#####################################################################
## FILE: Makefile.am
# AUTHOR: William Stafford Noble, Charles E. Grant, Timothy Bailey
# CREATE DATE: 2019
# PROJECT: MEME Suite
# COPYRIGHT: 2003, UW
#####################################################################

## Automake uses this file to generate a Makefile

# This Makefile builds the test output used to test FIMO.

# These files should be removed as part of the 'make clean' target.
CLEANFILES = 

# These files should be included with the distribution.
DATAFILES = \
	p300_links.tsv \
	P300.2x.bed \
	p300_no_panel_links.tsv \
	Rxra.bed \
	p300_no_panel_tgene.html \
	Rxra_links.tsv \
	p300_tgene.html \
	Rxra_tgene.html \
	gencode.v7.transcripts.chr21.gtf \
	Expression/Sknshra/Cage.gtf \
	Expression/Nhlf/dummy \
	Expression/Nhek/Cage.gtf \
	Expression/Mcf7/Cage.gtf \
	Expression/K562/Cage.gtf \
	Expression/Huvec/Cage.gtf \
	Expression/Hsmm/dummy \
	Expression/Hmec/dummy \
	Expression/Hepg2/Cage.gtf \
	Expression/Helas3/Cage.gtf \
	Expression/H1hesc/Cage.gtf \
	Expression/Gm12878/Cage.gtf \
	Expression/Bj/Cage.gtf \
	Expression/Ag04450/Cage.gtf \
	Expression/A549/Cage.gtf \
	Histone/Sknshra/dummy \
	Histone/Nhlf/wgEncodeBroadHistoneNhlfH3k27acStdPk.chr21.broadPeak \
	Histone/Nhlf/wgEncodeBroadHistoneNhlfH3k4me3StdPk.chr21.broadPeak \
	Histone/Nhek/wgEncodeBroadHistoneNhekH3k27acStdPk.chr21.broadPeak \
	Histone/Nhek/wgEncodeBroadHistoneNhekH3k4me3StdPk.chr21.broadPeak \
	Histone/Mcf7/dummy \
	Histone/K562/wgEncodeBroadHistoneK562H3k27acStdPk.chr21.broadPeak \
	Histone/K562/wgEncodeBroadHistoneK562H3k4me3StdPk.chr21.broadPeak \
	Histone/Huvec/wgEncodeBroadHistoneHuvecH3k27acStdPk.chr21.broadPeak \
	Histone/Huvec/wgEncodeBroadHistoneHuvecH3k4me3StdPk.chr21.broadPeak \
	Histone/Hsmm/wgEncodeBroadHistoneHsmmH3k27acStdPk.chr21.broadPeak \
	Histone/Hsmm/wgEncodeBroadHistoneHsmmH3k4me3StdPk.chr21.broadPeak \
	Histone/Hmec/wgEncodeBroadHistoneHmecH3k27acStdPk.chr21.broadPeak \
	Histone/Hmec/wgEncodeBroadHistoneHmecH3k4me3StdPk.chr21.broadPeak \
	Histone/Hepg2/wgEncodeBroadHistoneHepg2H3k27acStdPk.chr21.broadPeak \
	Histone/Hepg2/wgEncodeBroadHistoneHepg2H3k4me3StdPk.chr21.broadPeak \
	Histone/Helas3/wgEncodeBroadHistoneHelas3H3k27acStdPk.chr21.broadPeak \
	Histone/Helas3/wgEncodeBroadHistoneHelas3H3k4me3StdPk.chr21.broadPeak \
	Histone/H1hesc/wgEncodeBroadHistoneH1hescH3k27acStdPk.chr21.broadPeak \
	Histone/H1hesc/wgEncodeBroadHistoneH1hescH3k4me3StdPk.chr21.broadPeak \
	Histone/Gm12878/wgEncodeBroadHistoneGm12878H3k27acStdPk.chr21.broadPeak \
	Histone/Gm12878/wgEncodeBroadHistoneGm12878H3k4me3StdPk.chr21.broadPeak \
	Histone/Bj/dummy \
	Histone/Ag04450/dummy \
	Histone/A549/dummy
	
EXTRA_DIST = $(DATAFILES)
