcript	45345279	45405193	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000438598.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AGPAT3-203"; level 3; havana_gene "OTTHUMG00000086892.12";
chr21	HAVANA	transcript	45366811	45404554	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000398058.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AGPAT3-005"; level 2; tag "CCDS"; ccdsid "CCDS13703.1"; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195723.1";
chr21	HAVANA	transcript	45366831	45391371	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000457068.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AGPAT3-011"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195729.12";
chr21	HAVANA	transcript	45366887	45379677	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000448845.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AGPAT3-012"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195730.1";
chr21	HAVANA	transcript	45366891	45374983	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000498670.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AGPAT3-013"; level 2; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195731.1";
chr21	HAVANA	transcript	45370568	45391371	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000422850.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AGPAT3-014"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195732.1";
chr21	HAVANA	transcript	45370594	45375041	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000497909.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AGPAT3-015"; level 2; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195733.1";
chr21	HAVANA	transcript	45374429	45402598	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000546158.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AGPAT3-003"; level 2; tag "CCDS"; ccdsid "CCDS13703.1"; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195722.1";
chr21	HAVANA	transcript	45379664	45402605	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000479117.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AGPAT3-006"; level 2; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195724.1";
chr21	HAVANA	transcript	45379670	45389148	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000481319.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AGPAT3-016"; level 2; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195734.1";
chr21	HAVANA	transcript	45384810	45402258	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000467358.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AGPAT3-007"; level 2; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195725.1";
chr21	HAVANA	transcript	45391284	45401293	.	+	.	gene_id "ENSG00000160216.11"; transcript_id "ENST00000484865.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AGPAT3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AGPAT3-017"; level 2; havana_gene "OTTHUMG00000086892.12"; havana_transcript "OTTHUMT00000195735.1";
chr21	ENSEMBL	transcript	45339676	45339782	.	-	.	gene_id "ENSG00000199598.1"; transcript_id "ENST00000362728.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.43"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.43-201"; level 3;
chr21	ENSEMBL	transcript	45416203	45416301	.	-	.	gene_id "ENSG00000252606.1"; transcript_id "ENST00000516797.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.1198"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.1198-201"; level 3;
chr21	HAVANA	transcript	45432200	45526433	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000291574.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRAPPC10-001"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS13704.1"; havana_gene "OTTHUMG00000086894.3"; havana_transcript "OTTHUMT00000195737.1";
chr21	HAVANA	transcript	45432200	45480143	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000380221.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TRAPPC10-003"; level 2; havana_gene "OTTHUMG00000086894.3"; havana_transcript "OTTHUMT00000195739.1";
chr21	HAVANA	transcript	45432206	45524614	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000422875.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "TRAPPC10-002"; level 2; havana_gene "OTTHUMG00000086894.3"; havana_transcript "OTTHUMT00000195738.2";
chr21	HAVANA	transcript	45499357	45502781	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000481460.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRAPPC10-006"; level 2; havana_gene "OTTHUMG00000086894.3"; havana_transcript "OTTHUMT00000195742.1";
chr21	HAVANA	transcript	45499674	45502896	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000461889.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRAPPC10-010"; level 2; havana_gene "OTTHUMG00000086894.3"; havana_transcript "OTTHUMT00000327497.1";
chr21	ENSEMBL	transcript	45502999	45524073	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000542855.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRAPPC10-201"; level 3; havana_gene "OTTHUMG00000086894.3";
chr21	HAVANA	transcript	45507920	45526433	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000459741.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRAPPC10-004"; level 2; havana_gene "OTTHUMG00000086894.3"; havana_transcript "OTTHUMT00000195740.1";
chr21	HAVANA	transcript	45509366	45518305	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000465905.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TRAPPC10-012"; level 2; havana_gene "OTTHUMG00000086894.3"; havana_transcript "OTTHUMT00000327499.1";
chr21	HAVANA	transcript	45509382	45516585	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000483973.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TRAPPC10-007"; level 2; havana_gene "OTTHUMG00000086894.3"; havana_transcript "OTTHUMT00000195743.1";
chr21	HAVANA	transcript	45509582	45518315	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000486746.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "TRAPPC10-013"; level 2; havana_gene "OTTHUMG00000086894.3"; havana_transcript "OTTHUMT00000327500.1";
chr21	HAVANA	transcript	45509641	45518415	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000469521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRAPPC10-008"; level 2; havana_gene "OTTHUMG00000086894.3"; havana_transcript "OTTHUMT00000195744.1";
chr21	HAVANA	transcript	45511634	45518306	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000485621.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRAPPC10-011"; level 2; havana_gene "OTTHUMG00000086894.3"; havana_transcript "OTTHUMT00000327498.1";
chr21	HAVANA	transcript	45516461	45524932	.	+	.	gene_id "ENSG00000160218.7"; transcript_id "ENST00000468864.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRAPPC10"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "TRAPPC10-005"; level 2; havana_gene "OTTHUMG00000086894.3"; havana_transcript "OTTHUMT00000195741.1";
chr21	HAVANA	transcript	45466228	45466922	.	-	.	gene_id "ENSG00000213440.2"; transcript_id "ENST00000416034.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "H2AFZP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "H2AFZP1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086895.1"; havana_transcript "OTTHUMT00000195745.1";
chr21	HAVANA	transcript	45527176	45551063	.	+	.	gene_id "ENSG00000241945.2"; transcript_id "ENST00000291576.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PWP2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PWP2-001"; level 2; tag "CCDS"; ccdsid "CCDS33579.1"; havana_gene "OTTHUMG00000086893.3"; havana_transcript "OTTHUMT00000195736.2";
chr21	HAVANA	transcript	45527254	45535625	.	+	.	gene_id "ENSG00000241945.2"; transcript_id "ENST00000456705.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PWP2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PWP2-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086893.3"; havana_transcript "OTTHUMT00000195765.1";
chr21	HAVANA	transcript	45534457	45537724	.	+	.	gene_id "ENSG00000241945.2"; transcript_id "ENST00000486126.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PWP2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PWP2-004"; level 2; havana_gene "OTTHUMG00000086893.3"; havana_transcript "OTTHUMT00000195766.1";
chr21	HAVANA	transcript	45539040	45547736	.	+	.	gene_id "ENSG00000241945.2"; transcript_id "ENST00000471490.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PWP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PWP2-002"; level 2; havana_gene "OTTHUMG00000086893.3"; havana_transcript "OTTHUMT00000195764.1";
chr21	HAVANA	transcript	45545892	45548480	.	+	.	gene_id "ENSG00000241945.2"; transcript_id "ENST00000494310.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PWP2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PWP2-005"; level 2; havana_gene "OTTHUMG00000086893.3"; havana_transcript "OTTHUMT00000195767.1";
chr21	HAVANA	transcript	45547680	45548532	.	+	.	gene_id "ENSG00000241945.2"; transcript_id "ENST00000476948.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PWP2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PWP2-006"; level 2; havana_gene "OTTHUMG00000086893.3"; havana_transcript "OTTHUMT00000195768.1";
chr21	HAVANA	transcript	45548223	45563243	.	+	.	gene_id "ENSG00000248354.1"; transcript_id "ENST00000433711.1"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "AP001055.7"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "AP001055.7-001"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000161993.1"; havana_transcript "OTTHUMT00000366677.1";
chr21	HAVANA	transcript	45553487	45565605	.	+	.	gene_id "ENSG00000160221.10"; transcript_id "ENST00000291577.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf33"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf33-001"; level 1; tag "exp_conf"; tag "CCDS"; ccdsid "CCDS33580.1"; havana_gene "OTTHUMG00000086916.6"; havana_transcript "OTTHUMT00000195824.1";
chr21	HAVANA	transcript	45553498	45564894	.	+	.	gene_id "ENSG00000160221.10"; transcript_id "ENST00000495007.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf33"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C21orf33-005"; level 2; havana_gene "OTTHUMG00000086916.6"; havana_transcript "OTTHUMT00000195828.2";
chr21	HAVANA	transcript	45553500	45561299	.	+	.	gene_id "ENSG00000160221.10"; transcript_id "ENST00000427803.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf33"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf33-002"; level 2; havana_gene "OTTHUMG00000086916.6"; havana_transcript "OTTHUMT00000195825.1";
chr21	HAVANA	transcript	45553521	45561299	.	+	.	gene_id "ENSG00000160221.10"; transcript_id "ENST00000493883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf33"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf33-003"; level 2; havana_gene "OTTHUMG00000086916.6"; havana_transcript "OTTHUMT00000195826.1";
chr21	HAVANA	transcript	45553556	45560486	.	+	.	gene_id "ENSG00000160221.10"; transcript_id "ENST00000480786.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf33"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C21orf33-009"; level 2; havana_gene "OTTHUMG00000086916.6"; havana_transcript "OTTHUMT00000195832.1";
chr21	HAVANA	transcript	45553562	45565605	.	+	.	gene_id "ENSG00000160221.10"; transcript_id "ENST00000348499.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf33"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf33-011"; level 2; tag "CCDS"; ccdsid "CCDS33581.1"; havana_gene "OTTHUMG00000086916.6"; havana_transcript "OTTHUMT00000269012.1";
chr21	HAVANA	transcript	45553661	45561299	.	+	.	gene_id "ENSG00000160221.10"; transcript_id "ENST00000389690.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf33"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf33-004"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086916.6"; havana_transcript "OTTHUMT00000195827.1";
chr21	HAVANA	transcript	45553696	45565605	.	+	.	gene_id "ENSG00000160221.10"; transcript_id "ENST00000449622.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf33"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf33-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086916.6"; havana_transcript "OTTHUMT00000195829.1";
chr21	HAVANA	transcript	45555989	45557457	.	+	.	gene_id "ENSG00000160221.10"; transcript_id "ENST00000488392.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf33"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C21orf33-007"; level 2; havana_gene "OTTHUMG00000086916.6"; havana_transcript "OTTHUMT00000195830.1";
chr21	HAVANA	transcript	45556001	45565605	.	+	.	gene_id "ENSG00000160221.10"; transcript_id "ENST00000419699.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf33"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf33-010"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086916.6"; havana_transcript "OTTHUMT00000195833.1";
chr21	HAVANA	transcript	45556756	45557448	.	+	.	gene_id "ENSG00000160221.10"; transcript_id "ENST00000470545.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf33"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C21orf33-008"; level 2; havana_gene "OTTHUMG00000086916.6"; havana_transcript "OTTHUMT00000195831.1";
chr21	HAVANA	transcript	45578623	45579955	.	-	.	gene_id "ENSG00000225331.1"; transcript_id "ENST00000411694.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001055.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001055.6-002"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086913.1"; havana_transcript "OTTHUMT00000195819.1";
chr21	HAVANA	transcript	45578898	45579959	.	-	.	gene_id "ENSG00000225331.1"; transcript_id "ENST00000424921.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001055.6"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001055.6-001"; level 2; havana_gene "OTTHUMG00000086913.1"; havana_transcript "OTTHUMT00000195818.1";
chr21	HAVANA	transcript	45595372	45596336	.	+	.	gene_id "ENSG00000237604.1"; transcript_id "ENST00000411956.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001056.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001056.1-001"; level 2; havana_gene "OTTHUMG00000086912.1"; havana_transcript "OTTHUMT00000195817.1";
chr21	HAVANA	transcript	45621173	45622579	.	+	.	gene_id "ENSG00000232124.1"; transcript_id "ENST00000437557.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001057.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001057.1-001"; level 2; havana_gene "OTTHUMG00000086911.1"; havana_transcript "OTTHUMT00000195816.1";
chr21	HAVANA	transcript	45626408	45627282	.	-	.	gene_id "ENSG00000232698.1"; transcript_id "ENST00000423967.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001058.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001058.3-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086915.1"; havana_transcript "OTTHUMT00000195823.1";
chr21	HAVANA	transcript	45642874	45660828	.	-	.	gene_id "ENSG00000160223.12"; transcript_id "ENST00000407780.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ICOSLG"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ICOSLG-001"; level 2; tag "CCDS"; ccdsid "CCDS42952.1"; havana_gene "OTTHUMG00000086920.1"; havana_transcript "OTTHUMT00000195838.1";
chr21	HAVANA	transcript	45642874	45660723	.	-	.	gene_id "ENSG00000160223.12"; transcript_id "ENST00000344330.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ICOSLG"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ICOSLG-003"; level 2; havana_gene "OTTHUMG00000086920.1"; havana_transcript "OTTHUMT00000195840.1";
chr21	HAVANA	transcript	45646717	45660828	.	-	.	gene_id "ENSG00000160223.12"; transcript_id "ENST00000400379.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ICOSLG"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ICOSLG-004"; level 2; havana_gene "OTTHUMG00000086920.1"; havana_transcript "OTTHUMT00000195841.1";
chr21	HAVANA	transcript	45646717	45660849	.	-	.	gene_id "ENSG00000160223.12"; transcript_id "ENST00000400377.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ICOSLG"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ICOSLG-002"; level 2; havana_gene "OTTHUMG00000086920.1"; havana_transcript "OTTHUMT00000195839.1";
chr21	HAVANA	transcript	45666222	45671121	.	-	.	gene_id "ENSG00000142182.4"; transcript_id "ENST00000436357.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DNMT3L"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "DNMT3L-003"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000086914.4"; havana_transcript "OTTHUMT00000195822.1";
chr21	HAVANA	transcript	45666222	45682099	.	-	.	gene_id "ENSG00000142182.4"; transcript_id "ENST00000270172.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DNMT3L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DNMT3L-201"; level 2; tag "CCDS"; ccdsid "CCDS13705.1"; havana_gene "OTTHUMG00000086914.4"; havana_transcript "OTTHUMT00000195820.1";
chr21	HAVANA	transcript	45666223	45682099	.	-	.	gene_id "ENSG00000142182.4"; transcript_id "ENST00000418993.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DNMT3L"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DNMT3L-001"; level 2; tag "CCDS"; ccdsid "CCDS46650.1"; havana_gene "OTTHUMG00000086914.4"; havana_transcript "OTTHUMT00000195820.1";
chr21	HAVANA	transcript	45670693	45681765	.	-	.	gene_id "ENSG00000142182.4"; transcript_id "ENST00000431166.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DNMT3L"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "DNMT3L-002"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000086914.4"; havana_transcript "OTTHUMT00000195821.4";
chr21	HAVANA	transcript	45670696	45671403	.	+	.	gene_id "ENSG00000232010.1"; transcript_id "ENST00000442785.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001059.5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001059.5-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086917.1"; havana_transcript "OTTHUMT00000195834.1";
chr21	HAVANA	transcript	45705721	45718531	.	+	.	gene_id "ENSG00000160224.10"; transcript_id "ENST00000530812.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIRE"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIRE-005"; level 2; havana_gene "OTTHUMG00000086921.3"; havana_transcript "OTTHUMT00000390494.1";
chr21	HAVANA	transcript	45705729	45717622	.	+	.	gene_id "ENSG00000160224.10"; transcript_id "ENST00000527919.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIRE"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "AIRE-004"; level 2; havana_gene "OTTHUMG00000086921.3"; havana_transcript "OTTHUMT00000390495.1";
chr21	HAVANA	transcript	45705763	45718102	.	+	.	gene_id "ENSG00000160224.10"; transcript_id "ENST00000291582.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIRE"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIRE-001"; level 2; tag "CCDS"; ccdsid "CCDS13706.1"; havana_gene "OTTHUMG00000086921.3"; havana_transcript "OTTHUMT00000195842.2";
chr21	HAVANA	transcript	45710150	45717872	.	+	.	gene_id "ENSG00000160224.10"; transcript_id "ENST00000468282.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIRE"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "AIRE-003"; level 2; havana_gene "OTTHUMG00000086921.3"; havana_transcript "OTTHUMT00000195844.3";
chr21	HAVANA	transcript	45710150	45717872	.	+	.	gene_id "ENSG00000160224.10"; transcript_id "ENST00000337909.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIRE"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIRE-002"; level 2; tag "CCDS"; ccdsid "CCDS13707.1"; havana_gene "OTTHUMG00000086921.3"; havana_transcript "OTTHUMT00000195843.3";
chr21	ENSEMBL	transcript	45710274	45718110	.	+	.	gene_id "ENSG00000160224.10"; transcript_id "ENST00000397994.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIRE"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIRE-203"; level 3; tag "CCDS"; ccdsid "CCDS13707.1"; havana_gene "OTTHUMG00000086921.3";
chr21	ENSEMBL	transcript	45710690	45718102	.	+	.	gene_id "ENSG00000160224.10"; transcript_id "ENST00000355347.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIRE"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIRE-202"; level 3; havana_gene "OTTHUMG00000086921.3";
chr21	ENSEMBL	transcript	45710690	45718102	.	+	.	gene_id "ENSG00000160224.10"; transcript_id "ENST00000329347.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AIRE"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AIRE-201"; level 3; havana_gene "OTTHUMG00000086921.3";
chr21	HAVANA	transcript	45719934	45747259	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000397961.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "PFKL-002"; level 2; havana_gene "OTTHUMG00000086910.2"; havana_transcript "OTTHUMT00000195806.2";
chr21	HAVANA	transcript	45719934	45747259	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000349048.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PFKL-001"; level 2; tag "CCDS"; ccdsid "CCDS33582.1"; havana_gene "OTTHUMG00000086910.2"; havana_transcript "OTTHUMT00000195805.1";
chr21	HAVANA	transcript	45719950	45736222	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000496824.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PFKL-008"; level 2; havana_gene "OTTHUMG00000086910.2"; havana_transcript "OTTHUMT00000195812.1";
chr21	ENSEMBL	transcript	45719971	45733891	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000381188.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PFKL-201"; level 3; havana_gene "OTTHUMG00000086910.2";
chr21	ENSEMBL	transcript	45719974	45747253	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000534847.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PFKL-203"; level 3; havana_gene "OTTHUMG00000086910.2";
chr21	HAVANA	transcript	45719979	45747259	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000466134.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PFKL-003"; level 2; havana_gene "OTTHUMG00000086910.2"; havana_transcript "OTTHUMT00000195807.1";
chr21	HAVANA	transcript	45725077	45733837	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000491298.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PFKL-009"; level 2; havana_gene "OTTHUMG00000086910.2"; havana_transcript "OTTHUMT00000195813.1";
chr21	ENSEMBL	transcript	45725211	45747253	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000403390.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PFKL-202"; level 3; havana_gene "OTTHUMG00000086910.2";
chr21	HAVANA	transcript	45735410	45747259	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000474114.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PFKL-004"; level 2; havana_gene "OTTHUMG00000086910.2"; havana_transcript "OTTHUMT00000195808.1";
chr21	HAVANA	transcript	45739506	45747259	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000498841.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PFKL-005"; level 2; havana_gene "OTTHUMG00000086910.2"; havana_transcript "OTTHUMT00000195809.1";
chr21	HAVANA	transcript	45739724	45744426	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000460020.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PFKL-010"; level 2; havana_gene "OTTHUMG00000086910.2"; havana_transcript "OTTHUMT00000195814.1";
chr21	HAVANA	transcript	45739750	45747259	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000467315.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PFKL-006"; level 2; havana_gene "OTTHUMG00000086910.2"; havana_transcript "OTTHUMT00000195810.1";
chr21	HAVANA	transcript	45740460	45747259	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000460521.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PFKL-007"; level 2; havana_gene "OTTHUMG00000086910.2"; havana_transcript "OTTHUMT00000195811.1";
chr21	HAVANA	transcript	45742845	45745518	.	+	.	gene_id "ENSG00000141959.11"; transcript_id "ENST00000495274.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PFKL"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PFKL-011"; level 2; havana_gene "OTTHUMG00000086910.2"; havana_transcript "OTTHUMT00000195815.1";
chr21	HAVANA	transcript	45748827	45750104	.	-	.	gene_id "ENSG00000241728.1"; transcript_id "ENST00000444409.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001062.8"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001062.8-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086918.1"; havana_transcript "OTTHUMT00000195835.1";
chr21	HAVANA	transcript	45748827	45749929	.	-	.	gene_id "ENSG00000241728.1"; transcript_id "ENST00000422357.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001062.8"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001062.8-002"; level 2; havana_gene "OTTHUMG00000086918.1"; havana_transcript "OTTHUMT00000195836.1";
chr21	HAVANA	transcript	45748827	45759285	.	-	.	gene_id "ENSG00000160226.10"; transcript_id "ENST00000339818.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf2-002"; level 2; tag "CCDS"; ccdsid "CCDS13709.1"; havana_gene "OTTHUMG00000086909.1"; havana_transcript "OTTHUMT00000195799.1";
chr21	ENSEMBL	transcript	45749773	45754194	.	-	.	gene_id "ENSG00000160226.10"; transcript_id "ENST00000380160.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf2-201"; level 3; havana_gene "OTTHUMG00000086909.1";
chr21	HAVANA	transcript	45749774	45758667	.	-	.	gene_id "ENSG00000160226.10"; transcript_id "ENST00000462742.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C21orf2-005"; level 2; havana_gene "OTTHUMG00000086909.1"; havana_transcript "OTTHUMT00000195802.1";
chr21	HAVANA	transcript	45749774	45758221	.	-	.	gene_id "ENSG00000160226.10"; transcript_id "ENST00000496321.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf2-004"; level 2; havana_gene "OTTHUMG00000086909.1"; havana_transcript "OTTHUMT00000195801.1";
chr21	HAVANA	transcript	45749774	45759285	.	-	.	gene_id "ENSG00000160226.10"; transcript_id "ENST00000325223.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf2-001"; level 2; havana_gene "OTTHUMG00000086909.1"; havana_transcript "OTTHUMT00000195798.1";
chr21	HAVANA	transcript	45749774	45751851	.	-	.	gene_id "ENSG00000160226.10"; transcript_id "ENST00000470196.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf2-006"; level 2; havana_gene "OTTHUMG00000086909.1"; havana_transcript "OTTHUMT00000195803.1";
chr21	HAVANA	transcript	45749774	45759276	.	-	.	gene_id "ENSG00000160226.10"; transcript_id "ENST00000397956.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf2-003"; level 2; havana_gene "OTTHUMG00000086909.1"; havana_transcript "OTTHUMT00000195800.1";
chr21	HAVANA	transcript	45751845	45753347	.	-	.	gene_id "ENSG00000160226.10"; transcript_id "ENST00000478674.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C21orf2-007"; level 2; havana_gene "OTTHUMG00000086909.1"; havana_transcript "OTTHUMT00000195804.1";
chr21	HAVANA	transcript	45751117	45755734	.	+	.	gene_id "ENSG00000184441.4"; transcript_id "ENST00000448927.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001062.7"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001062.7-001"; level 2; havana_gene "OTTHUMG00000086919.1"; havana_transcript "OTTHUMT00000195837.1";
chr21	ENSEMBL	transcript	45751119	45751543	.	+	.	gene_id "ENSG00000255902.1"; transcript_id "ENST00000333748.3"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AP001062.1"; transcript_type "pseudogene"; transcript_status "NOVEL"; transcript_name "AP001062.1-201"; level 3;
chr21	HAVANA	transcript	45759259	45760353	.	+	.	gene_id "ENSG00000232969.1"; transcript_id "ENST00000426029.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001062.9"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001062.9-001"; level 2; havana_gene "OTTHUMG00000086923.1"; havana_transcript "OTTHUMT00000195846.1";
chr21	HAVANA	transcript	45770046	45862964	.	+	.	gene_id "ENSG00000142185.11"; transcript_id "ENST00000300482.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRPM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRPM2-004"; level 2; tag "CCDS"; ccdsid "CCDS13710.1"; havana_gene "OTTHUMG00000040840.3"; havana_transcript "OTTHUMT00000195849.1";
chr21	HAVANA	transcript	45770187	45786644	.	+	.	gene_id "ENSG00000142185.11"; transcript_id "ENST00000431901.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRPM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRPM2-006"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000040840.3"; havana_transcript "OTTHUMT00000195851.1";
chr21	HAVANA	transcript	45773139	45862964	.	+	.	gene_id "ENSG00000142185.11"; transcript_id "ENST00000397928.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRPM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRPM2-001"; level 2; tag "CCDS"; ccdsid "CCDS13710.1"; havana_gene "OTTHUMG00000040840.3"; havana_transcript "OTTHUMT00000098086.1";
chr21	HAVANA	transcript	45773571	45862241	.	+	.	gene_id "ENSG00000142185.11"; transcript_id "ENST00000397932.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRPM2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "TRPM2-007"; level 2; havana_gene "OTTHUMG00000040840.3"; havana_transcript "OTTHUMT00000339787.1";
chr21	HAVANA	transcript	45773571	45862964	.	+	.	gene_id "ENSG00000142185.11"; transcript_id "ENST00000300481.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRPM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRPM2-002"; level 2; tag "non_canonical_TEC"; havana_gene "OTTHUMG00000040840.3"; havana_transcript "OTTHUMT00000098087.1";
chr21	HAVANA	transcript	45789004	45862964	.	+	.	gene_id "ENSG00000142185.11"; transcript_id "ENST00000498430.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRPM2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TRPM2-005"; level 2; havana_gene "OTTHUMG00000040840.3"; havana_transcript "OTTHUMT00000195850.1";
chr21	ENSEMBL	transcript	45844752	45862527	.	+	.	gene_id "ENSG00000142185.11"; transcript_id "ENST00000540347.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRPM2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TRPM2-201"; level 3; havana_gene "OTTHUMG00000040840.3";
chr21	HAVANA	transcript	45845439	45861757	.	+	.	gene_id "ENSG00000142185.11"; transcript_id "ENST00000490982.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TRPM2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "TRPM2-003"; level 2; havana_gene "OTTHUMG00000040840.3"; havana_transcript "OTTHUMT00000098088.2";
chr21	HAVANA	transcript	45834473	45845155	.	-	.	gene_id "ENSG00000230061.1"; transcript_id "ENST00000423310.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP001065.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001065.2-001"; level 2; havana_gene "OTTHUMG00000040845.2"; havana_transcript "OTTHUMT00000098093.2";
chr21	HAVANA	transcript	45834478	45836623	.	-	.	gene_id "ENSG00000230061.1"; transcript_id "ENST00000456880.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP001065.2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001065.2-002"; level 2; havana_gene "OTTHUMG00000040845.2"; havana_transcript "OTTHUMT00000195847.1";
chr21	HAVANA	transcript	45870869	45875167	.	-	.	gene_id "ENSG00000229356.1"; transcript_id "ENST00000426578.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001065.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001065.3-001"; level 2; havana_gene "OTTHUMG00000040842.1"; havana_transcript "OTTHUMT00000098090.1";
chr21	HAVANA	transcript	45875369	45878739	.	+	.	gene_id "ENSG00000160233.5"; transcript_id "ENST00000291592.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LRRC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LRRC3-001"; level 2; tag "CCDS"; ccdsid "CCDS13711.1"; havana_gene "OTTHUMG00000040847.3"; havana_transcript "OTTHUMT00000098095.3";
chr21	ENSEMBL	transcript	45875393	45878589	.	+	.	gene_id "ENSG00000160233.5"; transcript_id "ENST00000471776.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LRRC3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LRRC3-201"; level 3; havana_gene "OTTHUMG00000040847.3";
chr21	HAVANA	transcript	45889812	45892399	.	-	.	gene_id "ENSG00000224747.1"; transcript_id "ENST00000443300.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001065.7"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001065.7-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000040846.1"; havana_transcript "OTTHUMT00000098094.1";
chr21	HAVANA	transcript	45892778	45893622	.	+	.	gene_id "ENSG00000223431.1"; transcript_id "ENST00000443620.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001065.8"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001065.8-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000040843.1"; havana_transcript "OTTHUMT00000098091.1";
chr21	HAVANA	transcript	45893606	45894980	.	-	.	gene_id "ENSG00000227999.1"; transcript_id "ENST00000445440.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001065.6"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001065.6-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000040844.2"; havana_transcript "OTTHUMT00000098092.2";
chr21	ENSEMBL	transcript	45894981	45895050	.	-	.	gene_id "ENSG00000243357.1"; transcript_id "ENST00000496885.1"; gene_type "Mt_tRNA_pseudogene"; gene_status "NOVEL"; gene_name "AP001065.1"; transcript_type "Mt_tRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AP001065.1-201"; level 3;
chr21	HAVANA	transcript	45905460	45910171	.	+	.	gene_id "ENSG00000228709.1"; transcript_id "ENST00000449713.1"; gene_type "lincRNA"; gene_status "PUTATIVE"; gene_name "AP001065.15"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001065.15-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000086925.1"; havana_transcript "OTTHUMT00000195852.1";
chr21	HAVANA	transcript	45917775	46131495	.	-	.	gene_id "ENSG00000175894.9"; transcript_id "ENST00000323084.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TSPEAR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TSPEAR-001"; level 2; tag "CCDS"; ccdsid "CCDS13712.1"; havana_gene "OTTHUMG00000041215.2"; havana_transcript "OTTHUMT00000098761.1";
chr21	ENSEMBL	transcript	45918981	46131462	.	-	.	gene_id "ENSG00000175894.9"; transcript_id "ENST00000397918.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TSPEAR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TSPEAR-202"; level 3; havana_gene "OTTHUMG00000041215.2";
chr21	HAVANA	transcript	45928390	45993693	.	-	.	gene_id "ENSG00000175894.9"; transcript_id "ENST00000397916.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TSPEAR"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "TSPEAR-002"; level 2; havana_gene "OTTHUMG00000041215.2"; havana_transcript "OTTHUMT00000195865.1";
chr21	ENSEMBL	transcript	45928752	46131495	.	-	.	gene_id "ENSG00000175894.9"; transcript_id "ENST00000341581.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "TSPEAR"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "TSPEAR-201"; level 3; havana_gene "OTTHUMG00000041215.2";
chr21	HAVANA	transcript	45926690	45935738	.	+	.	gene_id "ENSG00000235890.1"; transcript_id "ENST00000451035.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001066.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001066.10-001"; level 2; havana_gene "OTTHUMG00000041216.2"; havana_transcript "OTTHUMT00000098762.2";
chr21	HAVANA	transcript	45930569	45935506	.	+	.	gene_id "ENSG00000235890.1"; transcript_id "ENST00000430181.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001066.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001066.10-002"; level 2; havana_gene "OTTHUMG00000041216.2"; havana_transcript "OTTHUMT00000098763.1";
chr21	HAVANA	transcript	45937099	45938639	.	+	.	gene_id "ENSG00000182912.6"; transcript_id "ENST00000330490.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf90"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf90-001"; level 2; havana_gene "OTTHUMG00000041217.4"; havana_transcript "OTTHUMT00000098764.1";
chr21	HAVANA	transcript	45937500	45940713	.	+	.	gene_id "ENSG00000182912.6"; transcript_id "ENST00000354333.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf90"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf90-002"; level 2; havana_gene "OTTHUMG00000041217.4"; havana_transcript "OTTHUMT00000098765.4";
chr21	HAVANA	transcript	45937503	45945835	.	+	.	gene_id "ENSG00000182912.6"; transcript_id "ENST00000465978.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf90"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf90-003"; level 2; havana_gene "OTTHUMG00000041217.4"; havana_transcript "OTTHUMT00000195867.1";
chr21	HAVANA	transcript	45958864	45960078	.	-	.	gene_id "ENSG00000215455.3"; transcript_id "ENST00000400375.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-1-001"; level 2; tag "CCDS"; ccdsid "CCDS42954.1"; havana_gene "OTTHUMG00000057627.1"; havana_transcript "OTTHUMT00000128030.1";
chr21	ENSEMBL	transcript	45959152	45960033	.	-	.	gene_id "ENSG00000215455.3"; transcript_id "ENST00000545982.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-1-201"; level 3; havana_gene "OTTHUMG00000057627.1";
chr21	HAVANA	transcript	45970240	45971388	.	-	.	gene_id "ENSG00000205445.3"; transcript_id "ENST00000391621.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-2-001"; level 2; tag "CCDS"; ccdsid "CCDS42955.1"; havana_gene "OTTHUMG00000057625.1"; havana_transcript "OTTHUMT00000128027.1";
chr21	HAVANA	transcript	45970318	45971388	.	-	.	gene_id "ENSG00000205445.3"; transcript_id "ENST00000498210.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KRTAP10-2-002"; level 2; havana_gene "OTTHUMG00000057625.1"; havana_transcript "OTTHUMT00000128028.1";
chr21	HAVANA	transcript	45977673	45978643	.	-	.	gene_id "ENSG00000212935.1"; transcript_id "ENST00000391620.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-3-001"; level 2; tag "CCDS"; ccdsid "CCDS42956.1"; havana_gene "OTTHUMG00000057628.1"; havana_transcript "OTTHUMT00000128031.1";
chr21	HAVANA	transcript	45993606	45994987	.	+	.	gene_id "ENSG00000215454.3"; transcript_id "ENST00000400374.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-4-001"; level 2; tag "CCDS"; ccdsid "CCDS42957.1"; havana_gene "OTTHUMG00000057641.1"; havana_transcript "OTTHUMT00000128045.1";
chr21	ENSEMBL	transcript	45993624	45994841	.	+	.	gene_id "ENSG00000215454.3"; transcript_id "ENST00000334871.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-4-201"; level 3; havana_gene "OTTHUMG00000057641.1";
chr21	HAVANA	transcript	45999332	46000481	.	-	.	gene_id "ENSG00000241123.1"; transcript_id "ENST00000400372.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-5"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-5-001"; level 2; tag "CCDS"; ccdsid "CCDS42958.1"; havana_gene "OTTHUMG00000057638.1"; havana_transcript "OTTHUMT00000128042.1";
chr21	HAVANA	transcript	46011149	46012386	.	-	.	gene_id "ENSG00000188155.8"; transcript_id "ENST00000400368.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-6"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-6-001"; level 2; tag "CCDS"; ccdsid "CCDS42959.1"; havana_gene "OTTHUMG00000057634.1"; havana_transcript "OTTHUMT00000128037.1";
chr21	HAVANA	transcript	46020497	46022091	.	+	.	gene_id "ENSG00000205441.4"; transcript_id "ENST00000380102.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-7"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-7-001"; level 2; havana_gene "OTTHUMG00000057635.1"; havana_transcript "OTTHUMT00000128038.1";
chr21	ENSEMBL	transcript	46020522	46021649	.	+	.	gene_id "ENSG00000256212.1"; transcript_id "ENST00000339001.5"; gene_type "pseudogene"; gene_status "NOVEL"; gene_name "AL773602.1"; transcript_type "pseudogene"; transcript_status "NOVEL"; transcript_name "AL773602.1-201"; level 3;
chr21	HAVANA	transcript	46031996	46032871	.	+	.	gene_id "ENSG00000187766.1"; transcript_id "ENST00000334662.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-8"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-8-001"; level 2; tag "CCDS"; ccdsid "CCDS13713.1"; havana_gene "OTTHUMG00000057632.1"; havana_transcript "OTTHUMT00000128035.1";
chr21	HAVANA	transcript	46047040	46048294	.	+	.	gene_id "ENSG00000221837.4"; transcript_id "ENST00000397911.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-9"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-9-001"; level 2; tag "CCDS"; ccdsid "CCDS42961.1"; havana_gene "OTTHUMG00000057637.1"; havana_transcript "OTTHUMT00000128040.1";
chr21	HAVANA	transcript	46047040	46048210	.	+	.	gene_id "ENSG00000221837.4"; transcript_id "ENST00000484861.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "KRTAP10-9-002"; level 2; havana_gene "OTTHUMG00000057637.1"; havana_transcript "OTTHUMT00000128041.1";
chr21	HAVANA	transcript	46057273	46058370	.	+	.	gene_id "ENSG00000221859.1"; transcript_id "ENST00000380095.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-10"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-10-001"; level 2; tag "CCDS"; ccdsid "CCDS33585.1"; havana_gene "OTTHUMG00000057631.1"; havana_transcript "OTTHUMT00000128034.1";
chr21	HAVANA	transcript	46066331	46067564	.	+	.	gene_id "ENSG00000243489.2"; transcript_id "ENST00000334670.8"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-11"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-11-001"; level 2; tag "CCDS"; ccdsid "CCDS42962.1"; havana_gene "OTTHUMG00000057626.1"; havana_transcript "OTTHUMT00000128029.1";
chr21	ENSEMBL	transcript	46067057	46078187	.	+	.	gene_id "ENSG00000205439.7"; transcript_id "ENST00000546091.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP12-3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP12-3-201"; level 3; havana_gene "OTTHUMG00000057630.1";
chr21	HAVANA	transcript	46077849	46078258	.	+	.	gene_id "ENSG00000205439.7"; transcript_id "ENST00000397907.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP12-3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP12-3-001"; level 2; tag "CCDS"; ccdsid "CCDS42964.1"; havana_gene "OTTHUMG00000057630.1"; havana_transcript "OTTHUMT00000128033.1";
chr21	HAVANA	transcript	46074130	46074576	.	-	.	gene_id "ENSG00000212933.1"; transcript_id "ENST00000391618.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP12-4"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP12-4-001"; level 2; tag "CCDS"; ccdsid "CCDS42963.1"; havana_gene "OTTHUMG00000057633.1"; havana_transcript "OTTHUMT00000128036.1";
chr21	HAVANA	transcript	46086106	46086844	.	-	.	gene_id "ENSG00000221864.3"; transcript_id "ENST00000360770.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP12-2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP12-2-001"; level 2; tag "CCDS"; ccdsid "CCDS42965.1"; havana_gene "OTTHUMG00000057636.1"; havana_transcript "OTTHUMT00000128039.1";
chr21	ENSEMBL	transcript	46086363	46086803	.	-	.	gene_id "ENSG00000221864.3"; transcript_id "ENST00000539483.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP12-2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP12-2-201"; level 3; tag "CCDS"; ccdsid "CCDS42965.1"; havana_gene "OTTHUMG00000057636.1";
chr21	HAVANA	transcript	46095785	46098003	.	-	.	gene_id "ENSG00000229880.1"; transcript_id "ENST00000435590.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "IMMTP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "IMMTP1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000086935.1"; havana_transcript "OTTHUMT00000195868.1";
chr21	HAVANA	transcript	46101491	46102078	.	-	.	gene_id "ENSG00000187175.5"; transcript_id "ENST00000391617.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP12-1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP12-1-001"; level 2; tag "CCDS"; ccdsid "CCDS42966.1"; havana_gene "OTTHUMG00000057639.1"; havana_transcript "OTTHUMT00000128043.1";
chr21	HAVANA	transcript	46117087	46117959	.	+	.	gene_id "ENSG00000189169.5"; transcript_id "ENST00000400365.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-12"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-12-001"; level 2; tag "CCDS"; ccdsid "CCDS42967.1"; havana_gene "OTTHUMG00000057629.1"; havana_transcript "OTTHUMT00000128032.1";
chr21	ENSEMBL	transcript	46117342	46117722	.	+	.	gene_id "ENSG00000189169.5"; transcript_id "ENST00000452870.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "KRTAP10-12"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "KRTAP10-12-201"; level 3; havana_gene "OTTHUMG00000057629.1";
chr21	HAVANA	transcript	46122136	46122706	.	+	.	gene_id "ENSG00000236382.1"; transcript_id "ENST00000412914.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "KRTAP10-13P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "KRTAP10-13P-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000057640.1"; havana_transcript "OTTHUMT00000128044.1";
chr21	HAVANA	transcript	46188955	46195351	.	-	.	gene_id "ENSG00000184787.14"; transcript_id "ENST00000481546.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2G2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UBE2G2-003"; level 2; havana_gene "OTTHUMG00000089179.5"; havana_transcript "OTTHUMT00000202649.1";
chr21	HAVANA	transcript	46188955	46221934	.	-	.	gene_id "ENSG00000184787.14"; transcript_id "ENST00000345496.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2G2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "UBE2G2-001"; level 2; tag "CCDS"; ccdsid "CCDS13714.1"; havana_gene "OTTHUMG00000089179.5"; havana_transcript "OTTHUMT00000202647.2";
chr21	HAVANA	transcript	46190846	46221734	.	-	.	gene_id "ENSG00000184787.14"; transcript_id "ENST00000497630.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2G2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UBE2G2-004"; level 2; havana_gene "OTTHUMG00000089179.5"; havana_transcript "OTTHUMT00000202650.1";
chr21	HAVANA	transcript	46190887	46221694	.	-	.	gene_id "ENSG00000184787.14"; transcript_id "ENST00000477954.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2G2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UBE2G2-008"; level 2; havana_gene "OTTHUMG00000089179.5"; havana_transcript "OTTHUMT00000202654.1";
chr21	HAVANA	transcript	46191194	46221738	.	-	.	gene_id "ENSG00000184787.14"; transcript_id "ENST00000491513.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2G2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UBE2G2-011"; level 2; havana_gene "OTTHUMG00000089179.5"; havana_transcript "OTTHUMT00000354363.1";
chr21	HAVANA	transcript	46191210	46221689	.	-	.	gene_id "ENSG00000184787.14"; transcript_id "ENST00000330942.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2G2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "UBE2G2-005"; level 2; tag "CCDS"; ccdsid "CCDS33586.1"; havana_gene "OTTHUMG00000089179.5"; havana_transcript "OTTHUMT00000202651.2";
chr21	HAVANA	transcript	46193463	46221741	.	-	.	gene_id "ENSG00000184787.14"; transcript_id "ENST00000478200.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2G2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "UBE2G2-010"; level 2; havana_gene "OTTHUMG00000089179.5"; havana_transcript "OTTHUMT00000354362.1";
chr21	HAVANA	transcript	46194446	46221719	.	-	.	gene_id "ENSG00000184787.14"; transcript_id "ENST00000497664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2G2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UBE2G2-012"; level 2; havana_gene "OTTHUMG00000089179.5"; havana_transcript "OTTHUMT00000354364.1";
chr21	HAVANA	transcript	46196749	46221716	.	-	.	gene_id "ENSG00000184787.14"; transcript_id "ENST00000462569.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2G2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UBE2G2-007"; level 2; havana_gene "OTTHUMG00000089179.5"; havana_transcript "OTTHUMT00000202653.1";
chr21	HAVANA	transcript	46197169	46221683	.	-	.	gene_id "ENSG00000184787.14"; transcript_id "ENST00000490450.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2G2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "UBE2G2-006"; level 2; havana_gene "OTTHUMG00000089179.5"; havana_transcript "OTTHUMT00000202652.1";
chr21	HAVANA	transcript	46197292	46221659	.	-	.	gene_id "ENSG00000184787.14"; transcript_id "ENST00000496395.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2G2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "UBE2G2-009"; level 2; tag "not_organism-supported"; havana_gene "OTTHUMG00000089179.5"; havana_transcript "OTTHUMT00000354353.2";
chr21	HAVANA	transcript	46219905	46221723	.	-	.	gene_id "ENSG00000184787.14"; transcript_id "ENST00000490091.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "UBE2G2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "UBE2G2-002"; level 2; havana_gene "OTTHUMG00000089179.5"; havana_transcript "OTTHUMT00000202648.1";
chr21	HAVANA	transcript	46191374	46226906	.	-	.	gene_id "ENSG00000184900.10"; transcript_id "ENST00000457036.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUMO3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SUMO3-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000090256.4"; havana_transcript "OTTHUMT00000334392.1";
chr21	HAVANA	transcript	46191374	46226927	.	-	.	gene_id "ENSG00000184900.10"; transcript_id "ENST00000427597.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUMO3"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "SUMO3-006"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000090256.4"; havana_transcript "OTTHUMT00000329238.1";
chr21	HAVANA	transcript	46225532	46238694	.	-	.	gene_id "ENSG00000184900.10"; transcript_id "ENST00000479153.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUMO3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SUMO3-003"; level 2; havana_gene "OTTHUMG00000090256.4"; havana_transcript "OTTHUMT00000206562.1";
chr21	HAVANA	transcript	46225532	46238044	.	-	.	gene_id "ENSG00000184900.10"; transcript_id "ENST00000332859.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUMO3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUMO3-001"; level 2; tag "CCDS"; ccdsid "CCDS33587.1"; havana_gene "OTTHUMG00000090256.4"; havana_transcript "OTTHUMT00000206560.1";
chr21	HAVANA	transcript	46225532	46237966	.	-	.	gene_id "ENSG00000184900.10"; transcript_id "ENST00000397898.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUMO3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "SUMO3-002"; level 2; havana_gene "OTTHUMG00000090256.4"; havana_transcript "OTTHUMT00000206561.1";
chr21	ENSEMBL	transcript	46226574	46237996	.	-	.	gene_id "ENSG00000184900.10"; transcript_id "ENST00000411651.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUMO3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SUMO3-201"; level 3; havana_gene "OTTHUMG00000090256.4";
chr21	HAVANA	transcript	46228186	46237883	.	-	.	gene_id "ENSG00000184900.10"; transcript_id "ENST00000397893.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUMO3"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SUMO3-005"; level 2; havana_gene "OTTHUMG00000090256.4"; havana_transcript "OTTHUMT00000206564.1";
chr21	HAVANA	transcript	46233425	46238020	.	-	.	gene_id "ENSG00000184900.10"; transcript_id "ENST00000466861.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SUMO3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "SUMO3-004"; level 2; havana_gene "OTTHUMG00000090256.4"; havana_transcript "OTTHUMT00000206563.1";
chr21	HAVANA	transcript	46222492	46224632	.	+	.	gene_id "ENSG00000236519.1"; transcript_id "ENST00000417820.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL773604.8"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL773604.8-001"; level 2; havana_gene "OTTHUMG00000090255.1"; havana_transcript "OTTHUMT00000206559.1";
chr21	HAVANA	transcript	46269500	46293624	.	-	.	gene_id "ENSG00000183255.6"; transcript_id "ENST00000397887.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PTTG1IP"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PTTG1IP-005"; level 2; havana_gene "OTTHUMG00000090254.1"; havana_transcript "OTTHUMT00000206557.1";
chr21	HAVANA	transcript	46269500	46293752	.	-	.	gene_id "ENSG00000183255.6"; transcript_id "ENST00000330938.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PTTG1IP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PTTG1IP-001"; level 2; tag "CCDS"; ccdsid "CCDS13715.1"; havana_gene "OTTHUMG00000090254.1"; havana_transcript "OTTHUMT00000206553.1";
chr21	ENSEMBL	transcript	46270581	46293606	.	-	.	gene_id "ENSG00000183255.6"; transcript_id "ENST00000445724.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PTTG1IP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PTTG1IP-202"; level 3; havana_gene "OTTHUMG00000090254.1";
chr21	ENSEMBL	transcript	46270925	46293650	.	-	.	gene_id "ENSG00000183255.6"; transcript_id "ENST00000423073.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PTTG1IP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PTTG1IP-201"; level 3; havana_gene "OTTHUMG00000090254.1";
chr21	HAVANA	transcript	46271322	46281848	.	-	.	gene_id "ENSG00000183255.6"; transcript_id "ENST00000397886.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PTTG1IP"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PTTG1IP-006"; level 2; havana_gene "OTTHUMG00000090254.1"; havana_transcript "OTTHUMT00000206558.1";
chr21	HAVANA	transcript	46275143	46285811	.	-	.	gene_id "ENSG00000183255.6"; transcript_id "ENST00000474737.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PTTG1IP"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PTTG1IP-004"; level 2; havana_gene "OTTHUMG00000090254.1"; havana_transcript "OTTHUMT00000206556.1";
chr21	HAVANA	transcript	46275153	46292947	.	-	.	gene_id "ENSG00000183255.6"; transcript_id "ENST00000494690.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PTTG1IP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PTTG1IP-002"; level 2; havana_gene "OTTHUMG00000090254.1"; havana_transcript "OTTHUMT00000206554.1";
chr21	HAVANA	transcript	46281089	46293583	.	-	.	gene_id "ENSG00000183255.6"; transcript_id "ENST00000480234.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PTTG1IP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PTTG1IP-003"; level 2; havana_gene "OTTHUMG00000090254.1"; havana_transcript "OTTHUMT00000206555.1";
chr21	HAVANA	transcript	46305868	46348753	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000355153.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITGB2-201"; level 2; tag "CCDS"; ccdsid "CCDS13716.1"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000206565.1";
chr21	HAVANA	transcript	46305868	46340875	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000498666.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ITGB2-007"; level 2; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000206571.1";
chr21	HAVANA	transcript	46305868	46330741	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000397852.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITGB2-005"; level 2; tag "CCDS"; ccdsid "CCDS13716.1"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000206569.1";
chr21	HAVANA	transcript	46305868	46348788	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000397850.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITGB2-002"; level 2; tag "CCDS"; ccdsid "CCDS13716.1"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000206566.2";
chr21	HAVANA	transcript	46305868	46331375	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000397857.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITGB2-202"; level 2; tag "CCDS"; ccdsid "CCDS13716.1"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000206568.1";
chr21	HAVANA	transcript	46305868	46313942	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000475170.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ITGB2-006"; level 2; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000206570.1";
chr21	HAVANA	transcript	46305868	46340770	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000397854.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "ITGB2-003"; level 2; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000206567.1";
chr21	HAVANA	transcript	46305871	46340965	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000302347.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITGB2-001"; level 2; tag "CCDS"; ccdsid "CCDS13716.1"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000206565.1";
chr21	HAVANA	transcript	46305871	46340790	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000523323.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ITGB2-013"; level 2; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000381333.1";
chr21	HAVANA	transcript	46306248	46309046	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000479202.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ITGB2-011"; level 2; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000206575.1";
chr21	ENSEMBL	transcript	46306273	46340784	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000545414.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITGB2-203"; level 3; havana_gene "OTTHUMG00000090257.6";
chr21	HAVANA	transcript	46318982	46330545	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000320216.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ITGB2-010"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000206574.5";
chr21	HAVANA	transcript	46321466	46340847	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000521987.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ITGB2-018"; level 2; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000381334.1";
chr21	HAVANA	transcript	46323280	46331092	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000523663.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITGB2-024"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "not_organism-supported"; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000381335.1";
chr21	HAVANA	transcript	46323299	46334198	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000522931.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITGB2-022"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000381336.1";
chr21	HAVANA	transcript	46323418	46348633	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000517563.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITGB2-015"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000381337.1";
chr21	HAVANA	transcript	46323423	46340857	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000522688.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ITGB2-017"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000381338.1";
chr21	HAVANA	transcript	46323430	46340842	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000520389.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ITGB2-020"; level 2; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000381339.1";
chr21	HAVANA	transcript	46326840	46340814	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000524251.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ITGB2-021"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000381340.1";
chr21	HAVANA	transcript	46326947	46341048	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000517819.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITGB2-016"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000381341.1";
chr21	HAVANA	transcript	46327902	46340811	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000397846.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "ITGB2-008"; level 2; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000206572.1";
chr21	HAVANA	transcript	46327902	46330656	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000479849.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ITGB2-009"; level 2; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000206573.1";
chr21	HAVANA	transcript	46329235	46330603	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000523126.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ITGB2-023"; level 2; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000381342.1";
chr21	HAVANA	transcript	46330199	46351904	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000521995.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ITGB2-014"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000381343.1";
chr21	HAVANA	transcript	46330236	46340842	.	-	.	gene_id "ENSG00000160255.11"; transcript_id "ENST00000518033.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ITGB2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "ITGB2-019"; level 2; havana_gene "OTTHUMG00000090257.6"; havana_transcript "OTTHUMT00000381344.1";
chr21	HAVANA	transcript	46340966	46349593	.	+	.	gene_id "ENSG00000227039.1"; transcript_id "ENST00000441379.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AL844908.5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL844908.5-001"; level 2; havana_gene "OTTHUMG00000090253.1"; havana_transcript "OTTHUMT00000206551.1";
chr21	HAVANA	transcript	46341241	46347943	.	+	.	gene_id "ENSG00000227039.1"; transcript_id "ENST00000429132.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AL844908.5"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL844908.5-002"; level 2; havana_gene "OTTHUMG00000090253.1"; havana_transcript "OTTHUMT00000206552.1";
chr21	ENSEMBL	transcript	46352729	46354888	.	-	.	gene_id "ENSG00000257100.1"; transcript_id "ENST00000543832.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AL844908.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AL844908.1-201"; level 3;
chr21	HAVANA	transcript	46352729	46359828	.	-	.	gene_id "ENSG00000183250.7"; transcript_id "ENST00000397841.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf67"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf67-002"; level 2; havana_gene "OTTHUMG00000090294.3"; havana_transcript "OTTHUMT00000206644.1";
chr21	HAVANA	transcript	46354640	46359760	.	-	.	gene_id "ENSG00000183250.7"; transcript_id "ENST00000330551.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf67"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf67-001"; level 2; havana_gene "OTTHUMG00000090294.3"; havana_transcript "OTTHUMT00000206643.3";
chr21	ENSEMBL	transcript	46355573	46359828	.	-	.	gene_id "ENSG00000183250.7"; transcript_id "ENST00000380070.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf67"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf67-201"; level 3; havana_gene "OTTHUMG00000090294.3";
chr21	HAVANA	transcript	46359925	46396904	.	+	.	gene_id "ENSG00000160256.8"; transcript_id "ENST00000291634.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf70"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf70-002"; level 2; tag "CCDS"; ccdsid "CCDS13718.1"; havana_gene "OTTHUMG00000090293.1"; havana_transcript "OTTHUMT00000206639.1";
chr21	HAVANA	transcript	46359927	46396904	.	+	.	gene_id "ENSG00000160256.8"; transcript_id "ENST00000397826.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf70"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf70-001"; level 2; havana_gene "OTTHUMG00000090293.1"; havana_transcript "OTTHUMT00000206638.1";
chr21	HAVANA	transcript	46359940	46389179	.	+	.	gene_id "ENSG00000160256.8"; transcript_id "ENST00000458015.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf70"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "C21orf70-003"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090293.1"; havana_transcript "OTTHUMT00000206640.1";
chr21	HAVANA	transcript	46378161	46396888	.	+	.	gene_id "ENSG00000160256.8"; transcript_id "ENST00000479127.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf70"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf70-005"; level 2; havana_gene "OTTHUMG00000090293.1"; havana_transcript "OTTHUMT00000206642.1";
chr21	HAVANA	transcript	46392971	46396888	.	+	.	gene_id "ENSG00000160256.8"; transcript_id "ENST00000485207.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf70"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "C21orf70-004"; level 2; havana_gene "OTTHUMG00000090293.1"; havana_transcript "OTTHUMT00000206641.1";
chr21	HAVANA	transcript	46409779	46414001	.	-	.	gene_id "ENSG00000234880.1"; transcript_id "ENST00000434081.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00163"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00163-001"; level 2; havana_gene "OTTHUMG00000090296.1"; havana_transcript "OTTHUMT00000206655.1";
chr21	HAVANA	transcript	46409779	46413984	.	-	.	gene_id "ENSG00000234880.1"; transcript_id "ENST00000439088.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00163"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00163-002"; level 2; havana_gene "OTTHUMG00000090296.1"; havana_transcript "OTTHUMT00000206656.1";
chr21	HAVANA	transcript	46419122	46424642	.	-	.	gene_id "ENSG00000224930.2"; transcript_id "ENST00000422199.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "NCRNA00162"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00162-001"; level 2; havana_gene "OTTHUMG00000090292.1"; havana_transcript "OTTHUMT00000206637.1";
chr21	HAVANA	transcript	46491648	46494080	.	-	.	gene_id "ENSG00000235374.1"; transcript_id "ENST00000429427.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "C21orf122"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf122-001"; level 2; havana_gene "OTTHUMG00000090297.2"; havana_transcript "OTTHUMT00000206657.2";
chr21	HAVANA	transcript	46491743	46492154	.	-	.	gene_id "ENSG00000235374.1"; transcript_id "ENST00000415143.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "C21orf122"; transcript_type "transcribed_processed_pseudogene"; transcript_status "KNOWN"; transcript_name "C21orf122-002"; level 1; ont "PGO:0000004"; ont "PGO:0000019"; tag "pseudo_consens"; havana_gene "OTTHUMG00000090297.2"; havana_transcript "OTTHUMT00000343731.1";
chr21	HAVANA	transcript	46493768	46557241	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000462214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADARB1-007"; level 2; havana_gene "OTTHUMG00000090295.4"; havana_transcript "OTTHUMT00000206651.1";
chr21	ENSEMBL	transcript	46494484	46566210	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000327861.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADARB1-201"; level 3; havana_gene "OTTHUMG00000090295.4";
chr21	HAVANA	transcript	46494484	46566210	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000460734.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADARB1-006"; level 2; havana_gene "OTTHUMG00000090295.4"; havana_transcript "OTTHUMT00000206650.1";
chr21	ENSEMBL	transcript	46494493	46646478	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000539173.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADARB1-203"; level 3; tag "CCDS"; ccdsid "CCDS33589.1"; havana_gene "OTTHUMG00000090295.4";
chr21	ENSEMBL	transcript	46494493	46646478	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000539917.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADARB1-204"; level 3; havana_gene "OTTHUMG00000090295.4";
chr21	HAVANA	transcript	46494515	46646475	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000492414.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ADARB1-002"; level 2; tag "CCDS"; ccdsid "CCDS33590.1"; havana_gene "OTTHUMG00000090295.4"; havana_transcript "OTTHUMT00000206646.3";
chr21	HAVANA	transcript	46494515	46646475	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000389863.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADARB1-005"; level 2; tag "CCDS"; ccdsid "CCDS42970.1"; havana_gene "OTTHUMG00000090295.4"; havana_transcript "OTTHUMT00000206649.1";
chr21	HAVANA	transcript	46494515	46646475	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000496664.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ADARB1-003"; level 2; tag "CCDS"; ccdsid "CCDS33589.1"; havana_gene "OTTHUMG00000090295.4"; havana_transcript "OTTHUMT00000206647.3";
chr21	HAVANA	transcript	46494515	46646475	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000348831.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADARB1-011"; level 2; tag "CCDS"; ccdsid "CCDS33590.1"; havana_gene "OTTHUMG00000090295.4"; havana_transcript "OTTHUMT00000269059.1";
chr21	ENSEMBL	transcript	46494515	46646474	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000437626.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADARB1-202"; level 3; havana_gene "OTTHUMG00000090295.4";
chr21	HAVANA	transcript	46494515	46646475	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000389861.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "ADARB1-001"; level 2; havana_gene "OTTHUMG00000090295.4"; havana_transcript "OTTHUMT00000206645.3";
chr21	HAVANA	transcript	46540815	46596041	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000449478.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADARB1-008"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090295.4"; havana_transcript "OTTHUMT00000206652.1";
chr21	HAVANA	transcript	46548368	46591674	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000464215.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "ADARB1-009"; level 2; havana_gene "OTTHUMG00000090295.4"; havana_transcript "OTTHUMT00000206653.1";
chr21	HAVANA	transcript	46591557	46646475	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000360697.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "ADARB1-004"; level 2; tag "CCDS"; ccdsid "CCDS33589.1"; havana_gene "OTTHUMG00000090295.4"; havana_transcript "OTTHUMT00000206648.2";
chr21	HAVANA	transcript	46596325	46597462	.	+	.	gene_id "ENSG00000197381.9"; transcript_id "ENST00000481022.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "ADARB1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "ADARB1-010"; level 2; havana_gene "OTTHUMG00000090295.4"; havana_transcript "OTTHUMT00000206654.1";
chr21	HAVANA	transcript	46654267	46678645	.	+	.	gene_id "ENSG00000182586.2"; transcript_id "ENST00000328344.2"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf89"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf89-001"; level 2; havana_gene "OTTHUMG00000084875.1"; havana_transcript "OTTHUMT00000192579.1";
chr21	HAVANA	transcript	46683843	46707813	.	-	.	gene_id "ENSG00000186866.12"; transcript_id "ENST00000349485.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POFUT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POFUT2-003"; level 2; tag "CCDS"; ccdsid "CCDS13719.1"; havana_gene "OTTHUMG00000084874.5"; havana_transcript "OTTHUMT00000192573.2";
chr21	HAVANA	transcript	46683843	46707813	.	-	.	gene_id "ENSG00000186866.12"; transcript_id "ENST00000334538.9"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POFUT2"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "POFUT2-002"; level 2; havana_gene "OTTHUMG00000084874.5"; havana_transcript "OTTHUMT00000192572.4";
chr21	HAVANA	transcript	46683843	46707813	.	-	.	gene_id "ENSG00000186866.12"; transcript_id "ENST00000331343.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POFUT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "POFUT2-001"; level 2; tag "CCDS"; ccdsid "CCDS13721.1"; havana_gene "OTTHUMG00000084874.5"; havana_transcript "OTTHUMT00000192571.3";
chr21	HAVANA	transcript	46683843	46703409	.	-	.	gene_id "ENSG00000186866.12"; transcript_id "ENST00000471540.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POFUT2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POFUT2-004"; level 2; havana_gene "OTTHUMG00000084874.5"; havana_transcript "OTTHUMT00000192574.1";
chr21	HAVANA	transcript	46685289	46686290	.	-	.	gene_id "ENSG00000186866.12"; transcript_id "ENST00000485190.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POFUT2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "POFUT2-012"; level 2; havana_gene "OTTHUMG00000084874.5"; havana_transcript "OTTHUMT00000206633.1";
chr21	HAVANA	transcript	46685315	46690009	.	-	.	gene_id "ENSG00000186866.12"; transcript_id "ENST00000460932.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POFUT2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "POFUT2-011"; level 2; havana_gene "OTTHUMG00000084874.5"; havana_transcript "OTTHUMT00000206632.1";
chr21	HAVANA	transcript	46687441	46690006	.	-	.	gene_id "ENSG00000186866.12"; transcript_id "ENST00000463917.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POFUT2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "POFUT2-010"; level 2; havana_gene "OTTHUMG00000084874.5"; havana_transcript "OTTHUMT00000206631.1";
chr21	HAVANA	transcript	46687613	46705606	.	-	.	gene_id "ENSG00000186866.12"; transcript_id "ENST00000451615.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POFUT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "POFUT2-008"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000084874.5"; havana_transcript "OTTHUMT00000192578.1";
chr21	HAVANA	transcript	46689756	46707811	.	-	.	gene_id "ENSG00000186866.12"; transcript_id "ENST00000493524.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POFUT2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POFUT2-007"; level 2; havana_gene "OTTHUMG00000084874.5"; havana_transcript "OTTHUMT00000192577.2";
chr21	HAVANA	transcript	46689766	46707799	.	-	.	gene_id "ENSG00000186866.12"; transcript_id "ENST00000468360.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POFUT2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POFUT2-006"; level 2; havana_gene "OTTHUMG00000084874.5"; havana_transcript "OTTHUMT00000192576.1";
chr21	HAVANA	transcript	46702284	46707806	.	-	.	gene_id "ENSG00000186866.12"; transcript_id "ENST00000493811.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POFUT2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "POFUT2-005"; level 2; havana_gene "OTTHUMG00000084874.5"; havana_transcript "OTTHUMT00000192575.1";
chr21	HAVANA	transcript	46705398	46707807	.	-	.	gene_id "ENSG00000186866.12"; transcript_id "ENST00000476653.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "POFUT2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "POFUT2-009"; level 2; havana_gene "OTTHUMG00000084874.5"; havana_transcript "OTTHUMT00000206630.1";
chr21	HAVANA	transcript	46707967	46710493	.	+	.	gene_id "ENSG00000215447.3"; transcript_id "ENST00000454115.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "BX322557.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BX322557.10-001"; level 2; havana_gene "OTTHUMG00000090398.1"; havana_transcript "OTTHUMT00000206806.1";
chr21	HAVANA	transcript	46707977	46711653	.	+	.	gene_id "ENSG00000215447.3"; transcript_id "ENST00000400362.2"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "BX322557.10"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "BX322557.10-002"; level 2; havana_gene "OTTHUMG00000090398.1"; havana_transcript "OTTHUMT00000206807.1";
chr21	HAVANA	transcript	46713200	46717269	.	+	.	gene_id "ENSG00000223768.1"; transcript_id "ENST00000433465.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "NCRNA00205"; transcript_type "non_coding"; transcript_status "KNOWN"; transcript_name "NCRNA00205-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000090403.2"; havana_transcript "OTTHUMT00000206823.2";
chr21	HAVANA	transcript	46720160	46725172	.	-	.	gene_id "ENSG00000184274.3"; transcript_id "ENST00000441947.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf93"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "C21orf93-001"; level 2; havana_gene "OTTHUMG00000090409.1"; havana_transcript "OTTHUMT00000206835.1";
chr21	HAVANA	transcript	46756622	46758580	.	+	.	gene_id "ENSG00000229382.1"; transcript_id "ENST00000445242.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "BX322557.13"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BX322557.13-001"; level 2; havana_gene "OTTHUMG00000090402.1"; havana_transcript "OTTHUMT00000206822.1";
chr21	HAVANA	transcript	46758505	46761905	.	-	.	gene_id "ENSG00000237664.1"; transcript_id "ENST00000416722.1"; gene_type "processed_transcript"; gene_status "KNOWN"; gene_name "C21orf111"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "C21orf111-001"; level 2; havana_gene "OTTHUMG00000090404.1"; havana_transcript "OTTHUMT00000206824.1";
chr21	HAVANA	transcript	46796106	46796297	.	-	.	gene_id "ENSG00000228930.1"; transcript_id "ENST00000429327.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "BX322559.2"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "BX322559.2-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000090406.1"; havana_transcript "OTTHUMT00000206826.1";
chr21	HAVANA	transcript	46798116	46799539	.	-	.	gene_id "ENSG00000228355.1"; transcript_id "ENST00000456613.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "BX322559.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BX322559.3-002"; level 2; havana_gene "OTTHUMG00000090400.1"; havana_transcript "OTTHUMT00000206820.1";
chr21	HAVANA	transcript	46798251	46799550	.	-	.	gene_id "ENSG00000228355.1"; transcript_id "ENST00000416468.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "BX322559.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BX322559.3-001"; level 2; havana_gene "OTTHUMG00000090400.1"; havana_transcript "OTTHUMT00000206819.1";
chr21	HAVANA	transcript	46825052	46933634	.	+	.	gene_id "ENSG00000182871.9"; transcript_id "ENST00000400337.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL18A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL18A1-002"; level 2; havana_gene "OTTHUMG00000090407.4"; havana_transcript "OTTHUMT00000206828.1";
chr21	ENSEMBL	transcript	46825088	46933633	.	+	.	gene_id "ENSG00000182871.9"; transcript_id "ENST00000400347.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL18A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL18A1-202"; level 3; havana_gene "OTTHUMG00000090407.4";
chr21	HAVANA	transcript	46875403	46933634	.	+	.	gene_id "ENSG00000182871.9"; transcript_id "ENST00000355480.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL18A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL18A1-201"; level 2; havana_gene "OTTHUMG00000090407.4"; havana_transcript "OTTHUMT00000206827.1";
chr21	HAVANA	transcript	46875424	46933633	.	+	.	gene_id "ENSG00000182871.9"; transcript_id "ENST00000359759.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL18A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL18A1-001"; level 2; havana_gene "OTTHUMG00000090407.4"; havana_transcript "OTTHUMT00000206827.1";
chr21	ENSEMBL	transcript	46875445	46933633	.	+	.	gene_id "ENSG00000182871.9"; transcript_id "ENST00000539645.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL18A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL18A1-203"; level 3; havana_gene "OTTHUMG00000090407.4";
chr21	HAVANA	transcript	46910189	46933634	.	+	.	gene_id "ENSG00000182871.9"; transcript_id "ENST00000342220.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL18A1"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "COL18A1-003"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000090407.4"; havana_transcript "OTTHUMT00000206829.1";
chr21	HAVANA	transcript	46913109	46917726	.	+	.	gene_id "ENSG00000182871.9"; transcript_id "ENST00000459895.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL18A1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "COL18A1-006"; level 2; havana_gene "OTTHUMG00000090407.4"; havana_transcript "OTTHUMT00000206832.1";
chr21	HAVANA	transcript	46925272	46932177	.	+	.	gene_id "ENSG00000182871.9"; transcript_id "ENST00000423214.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL18A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "COL18A1-005"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090407.4"; havana_transcript "OTTHUMT00000206831.1";
chr21	HAVANA	transcript	46925933	46932481	.	+	.	gene_id "ENSG00000182871.9"; transcript_id "ENST00000473212.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL18A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "COL18A1-004"; level 2; havana_gene "OTTHUMG00000090407.4"; havana_transcript "OTTHUMT00000206830.1";
chr21	HAVANA	transcript	46827301	46829980	.	-	.	gene_id "ENSG00000224574.1"; transcript_id "ENST00000446475.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "BX322563.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "BX322563.3-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000137616.1"; havana_transcript "OTTHUMT00000269032.1";
chr21	HAVANA	transcript	46839631	46844985	.	-	.	gene_id "ENSG00000183535.5"; transcript_id "ENST00000485206.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "NCRNA00175"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00175-001"; level 2; havana_gene "OTTHUMG00000090401.3"; havana_transcript "OTTHUMT00000206821.2";
chr21	HAVANA	transcript	46839631	46844955	.	-	.	gene_id "ENSG00000183535.5"; transcript_id "ENST00000397787.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "NCRNA00175"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "NCRNA00175-002"; level 2; havana_gene "OTTHUMG00000090401.3"; havana_transcript "OTTHUMT00000269033.2";
chr21	HAVANA	transcript	46913486	46951455	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000417954.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC19A1-003"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000090397.4"; havana_transcript "OTTHUMT00000206798.1";
chr21	ENSEMBL	transcript	46916249	46962351	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000380014.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC19A1-201"; level 3; havana_gene "OTTHUMG00000090397.4";
chr21	HAVANA	transcript	46922427	46924035	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000461785.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC19A1-004"; level 2; havana_gene "OTTHUMG00000090397.4"; havana_transcript "OTTHUMT00000206799.1";
chr21	HAVANA	transcript	46932276	46935047	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000468508.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC19A1-011"; level 2; havana_gene "OTTHUMG00000090397.4"; havana_transcript "OTTHUMT00000356363.2";
chr21	HAVANA	transcript	46932739	46935682	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000460174.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC19A1-010"; level 2; havana_gene "OTTHUMG00000090397.4"; havana_transcript "OTTHUMT00000206805.1";
chr21	HAVANA	transcript	46933690	46962385	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000311124.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC19A1-001"; level 2; tag "CCDS"; ccdsid "CCDS13725.1"; havana_gene "OTTHUMG00000090397.4"; havana_transcript "OTTHUMT00000206796.1";
chr21	HAVANA	transcript	46934629	46962385	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000380010.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "SLC19A1-002"; level 2; havana_gene "OTTHUMG00000090397.4"; havana_transcript "OTTHUMT00000206797.1";
chr21	ENSEMBL	transcript	46935432	46954529	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000485649.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC19A1-202"; level 3; havana_gene "OTTHUMG00000090397.4";
chr21	HAVANA	transcript	46951332	46954620	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000477688.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC19A1-009"; level 2; havana_gene "OTTHUMG00000090397.4"; havana_transcript "OTTHUMT00000206804.1";
chr21	HAVANA	transcript	46951705	46961752	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000427839.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC19A1-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090397.4"; havana_transcript "OTTHUMT00000206802.1";
chr21	HAVANA	transcript	46951788	46964314	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000443742.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC19A1-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090397.4"; havana_transcript "OTTHUMT00000206800.1";
chr21	HAVANA	transcript	46955898	46957847	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000486303.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "SLC19A1-008"; level 2; havana_gene "OTTHUMG00000090397.4"; havana_transcript "OTTHUMT00000206803.1";
chr21	HAVANA	transcript	46957692	46964316	.	-	.	gene_id "ENSG00000173638.12"; transcript_id "ENST00000528477.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "SLC19A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "SLC19A1-012"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; tag "alternative_5_UTR"; havana_gene "OTTHUMG00000090397.4"; havana_transcript "OTTHUMT00000383494.1";
chr21	HAVANA	transcript	47013568	47016923	.	+	.	gene_id "ENSG00000233922.1"; transcript_id "ENST00000441095.1"; gene_type "lincRNA"; gene_status "PUTATIVE"; gene_name "AL133493.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AL133493.2-002"; level 2; havana_gene "OTTHUMG00000090408.1"; havana_transcript "OTTHUMT00000206834.1";
chr21	HAVANA	transcript	47013592	47017005	.	+	.	gene_id "ENSG00000233922.1"; transcript_id "ENST00000424569.1"; gene_type "lincRNA"; gene_status "PUTATIVE"; gene_name "AL133493.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AL133493.2-001"; level 2; havana_gene "OTTHUMG00000090408.1"; havana_transcript "OTTHUMT00000206833.1";
chr21	HAVANA	transcript	47063608	47362368	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000400314.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PCBP3-001"; level 2; tag "CCDS"; ccdsid "CCDS42974.2"; havana_gene "OTTHUMG00000090399.5"; havana_transcript "OTTHUMT00000206808.2";
chr21	HAVANA	transcript	47063608	47208653	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000465077.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PCBP3-006"; level 2; havana_gene "OTTHUMG00000090399.5"; havana_transcript "OTTHUMT00000206813.1";
chr21	HAVANA	transcript	47063624	47088946	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000472191.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PCBP3-007"; level 2; havana_gene "OTTHUMG00000090399.5"; havana_transcript "OTTHUMT00000206814.1";
chr21	HAVANA	transcript	47268077	47362368	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000400310.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PCBP3-002"; level 2; havana_gene "OTTHUMG00000090399.5"; havana_transcript "OTTHUMT00000206809.2";
chr21	HAVANA	transcript	47269875	47362368	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000400309.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PCBP3-004"; level 2; havana_gene "OTTHUMG00000090399.5"; havana_transcript "OTTHUMT00000206811.2";
chr21	ENSEMBL	transcript	47269875	47362367	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000449640.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PCBP3-202"; level 3; tag "CCDS"; ccdsid "CCDS42974.2"; havana_gene "OTTHUMG00000090399.5";
chr21	HAVANA	transcript	47269875	47362368	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000400308.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PCBP3-005"; level 2; tag "CCDS"; ccdsid "CCDS46652.1"; havana_gene "OTTHUMG00000090399.5"; havana_transcript "OTTHUMT00000206812.2";
chr21	HAVANA	transcript	47273885	47279691	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000481302.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PCBP3-012"; level 2; havana_gene "OTTHUMG00000090399.5"; havana_transcript "OTTHUMT00000206846.1";
chr21	HAVANA	transcript	47278851	47321504	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000498121.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PCBP3-008"; level 2; havana_gene "OTTHUMG00000090399.5"; havana_transcript "OTTHUMT00000206815.2";
chr21	ENSEMBL	transcript	47316112	47362336	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000346743.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PCBP3-201"; level 3; havana_gene "OTTHUMG00000090399.5";
chr21	HAVANA	transcript	47316184	47362368	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000400305.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PCBP3-009"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000090399.5"; havana_transcript "OTTHUMT00000206816.2";
chr21	HAVANA	transcript	47316208	47361620	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000400304.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PCBP3-003"; level 2; havana_gene "OTTHUMG00000090399.5"; havana_transcript "OTTHUMT00000206810.1";
chr21	HAVANA	transcript	47320929	47360113	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000468429.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PCBP3-010"; level 2; havana_gene "OTTHUMG00000090399.5"; havana_transcript "OTTHUMT00000206817.2";
chr21	HAVANA	transcript	47333952	47361797	.	+	.	gene_id "ENSG00000183570.8"; transcript_id "ENST00000475402.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCBP3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PCBP3-011"; level 2; havana_gene "OTTHUMG00000090399.5"; havana_transcript "OTTHUMT00000206818.2";
chr21	HAVANA	transcript	47170542	47172900	.	+	.	gene_id "ENSG00000231820.1"; transcript_id "ENST00000423045.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AL133492.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AL133492.3-001"; level 2; havana_gene "OTTHUMG00000090405.1"; havana_transcript "OTTHUMT00000206825.1";
chr21	HAVANA	transcript	47247875	47256333	.	-	.	gene_id "ENSG00000205424.1"; transcript_id "ENST00000380008.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AL592528.1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AL592528.1-001"; level 2; havana_gene "OTTHUMG00000090417.1"; havana_transcript "OTTHUMT00000206848.1";
chr21	HAVANA	transcript	47401651	47424964	.	+	.	gene_id "ENSG00000142156.8"; transcript_id "ENST00000361866.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL6A1-001"; level 2; tag "CCDS"; ccdsid "CCDS13727.1"; havana_gene "OTTHUMG00000090440.1"; havana_transcript "OTTHUMT00000206877.1";
chr21	ENSEMBL	transcript	47401682	47424962	.	+	.	gene_id "ENSG00000142156.8"; transcript_id "ENST00000538397.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL6A1-202"; level 3; havana_gene "OTTHUMG00000090440.1";
chr21	ENSEMBL	transcript	47401684	47423869	.	+	.	gene_id "ENSG00000142156.8"; transcript_id "ENST00000546256.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL6A1-203"; level 3; havana_gene "OTTHUMG00000090440.1";
chr21	ENSEMBL	transcript	47401684	47423914	.	+	.	gene_id "ENSG00000142156.8"; transcript_id "ENST00000537160.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL6A1-201"; level 3; havana_gene "OTTHUMG00000090440.1";
chr21	HAVANA	transcript	47407023	47407547	.	+	.	gene_id "ENSG00000142156.8"; transcript_id "ENST00000492851.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "COL6A1-004"; level 2; havana_gene "OTTHUMG00000090440.1"; havana_transcript "OTTHUMT00000206880.1";
chr21	HAVANA	transcript	47419314	47420842	.	+	.	gene_id "ENSG00000142156.8"; transcript_id "ENST00000466285.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A1"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "COL6A1-005"; level 2; havana_gene "OTTHUMG00000090440.1"; havana_transcript "OTTHUMT00000206881.1";
chr21	HAVANA	transcript	47420845	47423063	.	+	.	gene_id "ENSG00000142156.8"; transcript_id "ENST00000463060.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "COL6A1-006"; level 2; havana_gene "OTTHUMG00000090440.1"; havana_transcript "OTTHUMT00000206882.1";
chr21	HAVANA	transcript	47421111	47424964	.	+	.	gene_id "ENSG00000142156.8"; transcript_id "ENST00000498614.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "COL6A1-002"; level 2; havana_gene "OTTHUMG00000090440.1"; havana_transcript "OTTHUMT00000206878.1";
chr21	HAVANA	transcript	47422403	47424020	.	+	.	gene_id "ENSG00000142156.8"; transcript_id "ENST00000486023.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "COL6A1-003"; level 2; havana_gene "OTTHUMG00000090440.1"; havana_transcript "OTTHUMT00000206879.1";
chr21	HAVANA	transcript	47456966	47459721	.	+	.	gene_id "ENSG00000224413.1"; transcript_id "ENST00000451618.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001476.2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001476.2-001"; level 2; havana_gene "OTTHUMG00000090443.1"; havana_transcript "OTTHUMT00000206885.1";
chr21	HAVANA	transcript	47472510	47473019	.	+	.	gene_id "ENSG00000228235.1"; transcript_id "ENST00000429512.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001476.4"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001476.4-001"; level 2; havana_gene "OTTHUMG00000090442.1"; havana_transcript "OTTHUMT00000206884.1";
chr21	HAVANA	transcript	47476430	47477481	.	+	.	gene_id "ENSG00000226115.1"; transcript_id "ENST00000435738.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001476.3"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001476.3-001"; level 2; havana_gene "OTTHUMG00000090439.1"; havana_transcript "OTTHUMT00000206876.1";
chr21	HAVANA	transcript	47491999	47492162	.	-	.	gene_id "ENSG00000233767.1"; transcript_id "ENST00000428242.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP001472.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP001472.1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000090441.1"; havana_transcript "OTTHUMT00000206883.1";
chr21	HAVANA	transcript	47513178	47517444	.	-	.	gene_id "ENSG00000227438.1"; transcript_id "ENST00000454245.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001471.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001471.1-001"; level 2; havana_gene "OTTHUMG00000090438.1"; havana_transcript "OTTHUMT00000206875.1";
chr21	HAVANA	transcript	47518011	47552763	.	+	.	gene_id "ENSG00000142173.10"; transcript_id "ENST00000300527.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL6A2-001"; level 2; tag "CCDS"; ccdsid "CCDS13728.1"; havana_gene "OTTHUMG00000090489.5"; havana_transcript "OTTHUMT00000206971.1";
chr21	ENSEMBL	transcript	47518033	47549719	.	+	.	gene_id "ENSG00000142173.10"; transcript_id "ENST00000357838.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL6A2-202"; level 3; tag "CCDS"; ccdsid "CCDS13729.1"; havana_gene "OTTHUMG00000090489.5";
chr21	ENSEMBL	transcript	47518033	47549719	.	+	.	gene_id "ENSG00000142173.10"; transcript_id "ENST00000310645.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL6A2-201"; level 3; tag "CCDS"; ccdsid "CCDS13730.1"; havana_gene "OTTHUMG00000090489.5";
chr21	HAVANA	transcript	47518711	47532318	.	+	.	gene_id "ENSG00000142173.10"; transcript_id "ENST00000436769.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL6A2-004"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090489.5"; havana_transcript "OTTHUMT00000206974.1";
chr21	HAVANA	transcript	47531328	47549722	.	+	.	gene_id "ENSG00000142173.10"; transcript_id "ENST00000409416.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL6A2-003"; level 2; tag "CCDS"; ccdsid "CCDS13730.1"; havana_gene "OTTHUMG00000090489.5"; havana_transcript "OTTHUMT00000206973.3";
chr21	HAVANA	transcript	47531364	47549722	.	+	.	gene_id "ENSG00000142173.10"; transcript_id "ENST00000397763.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "COL6A2-002"; level 2; tag "CCDS"; ccdsid "CCDS13729.1"; havana_gene "OTTHUMG00000090489.5"; havana_transcript "OTTHUMT00000206972.2";
chr21	HAVANA	transcript	47532332	47532863	.	+	.	gene_id "ENSG00000142173.10"; transcript_id "ENST00000460886.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "COL6A2-006"; level 2; havana_gene "OTTHUMG00000090489.5"; havana_transcript "OTTHUMT00000206976.1";
chr21	HAVANA	transcript	47533531	47537435	.	+	.	gene_id "ENSG00000142173.10"; transcript_id "ENST00000485591.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "COL6A2-007"; level 2; havana_gene "OTTHUMG00000090489.5"; havana_transcript "OTTHUMT00000206977.1";
chr21	HAVANA	transcript	47540474	47545808	.	+	.	gene_id "ENSG00000142173.10"; transcript_id "ENST00000413758.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "COL6A2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "COL6A2-005"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090489.5"; havana_transcript "OTTHUMT00000206975.1";
chr21	HAVANA	transcript	47556176	47557248	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000483568.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FTCD-010"; level 2; havana_gene "OTTHUMG00000090488.2"; havana_transcript "OTTHUMT00000206968.1";
chr21	HAVANA	transcript	47556176	47575481	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000397748.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FTCD-005"; level 2; havana_gene "OTTHUMG00000090488.2"; havana_transcript "OTTHUMT00000206963.1";
chr21	HAVANA	transcript	47556176	47575481	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000291670.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FTCD-004"; level 2; tag "CCDS"; ccdsid "CCDS13731.1"; havana_gene "OTTHUMG00000090488.2"; havana_transcript "OTTHUMT00000206962.1";
chr21	HAVANA	transcript	47556176	47562655	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000460011.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FTCD-006"; level 2; havana_gene "OTTHUMG00000090488.2"; havana_transcript "OTTHUMT00000206964.1";
chr21	HAVANA	transcript	47556176	47575481	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000498355.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FTCD-003"; level 2; tag "non_canonical_TEC"; havana_gene "OTTHUMG00000090488.2"; havana_transcript "OTTHUMT00000206961.2";
chr21	ENSEMBL	transcript	47556177	47575481	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000355384.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FTCD-201"; level 3; havana_gene "OTTHUMG00000090488.2";
chr21	ENSEMBL	transcript	47556177	47575481	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000359679.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FTCD-202"; level 3; havana_gene "OTTHUMG00000090488.2";
chr21	HAVANA	transcript	47556693	47558486	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000446405.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "FTCD-011"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000090488.2"; havana_transcript "OTTHUMT00000206969.1";
chr21	HAVANA	transcript	47556693	47575481	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000397743.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FTCD-002"; level 2; havana_gene "OTTHUMG00000090488.2"; havana_transcript "OTTHUMT00000206960.1";
chr21	HAVANA	transcript	47556693	47575481	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000397746.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "FTCD-001"; level 2; tag "CCDS"; ccdsid "CCDS13731.1"; havana_gene "OTTHUMG00000090488.2"; havana_transcript "OTTHUMT00000206959.1";
chr21	HAVANA	transcript	47557153	47562583	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000494498.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FTCD-009"; level 2; havana_gene "OTTHUMG00000090488.2"; havana_transcript "OTTHUMT00000206967.1";
chr21	HAVANA	transcript	47558444	47565487	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000488577.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FTCD-008"; level 2; havana_gene "OTTHUMG00000090488.2"; havana_transcript "OTTHUMT00000206966.1";
chr21	HAVANA	transcript	47565742	47566840	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000480950.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "FTCD-007"; level 2; havana_gene "OTTHUMG00000090488.2"; havana_transcript "OTTHUMT00000206965.1";
chr21	HAVANA	transcript	47565743	47566518	.	-	.	gene_id "ENSG00000160282.9"; transcript_id "ENST00000469240.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FTCD"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "FTCD-012"; level 2; havana_gene "OTTHUMG00000090488.2"; havana_transcript "OTTHUMT00000206970.1";
chr21	HAVANA	transcript	47571528	47572561	.	+	.	gene_id "ENSG00000237338.1"; transcript_id "ENST00000446649.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001475.1"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001475.1-001"; level 2; havana_gene "OTTHUMG00000090486.1"; havana_transcript "OTTHUMT00000206957.1";
chr21	HAVANA	transcript	47581062	47604390	.	-	.	gene_id "ENSG00000160284.10"; transcript_id "ENST00000330205.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf56"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf56-001"; level 2; tag "CCDS"; ccdsid "CCDS13732.1"; havana_gene "OTTHUMG00000090487.3"; havana_transcript "OTTHUMT00000206958.2";
chr21	HAVANA	transcript	47581075	47604373	.	-	.	gene_id "ENSG00000160284.10"; transcript_id "ENST00000291672.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf56"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf56-002"; level 2; tag "CCDS"; ccdsid "CCDS46653.1"; havana_gene "OTTHUMG00000090487.3"; havana_transcript "OTTHUMT00000376654.1";
chr21	HAVANA	transcript	47604993	47608855	.	+	.	gene_id "ENSG00000228404.1"; transcript_id "ENST00000415026.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001468.58"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001468.58-001"; level 2; havana_gene "OTTHUMG00000156278.1"; havana_transcript "OTTHUMT00000343698.1";
chr21	HAVANA	transcript	47608360	47648736	.	-	.	gene_id "ENSG00000160285.9"; transcript_id "ENST00000356396.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LSS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LSS-002"; level 2; tag "CCDS"; ccdsid "CCDS13733.1"; havana_gene "OTTHUMG00000090633.8"; havana_transcript "OTTHUMT00000207273.1";
chr21	HAVANA	transcript	47608360	47613401	.	-	.	gene_id "ENSG00000160285.9"; transcript_id "ENST00000491729.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LSS"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LSS-004"; level 2; havana_gene "OTTHUMG00000090633.8"; havana_transcript "OTTHUMT00000207276.1";
chr21	HAVANA	transcript	47608388	47614494	.	-	.	gene_id "ENSG00000160285.9"; transcript_id "ENST00000419093.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LSS"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LSS-008"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000090633.8"; havana_transcript "OTTHUMT00000207280.1";
chr21	ENSEMBL	transcript	47609038	47648738	.	-	.	gene_id "ENSG00000160285.9"; transcript_id "ENST00000457828.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LSS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LSS-201"; level 3; havana_gene "OTTHUMG00000090633.8";
chr21	HAVANA	transcript	47609039	47613284	.	-	.	gene_id "ENSG00000160285.9"; transcript_id "ENST00000474319.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LSS"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LSS-003"; level 2; havana_gene "OTTHUMG00000090633.8"; havana_transcript "OTTHUMT00000207275.1";
chr21	HAVANA	transcript	47609039	47648736	.	-	.	gene_id "ENSG00000160285.9"; transcript_id "ENST00000397728.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LSS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LSS-001"; level 2; tag "CCDS"; ccdsid "CCDS13733.1"; havana_gene "OTTHUMG00000090633.8"; havana_transcript "OTTHUMT00000207274.1";
chr21	HAVANA	transcript	47610697	47648695	.	-	.	gene_id "ENSG00000160285.9"; transcript_id "ENST00000522411.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LSS"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "LSS-010"; level 2; tag "CCDS"; ccdsid "CCDS46654.1"; havana_gene "OTTHUMG00000090633.8"; havana_transcript "OTTHUMT00000376748.1";
chr21	HAVANA	transcript	47615590	47616285	.	-	.	gene_id "ENSG00000160285.9"; transcript_id "ENST00000484808.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LSS"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LSS-009"; level 2; havana_gene "OTTHUMG00000090633.8"; havana_transcript "OTTHUMT00000207281.1";
chr21	HAVANA	transcript	47635599	47648676	.	-	.	gene_id "ENSG00000160285.9"; transcript_id "ENST00000464357.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LSS"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LSS-006"; level 2; havana_gene "OTTHUMG00000090633.8"; havana_transcript "OTTHUMT00000207278.1";
chr21	HAVANA	transcript	47636303	47648682	.	-	.	gene_id "ENSG00000160285.9"; transcript_id "ENST00000450351.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LSS"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "LSS-005"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090633.8"; havana_transcript "OTTHUMT00000207277.7";
chr21	HAVANA	transcript	47647233	47648688	.	-	.	gene_id "ENSG00000160285.9"; transcript_id "ENST00000472272.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "LSS"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "LSS-007"; level 2; havana_gene "OTTHUMG00000090633.8"; havana_transcript "OTTHUMT00000207279.1";
chr21	ENSEMBL	transcript	47609043	47648619	.	-	.	gene_id "ENSG00000256842.1"; transcript_id "ENST00000540403.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP001468.2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP001468.2-201"; level 3;
chr21	ENSEMBL	transcript	47609638	47613673	.	-	.	gene_id "ENSG00000235878.2"; transcript_id "ENST00000424538.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AP001468.1"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "AP001468.1-201"; level 3;
chr21	HAVANA	transcript	47640183	47641992	.	+	.	gene_id "ENSG00000223901.1"; transcript_id "ENST00000418029.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001469.5"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001469.5-001"; level 2; havana_gene "OTTHUMG00000090629.1"; havana_transcript "OTTHUMT00000207253.1";
chr21	HAVANA	transcript	47649145	47671615	.	+	.	gene_id "ENSG00000215424.4"; transcript_id "ENST00000414659.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "MCM3AP-AS1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MCM3AP-AS1-001"; level 2; havana_gene "OTTHUMG00000090639.1"; havana_transcript "OTTHUMT00000207294.1";
chr21	HAVANA	transcript	47649148	47662913	.	+	.	gene_id "ENSG00000215424.4"; transcript_id "ENST00000432735.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "MCM3AP-AS1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MCM3AP-AS1-005"; level 2; havana_gene "OTTHUMG00000090639.1"; havana_transcript "OTTHUMT00000207298.1";
chr21	HAVANA	transcript	47649154	47662913	.	+	.	gene_id "ENSG00000215424.4"; transcript_id "ENST00000444998.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "MCM3AP-AS1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MCM3AP-AS1-004"; level 2; havana_gene "OTTHUMG00000090639.1"; havana_transcript "OTTHUMT00000207297.1";
chr21	HAVANA	transcript	47649158	47671615	.	+	.	gene_id "ENSG00000215424.4"; transcript_id "ENST00000455567.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "MCM3AP-AS1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MCM3AP-AS1-002"; level 2; havana_gene "OTTHUMG00000090639.1"; havana_transcript "OTTHUMT00000207295.1";
chr21	HAVANA	transcript	47649161	47662913	.	+	.	gene_id "ENSG00000215424.4"; transcript_id "ENST00000421927.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "MCM3AP-AS1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MCM3AP-AS1-003"; level 2; havana_gene "OTTHUMG00000090639.1"; havana_transcript "OTTHUMT00000207296.1";
chr21	HAVANA	transcript	47649438	47655367	.	+	.	gene_id "ENSG00000215424.4"; transcript_id "ENST00000420074.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "MCM3AP-AS1"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MCM3AP-AS1-006"; level 2; havana_gene "OTTHUMG00000090639.1"; havana_transcript "OTTHUMT00000207299.1";
chr21	HAVANA	transcript	47655047	47686866	.	-	.	gene_id "ENSG00000160294.5"; transcript_id "ENST00000496607.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MCM3AP"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MCM3AP-003"; level 2; havana_gene "OTTHUMG00000090630.1"; havana_transcript "OTTHUMT00000207256.1";
chr21	HAVANA	transcript	47655047	47706211	.	-	.	gene_id "ENSG00000160294.5"; transcript_id "ENST00000397708.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MCM3AP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MCM3AP-001"; level 2; tag "CCDS"; ccdsid "CCDS13734.1"; havana_gene "OTTHUMG00000090630.1"; havana_transcript "OTTHUMT00000207254.1";
chr21	HAVANA	transcript	47655047	47679179	.	-	.	gene_id "ENSG00000160294.5"; transcript_id "ENST00000467026.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MCM3AP"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MCM3AP-004"; level 2; havana_gene "OTTHUMG00000090630.1"; havana_transcript "OTTHUMT00000207257.1";
chr21	HAVANA	transcript	47655047	47687976	.	-	.	gene_id "ENSG00000160294.5"; transcript_id "ENST00000486937.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MCM3AP"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MCM3AP-002"; level 2; havana_gene "OTTHUMG00000090630.1"; havana_transcript "OTTHUMT00000207255.1";
chr21	ENSEMBL	transcript	47655048	47668689	.	-	.	gene_id "ENSG00000160294.5"; transcript_id "ENST00000539647.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MCM3AP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MCM3AP-202"; level 3; havana_gene "OTTHUMG00000090630.1";
chr21	ENSEMBL	transcript	47655048	47705236	.	-	.	gene_id "ENSG00000160294.5"; transcript_id "ENST00000291688.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MCM3AP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MCM3AP-201"; level 3; tag "CCDS"; ccdsid "CCDS13734.1"; havana_gene "OTTHUMG00000090630.1";
chr21	HAVANA	transcript	47671429	47676900	.	-	.	gene_id "ENSG00000160294.5"; transcript_id "ENST00000481113.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MCM3AP"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "MCM3AP-009"; level 2; havana_gene "OTTHUMG00000090630.1"; havana_transcript "OTTHUMT00000207262.1";
chr21	HAVANA	transcript	47676390	47679010	.	-	.	gene_id "ENSG00000160294.5"; transcript_id "ENST00000494755.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MCM3AP"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "MCM3AP-005"; level 2; havana_gene "OTTHUMG00000090630.1"; havana_transcript "OTTHUMT00000207258.1";
chr21	HAVANA	transcript	47690177	47692537	.	-	.	gene_id "ENSG00000160294.5"; transcript_id "ENST00000479557.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MCM3AP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MCM3AP-006"; level 2; havana_gene "OTTHUMG00000090630.1"; havana_transcript "OTTHUMT00000207259.1";
chr21	HAVANA	transcript	47704919	47706098	.	-	.	gene_id "ENSG00000160294.5"; transcript_id "ENST00000426537.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MCM3AP"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "MCM3AP-007"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090630.1"; havana_transcript "OTTHUMT00000207260.1";
chr21	HAVANA	transcript	47705205	47705811	.	-	.	gene_id "ENSG00000160294.5"; transcript_id "ENST00000495475.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "MCM3AP"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "MCM3AP-008"; level 2; havana_gene "OTTHUMG00000090630.1"; havana_transcript "OTTHUMT00000207261.1";
chr21	HAVANA	transcript	47666804	47667596	.	+	.	gene_id "ENSG00000228137.1"; transcript_id "ENST00000444966.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "AP001469.7"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "AP001469.7-001"; level 1; tag "exp_conf"; havana_gene "OTTHUMG00000090628.1"; havana_transcript "OTTHUMT00000207252.1";
chr21	HAVANA	transcript	47671463	47672748	.	-	.	gene_id "ENSG00000239415.1"; transcript_id "ENST00000447037.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001469.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001469.9-001"; level 2; havana_gene "OTTHUMG00000090631.1"; havana_transcript "OTTHUMT00000207263.1";
chr21	HAVANA	transcript	47671726	47674047	.	-	.	gene_id "ENSG00000239415.1"; transcript_id "ENST00000430259.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP001469.9"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP001469.9-002"; level 2; havana_gene "OTTHUMG00000090631.1"; havana_transcript "OTTHUMT00000207264.1";
chr21	HAVANA	transcript	47706251	47717665	.	+	.	gene_id "ENSG00000182362.9"; transcript_id "ENST00000397701.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YBEY"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YBEY-007"; level 2; tag "CCDS"; ccdsid "CCDS33591.1"; havana_gene "OTTHUMG00000090632.1"; havana_transcript "OTTHUMT00000207271.1";
chr21	HAVANA	transcript	47706269	47711844	.	+	.	gene_id "ENSG00000182362.9"; transcript_id "ENST00000468924.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YBEY"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YBEY-005"; level 2; havana_gene "OTTHUMG00000090632.1"; havana_transcript "OTTHUMT00000207269.1";
chr21	HAVANA	transcript	47706298	47717665	.	+	.	gene_id "ENSG00000182362.9"; transcript_id "ENST00000397692.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YBEY"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YBEY-004"; level 2; havana_gene "OTTHUMG00000090632.1"; havana_transcript "OTTHUMT00000207268.1";
chr21	HAVANA	transcript	47706298	47717665	.	+	.	gene_id "ENSG00000182362.9"; transcript_id "ENST00000339195.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YBEY"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YBEY-002"; level 2; havana_gene "OTTHUMG00000090632.1"; havana_transcript "OTTHUMT00000207266.1";
chr21	HAVANA	transcript	47706298	47717665	.	+	.	gene_id "ENSG00000182362.9"; transcript_id "ENST00000329319.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YBEY"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YBEY-001"; level 2; tag "CCDS"; ccdsid "CCDS33591.1"; havana_gene "OTTHUMG00000090632.1"; havana_transcript "OTTHUMT00000207265.1";
chr21	HAVANA	transcript	47706298	47717637	.	+	.	gene_id "ENSG00000182362.9"; transcript_id "ENST00000397694.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YBEY"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YBEY-003"; level 2; havana_gene "OTTHUMG00000090632.1"; havana_transcript "OTTHUMT00000207267.1";
chr21	HAVANA	transcript	47706368	47712111	.	+	.	gene_id "ENSG00000182362.9"; transcript_id "ENST00000492864.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YBEY"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "YBEY-006"; level 2; havana_gene "OTTHUMG00000090632.1"; havana_transcript "OTTHUMT00000207270.1";
chr21	HAVANA	transcript	47706559	47717665	.	+	.	gene_id "ENSG00000182362.9"; transcript_id "ENST00000397691.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "YBEY"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "YBEY-008"; level 2; tag "CCDS"; ccdsid "CCDS33591.1"; havana_gene "OTTHUMG00000090632.1"; havana_transcript "OTTHUMT00000207272.1";
chr21	HAVANA	transcript	47720095	47738120	.	-	.	gene_id "ENSG00000160298.13"; transcript_id "ENST00000491666.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf58"; transcript_type "nonsense_mediated_decay"; transcript_status "KNOWN"; transcript_name "C21orf58-006"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000090634.4"; havana_transcript "OTTHUMT00000207287.3";
chr21	HAVANA	transcript	47720344	47740739	.	-	.	gene_id "ENSG00000160298.13"; transcript_id "ENST00000397683.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf58"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf58-005"; level 2; havana_gene "OTTHUMG00000090634.4"; havana_transcript "OTTHUMT00000207286.1";
chr21	HAVANA	transcript	47720425	47738120	.	-	.	gene_id "ENSG00000160298.13"; transcript_id "ENST00000417060.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf58"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf58-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000090634.4"; havana_transcript "OTTHUMT00000207289.2";
chr21	HAVANA	transcript	47721044	47743789	.	-	.	gene_id "ENSG00000160298.13"; transcript_id "ENST00000397682.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf58"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf58-001"; level 2; havana_gene "OTTHUMG00000090634.4"; havana_transcript "OTTHUMT00000207282.1";
chr21	HAVANA	transcript	47721044	47743789	.	-	.	gene_id "ENSG00000160298.13"; transcript_id "ENST00000291691.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf58"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf58-002"; level 2; havana_gene "OTTHUMG00000090634.4"; havana_transcript "OTTHUMT00000207283.1";
chr21	HAVANA	transcript	47721048	47739051	.	-	.	gene_id "ENSG00000160298.13"; transcript_id "ENST00000397679.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf58"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf58-004"; level 2; havana_gene "OTTHUMG00000090634.4"; havana_transcript "OTTHUMT00000207285.1";
chr21	HAVANA	transcript	47721048	47743771	.	-	.	gene_id "ENSG00000160298.13"; transcript_id "ENST00000397680.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf58"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf58-003"; level 2; havana_gene "OTTHUMG00000090634.4"; havana_transcript "OTTHUMT00000207284.1";
chr21	HAVANA	transcript	47721624	47731545	.	-	.	gene_id "ENSG00000160298.13"; transcript_id "ENST00000472607.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf58"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "C21orf58-008"; level 2; havana_gene "OTTHUMG00000090634.4"; havana_transcript "OTTHUMT00000207290.1";
chr21	HAVANA	transcript	47734785	47743783	.	-	.	gene_id "ENSG00000160298.13"; transcript_id "ENST00000445935.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf58"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "C21orf58-009"; level 2; tag "mRNA_end_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000090634.4"; havana_transcript "OTTHUMT00000339712.1";
chr21	HAVANA	transcript	47734785	47743783	.	-	.	gene_id "ENSG00000160298.13"; transcript_id "ENST00000475776.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf58"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "C21orf58-010"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000090634.4"; havana_transcript "OTTHUMT00000339713.1";
chr21	ENSEMBL	transcript	47734785	47743783	.	-	.	gene_id "ENSG00000160298.13"; transcript_id "ENST00000397685.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "C21orf58"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "C21orf58-201"; level 3; havana_gene "OTTHUMG00000090634.4";
chr21	HAVANA	transcript	47744036	47865682	.	+	.	gene_id "ENSG00000160299.11"; transcript_id "ENST00000359568.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCNT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PCNT-001"; level 2; tag "CCDS"; ccdsid "CCDS33592.1"; havana_gene "OTTHUMG00000090665.1"; havana_transcript "OTTHUMT00000207336.1";
chr21	HAVANA	transcript	47744055	47769714	.	+	.	gene_id "ENSG00000160299.11"; transcript_id "ENST00000490468.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCNT"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PCNT-003"; level 2; havana_gene "OTTHUMG00000090665.1"; havana_transcript "OTTHUMT00000207338.1";
chr21	ENSEMBL	transcript	47744058	47783490	.	+	.	gene_id "ENSG00000160299.11"; transcript_id "ENST00000337772.5"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCNT"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PCNT-201"; level 3; havana_gene "OTTHUMG00000090665.1";
chr21	HAVANA	transcript	47744802	47865682	.	+	.	gene_id "ENSG00000160299.11"; transcript_id "ENST00000480896.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCNT"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PCNT-002"; level 2; havana_gene "OTTHUMG00000090665.1"; havana_transcript "OTTHUMT00000207337.1";
chr21	HAVANA	transcript	47766052	47773217	.	+	.	gene_id "ENSG00000160299.11"; transcript_id "ENST00000466474.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCNT"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PCNT-004"; level 2; havana_gene "OTTHUMG00000090665.1"; havana_transcript "OTTHUMT00000207339.1";
chr21	HAVANA	transcript	47768153	47773240	.	+	.	gene_id "ENSG00000160299.11"; transcript_id "ENST00000483844.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCNT"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PCNT-005"; level 2; havana_gene "OTTHUMG00000090665.1"; havana_transcript "OTTHUMT00000207340.1";
chr21	HAVANA	transcript	47851173	47851949	.	+	.	gene_id "ENSG00000160299.11"; transcript_id "ENST00000482575.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCNT"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PCNT-006"; level 2; havana_gene "OTTHUMG00000090665.1"; havana_transcript "OTTHUMT00000207341.1";
chr21	HAVANA	transcript	47856954	47865350	.	+	.	gene_id "ENSG00000160299.11"; transcript_id "ENST00000418394.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCNT"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PCNT-007"; level 2; tag "mRNA_start_NF"; tag "cds_start_NF"; havana_gene "OTTHUMG00000090665.1"; havana_transcript "OTTHUMT00000207342.1";
chr21	HAVANA	transcript	47860907	47863085	.	+	.	gene_id "ENSG00000160299.11"; transcript_id "ENST00000465356.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PCNT"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PCNT-008"; level 2; havana_gene "OTTHUMG00000090665.1"; havana_transcript "OTTHUMT00000207343.1";
chr21	HAVANA	transcript	47840467	47840948	.	-	.	gene_id "ENSG00000225043.1"; transcript_id "ENST00000450007.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AP000336.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AP000336.1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000154992.1"; havana_transcript "OTTHUMT00000337967.1";
chr21	ENSEMBL	transcript	47874900	47878593	.	-	.	gene_id "ENSG00000245754.1"; transcript_id "ENST00000499524.1"; gene_type "lincRNA"; gene_status "NOVEL"; gene_name "AP000337.1"; transcript_type "lincRNA"; transcript_status "NOVEL"; transcript_name "AP000337.1-201"; level 3;
chr21	HAVANA	transcript	47878812	47989621	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000400274.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DIP2A-001"; level 2; havana_gene "OTTHUMG00000090717.3"; havana_transcript "OTTHUMT00000207431.1";
chr21	ENSEMBL	transcript	47878855	47976432	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000427143.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DIP2A-203"; level 3; havana_gene "OTTHUMG00000090717.3";
chr21	ENSEMBL	transcript	47878862	47989926	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000358985.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DIP2A-202"; level 3; havana_gene "OTTHUMG00000090717.3";
chr21	ENSEMBL	transcript	47878862	47989926	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000318711.7"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DIP2A-201"; level 3; havana_gene "OTTHUMG00000090717.3";
chr21	HAVANA	transcript	47878863	47970023	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000457905.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DIP2A-002"; level 2; tag "CCDS"; ccdsid "CCDS46656.1"; havana_gene "OTTHUMG00000090717.3"; havana_transcript "OTTHUMT00000207432.2";
chr21	HAVANA	transcript	47878890	47967118	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000466639.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DIP2A-004"; level 2; havana_gene "OTTHUMG00000090717.3"; havana_transcript "OTTHUMT00000207434.2";
chr21	HAVANA	transcript	47878970	47967118	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000435722.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DIP2A-003"; level 2; tag "CCDS"; ccdsid "CCDS46657.1"; havana_gene "OTTHUMG00000090717.3"; havana_transcript "OTTHUMT00000207433.2";
chr21	HAVANA	transcript	47879024	47989765	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000417564.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "DIP2A-012"; level 2; tag "CCDS"; ccdsid "CCDS46655.1"; havana_gene "OTTHUMG00000090717.3"; havana_transcript "OTTHUMT00000376736.1";
chr21	HAVANA	transcript	47924226	47965118	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000473752.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "DIP2A-006"; level 2; havana_gene "OTTHUMG00000090717.3"; havana_transcript "OTTHUMT00000207436.2";
chr21	HAVANA	transcript	47924293	47966217	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000494435.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DIP2A-005"; level 2; havana_gene "OTTHUMG00000090717.3"; havana_transcript "OTTHUMT00000207435.1";
chr21	HAVANA	transcript	47958648	47967118	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000480553.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DIP2A-007"; level 2; havana_gene "OTTHUMG00000090717.3"; havana_transcript "OTTHUMT00000207437.2";
chr21	HAVANA	transcript	47972824	47978651	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000472364.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DIP2A-008"; level 2; havana_gene "OTTHUMG00000090717.3"; havana_transcript "OTTHUMT00000207438.1";
chr21	HAVANA	transcript	47975432	47979019	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000481883.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DIP2A-009"; level 2; havana_gene "OTTHUMG00000090717.3"; havana_transcript "OTTHUMT00000207439.1";
chr21	HAVANA	transcript	47981198	47989621	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000478105.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "DIP2A-010"; level 2; havana_gene "OTTHUMG00000090717.3"; havana_transcript "OTTHUMT00000207440.1";
chr21	HAVANA	transcript	47983573	47989621	.	+	.	gene_id "ENSG00000160305.12"; transcript_id "ENST00000479654.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DIP2A"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "DIP2A-011"; level 2; havana_gene "OTTHUMG00000090717.3"; havana_transcript "OTTHUMT00000207441.1";
chr21	HAVANA	transcript	47882384	47889219	.	+	.	gene_id "ENSG00000223692.1"; transcript_id "ENST00000442434.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AP000337.3"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "AP000337.3-001"; level 2; havana_gene "OTTHUMG00000090716.1"; havana_transcript "OTTHUMT00000207430.1";
chr21	ENSEMBL	transcript	47945531	47945635	.	+	.	gene_id "ENSG00000202239.1"; transcript_id "ENST00000365369.1"; gene_type "snRNA"; gene_status "NOVEL"; gene_name "U6.349"; transcript_type "snRNA"; transcript_status "NOVEL"; transcript_name "U6.349-201"; level 3;
chr21	ENSEMBL	transcript	47955709	47956005	.	+	.	gene_id "ENSG00000239688.1"; transcript_id "ENST00000490405.1"; gene_type "scRNA_pseudogene"; gene_status "NOVEL"; gene_name "AP000338.1"; transcript_type "scRNA_pseudogene"; transcript_status "NOVEL"; transcript_name "AP000338.1-201"; level 3;
chr21	HAVANA	transcript	48018875	48025121	.	-	.	gene_id "ENSG00000160307.5"; transcript_id "ENST00000291700.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "S100B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "S100B-001"; level 2; tag "CCDS"; ccdsid "CCDS13736.1"; havana_gene "OTTHUMG00000090715.2"; havana_transcript "OTTHUMT00000207427.1";
chr21	HAVANA	transcript	48018875	48025121	.	-	.	gene_id "ENSG00000160307.5"; transcript_id "ENST00000367071.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "S100B"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "S100B-002"; level 2; havana_gene "OTTHUMG00000090715.2"; havana_transcript "OTTHUMT00000207428.1";
chr21	HAVANA	transcript	48019194	48022806	.	-	.	gene_id "ENSG00000160307.5"; transcript_id "ENST00000397648.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "S100B"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "S100B-003"; level 2; tag "CCDS"; ccdsid "CCDS13736.1"; havana_gene "OTTHUMG00000090715.2"; havana_transcript "OTTHUMT00000207429.2";
chr21	HAVANA	transcript	48055079	48084863	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000355680.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRMT2-001"; level 2; tag "CCDS"; ccdsid "CCDS13737.1"; havana_gene "OTTHUMG00000048806.3"; havana_transcript "OTTHUMT00000110452.2";
chr21	HAVANA	transcript	48055527	48084863	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000397638.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRMT2-004"; level 2; tag "CCDS"; ccdsid "CCDS13737.1"; havana_gene "OTTHUMG00000048806.3"; havana_transcript "OTTHUMT00000207402.1";
chr21	ENSEMBL	transcript	48055557	48084857	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000458387.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRMT2-204"; level 3; havana_gene "OTTHUMG00000048806.3";
chr21	ENSEMBL	transcript	48055557	48084857	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000451211.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRMT2-203"; level 3; havana_gene "OTTHUMG00000048806.3";
chr21	ENSEMBL	transcript	48055557	48084857	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000291705.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRMT2-201"; level 3; havana_gene "OTTHUMG00000048806.3";
chr21	HAVANA	transcript	48055562	48084863	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000397637.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRMT2-003"; level 2; tag "CCDS"; ccdsid "CCDS13737.1"; havana_gene "OTTHUMG00000048806.3"; havana_transcript "OTTHUMT00000207401.1";
chr21	HAVANA	transcript	48055565	48072230	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000334494.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PRMT2-002"; level 2; havana_gene "OTTHUMG00000048806.3"; havana_transcript "OTTHUMT00000110453.1";
chr21	HAVANA	transcript	48055586	48069805	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000397628.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRMT2-009"; level 2; havana_gene "OTTHUMG00000048806.3"; havana_transcript "OTTHUMT00000207407.1";
chr21	HAVANA	transcript	48055593	48085036	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000440086.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "protein_coding"; transcript_status "NOVEL"; transcript_name "PRMT2-012"; level 2; havana_gene "OTTHUMG00000048806.3"; havana_transcript "OTTHUMT00000339691.1";
chr21	HAVANA	transcript	48063198	48081182	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000482508.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRMT2-005"; level 2; havana_gene "OTTHUMG00000048806.3"; havana_transcript "OTTHUMT00000207403.1";
chr21	ENSEMBL	transcript	48063446	48079342	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000379844.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "protein_coding"; transcript_status "KNOWN"; transcript_name "PRMT2-202"; level 3; havana_gene "OTTHUMG00000048806.3";
chr21	HAVANA	transcript	48063447	48079342	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000481861.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRMT2-006"; level 2; havana_gene "OTTHUMG00000048806.3"; havana_transcript "OTTHUMT00000207404.1";
chr21	HAVANA	transcript	48064255	48072864	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000455177.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "protein_coding"; transcript_status "PUTATIVE"; transcript_name "PRMT2-008"; level 2; tag "mRNA_start_NF"; tag "mRNA_end_NF"; tag "cds_start_NF"; tag "cds_end_NF"; havana_gene "OTTHUMG00000048806.3"; havana_transcript "OTTHUMT00000207406.1";
chr21	HAVANA	transcript	48068230	48069800	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000491389.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "processed_transcript"; transcript_status "PUTATIVE"; transcript_name "PRMT2-011"; level 2; havana_gene "OTTHUMG00000048806.3"; havana_transcript "OTTHUMT00000207409.1";
chr21	HAVANA	transcript	48068420	48069805	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000498151.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "processed_transcript"; transcript_status "KNOWN"; transcript_name "PRMT2-010"; level 2; havana_gene "OTTHUMG00000048806.3"; havana_transcript "OTTHUMT00000207408.1";
chr21	HAVANA	transcript	48076735	48084863	.	+	.	gene_id "ENSG00000160310.11"; transcript_id "ENST00000486520.1"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "PRMT2"; transcript_type "retained_intron"; transcript_status "KNOWN"; transcript_name "PRMT2-007"; level 2; havana_gene "OTTHUMG00000048806.3"; havana_transcript "OTTHUMT00000207405.1";
chr21	HAVANA	transcript	48073470	48073934	.	-	.	gene_id "ENSG00000230982.1"; transcript_id "ENST00000419906.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "DSTNP1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "DSTNP1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000048830.1"; havana_transcript "OTTHUMT00000110477.1";
chr21	HAVANA	transcript	48110676	48111138	.	+	.	gene_id "ENSG00000212932.2"; transcript_id "ENST00000427757.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPL23AP4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RPL23AP4-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000090714.1"; havana_transcript "OTTHUMT00000207426.1";
chr21	ENSEMBL	transcript	48110795	48111157	.	+	.	gene_id "ENSG00000212932.2"; transcript_id "ENST00000434638.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RPL23AP4"; transcript_type "retrotransposed"; transcript_status "KNOWN"; transcript_name "RPL23AP4-201"; level 3; havana_gene "OTTHUMG00000090714.1";
chr1	HAVANA	transcript	11869	14409	.	+	.	gene_id "ENSG00000223972.3"; transcript_id "ENST00000456328.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "DDX11L1"; transcript_type "un-processed_transcript"; transcript_status "KNOWN"; transcript_name "DDX11L1-002"; level 2; havana_gene "OTTHUMG00000000961.2"; havana_transcript "OTTHUMT00000362751.1";
chr2	HAVANA	transcript	38814	46385	.	-	.	gene_id "ENSG00000184731.5"; transcript_id "ENST00000327669.4"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "FAM110C"; transcript_type "un-protein_coding"; transcript_status "KNOWN"; transcript_name "FAM110C-001"; level 2; tag "CCDS"; ccdsid "CCDS42645.1"; havana_gene "OTTHUMG00000151321.1"; havana_transcript "OTTHUMT00000322220.1";
chr3	HAVANA	transcript	65431	66175	.	+	.	gene_id "ENSG00000223587.1"; transcript_id "ENST00000440867.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AY269186.1"; transcript_type "un-processed_transcript"; transcript_status "KNOWN"; transcript_name "AY269186.1-001"; level 2; tag "mRNA_start_NF"; havana_gene "OTTHUMG00000154851.1"; havana_transcript "OTTHUMT00000337363.1";
chr4	HAVANA	transcript	49448	50018	.	-	.	gene_id "ENSG00000248302.1"; transcript_id "ENST00000503774.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "Z95704.4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "Z95704.4-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000159940.1"; havana_transcript "OTTHUMT00000358399.1";
chr5	HAVANA	transcript	58313	59030	.	+	.	gene_id "ENSG00000250020.1"; transcript_id "ENST00000506872.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RP11-811I15.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RP11-811I15.1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000161552.1"; havana_transcript "OTTHUMT00000365272.1";
chr6	HAVANA	transcript	105919	106856	.	-	.	gene_id "ENSG00000220212.1"; transcript_id "ENST00000405102.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RP1-24O22.1"; transcript_type "pseudogene"; transcript_status "KNOWN"; transcript_name "RP1-24O22.1-001"; level 2; havana_gene "OTTHUMG00000014107.1"; havana_transcript "OTTHUMT00000039615.1";
chr7	HAVANA	transcript	19757	35457	.	-	.	gene_id "ENSG00000244758.1"; transcript_id "ENST00000480075.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "AC093627.6"; transcript_type "un-processed_transcript"; transcript_status "KNOWN"; transcript_name "AC093627.6-002"; level 2; havana_gene "OTTHUMG00000151404.2"; havana_transcript "OTTHUMT00000322482.1";
chr8	HAVANA	transcript	14091	14320	.	-	.	gene_id "ENSG00000253620.2"; transcript_id "ENST00000520139.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "AC144568.4"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "AC144568.4-001"; level 2; ont "PGO:0000004"; havana_gene "OTTHUMG00000163938.2"; havana_transcript "OTTHUMT00000376500.2";
chr9	ENSEMBL	transcript	11987	14522	.	+	.	gene_id "ENSG00000236875.2"; transcript_id "ENST00000426146.2"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "DDX11L11"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "DDX11L11-201"; level 3; havana_gene "OTTHUMG00000019419.1";
chr10	HAVANA	transcript	60001	60544	.	-	.	gene_id "ENSG00000224285.1"; transcript_id "ENST00000449585.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "RP11-631M21.1"; transcript_type "un-processed_transcript"; transcript_status "PUTATIVE"; transcript_name "RP11-631M21.1-001"; level 2; havana_gene "OTTHUMG00000017523.1"; havana_transcript "OTTHUMT00000046373.1";
chr11	HAVANA	transcript	75780	76143	.	+	.	gene_id "ENSG00000253826.1"; transcript_id "ENST00000519787.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RP11-304M2.1"; transcript_type "processed_pseudogene"; transcript_status "KNOWN"; transcript_name "RP11-304M2.1-001"; level 1; ont "PGO:0000004"; tag "pseudo_consens"; havana_gene "OTTHUMG00000165075.1"; havana_transcript "OTTHUMT00000381706.1";
chr12	HAVANA	transcript	67607	69138	.	+	.	gene_id "ENSG00000249054.2"; transcript_id "ENST00000504074.1"; gene_type "lincRNA"; gene_status "KNOWN"; gene_name "AC215219.2"; transcript_type "lincRNA"; transcript_status "KNOWN"; transcript_name "AC215219.2-001"; level 2; havana_gene "OTTHUMG00000167962.2"; havana_transcript "OTTHUMT00000397330.1";
chr13	HAVANA	transcript	19041312	19059588	.	-	.	gene_id "ENSG00000215604.3"; transcript_id "ENST00000443465.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "ZNF962P"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "ZNF962P-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000016450.1"; havana_transcript "OTTHUMT00000043973.1";
chr14	HAVANA	transcript	19110324	19123941	.	+	.	gene_id "ENSG00000215398.5"; transcript_id "ENST00000514609.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RP11-754I20.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "RP11-754I20.1-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000163209.2"; havana_transcript "OTTHUMT00000372092.2";
chr15	ENSEMBL	transcript	20083769	20089172	.	+	.	gene_id "ENSG00000215567.4"; transcript_id "ENST00000400231.4"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "RP11-79C23.1"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "RP11-79C23.1-201"; level 3; havana_gene "OTTHUMG00000163698.1";
chr16	ENSEMBL	transcript	61553	64093	.	+	.	gene_id "ENSG00000233614.4"; transcript_id "ENST00000545636.1"; gene_type "processed_transcript"; gene_status "NOVEL"; gene_name "Z84812.1"; transcript_type "un-processed_transcript"; transcript_status "KNOWN"; transcript_name "Z84812.1-201"; level 3; havana_gene "OTTHUMG00000059913.1";
chr17	ENSEMBL	transcript	6007	31270	.	-	.	gene_id "ENSG00000187939.8"; transcript_id "ENST00000343572.6"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DOC2B"; transcript_type "un-protein_coding"; transcript_status "KNOWN"; transcript_name "DOC2B-201"; level 3; havana_gene "OTTHUMG00000154415.2";
chr18	HAVANA	transcript	47390	49557	.	-	.	gene_id "ENSG00000173213.4"; transcript_id "ENST00000308911.4"; gene_type "protein_coding"; gene_status "NOVEL"; gene_name "RP11-683L23.1"; transcript_type "un-protein_coding"; transcript_status "NOVEL"; transcript_name "RP11-683L23.1-001"; level 2; havana_gene "OTTHUMG00000163448.1"; havana_transcript "OTTHUMT00000373499.1";
chr19	ENSEMBL	transcript	65917	70966	.	-	.	gene_id "ENSG00000225373.1"; transcript_id "ENST00000391654.3"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "AC008993.1"; transcript_type "un-protein_coding"; transcript_status "KNOWN"; transcript_name "AC008993.1-201"; level 3;
chr20	HAVANA	transcript	68351	77174	.	+	.	gene_id "ENSG00000178591.5"; transcript_id "ENST00000382410.2"; gene_type "protein_coding"; gene_status "KNOWN"; gene_name "DEFB125"; transcript_type "un-protein_coding"; transcript_status "KNOWN"; transcript_name "DEFB125-001"; level 2; tag "CCDS"; ccdsid "CCDS12989.2"; havana_gene "OTTHUMG00000031614.2"; havana_transcript "OTTHUMT00000077426.2";
chr22	HAVANA	transcript	16062157	16063236	.	+	.	gene_id "ENSG00000233866.1"; transcript_id "ENST00000424770.1"; gene_type "processed_transcript"; gene_status "PUTATIVE"; gene_name "LA16c-4G1.3"; transcript_type "un-processed_transcript"; transcript_status "PUTATIVE"; transcript_name "LA16c-4G1.3-001"; level 2; havana_gene "OTTHUMG00000140195.1"; havana_transcript "OTTHUMT00000276574.1";
chrX	HAVANA	transcript	170410	172712	.	+	.	gene_id "ENSG00000228572.1"; transcript_id "ENST00000431238.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NCRNA00108"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NCRNA00108-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000046372.2"; havana_transcript "OTTHUMT00000107057.2";
chrY	HAVANA	transcript	120410	122712	.	+	.	gene_id "ENSGR0000228572.1"; transcript_id "ENSTR0000431238.1"; gene_type "pseudogene"; gene_status "KNOWN"; gene_name "NCRNA00108"; transcript_type "unprocessed_pseudogene"; transcript_status "KNOWN"; transcript_name "NCRNA00108-001"; level 2; ont "PGO:0000005"; havana_gene "OTTHUMG00000046372.2"; havana_transcript "OTTHUMT00000107057.2"; tag "PAR";
chrM	ENSEMBL	transcript	577	647	.	+	.	gene_id "ENSG00000210049.1"; transcript_id "ENST00000387314.1"; gene_type "Mt_tRNA"; gene_status "NOVEL"; gene_name "J01415.2"; transcript_type "Mt_tRNA"; transcript_status "NOVEL"; transcript_name "J01415.2-201"; level 3;
