<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<!-- Document definition -->
<!DOCTYPE MEME[
<!ELEMENT MEME (
  training_set,
  model, 
  motifs, 
  scanned_sites_summary?
)>
<!ATTLIST MEME 
  version CDATA #REQUIRED
  release CDATA #REQUIRED
>
<!-- Training-set elements -->
<!ELEMENT training_set (alphabet, ambigs, sequence*, letter_frequencies)>
<!ATTLIST training_set primary_sequences CDATA #REQUIRED primary_count CDATA #REQUIRED primary_positions CDATA #REQUIRED
  control_sequences CDATA "" control_count CDATA "" control_positions CDATA "">
<!ELEMENT alphabet (letter*)>
<!ATTLIST alphabet name CDATA #REQUIRED>
<!ELEMENT ambigs (letter*)>
<!ELEMENT letter EMPTY>
<!ATTLIST letter id ID #REQUIRED>
<!ATTLIST letter symbol CDATA #REQUIRED>
<!ATTLIST letter equals CDATA #IMPLIED>
<!ATTLIST letter aliases CDATA #IMPLIED>
<!ATTLIST letter complement CDATA #IMPLIED>
<!ATTLIST letter name CDATA #IMPLIED>
<!ATTLIST letter colour CDATA #IMPLIED>
<!ELEMENT sequence EMPTY>
<!ATTLIST sequence id ID #REQUIRED
                   name CDATA #REQUIRED
                   length CDATA #REQUIRED
                   weight CDATA #REQUIRED
>
<!ELEMENT letter_frequencies (alphabet_array)>

<!-- Model elements -->
<!ELEMENT model (
  command_line,
  host,
  type,
  nmotifs,
  evalue_threshold,
  object_function,
  spfun,
  min_width,
  max_width,
  wg,
  ws,
  endgaps,
  minsites,
  maxsites,
  wnsites,
  spmap,
  spfuzz,
  prior,
  beta,
  maxiter,
  distance,
  num_positions,
  seed,
  hsfrac,
  searchsize,
  maxsize,
  norand,
  csites,
  strands,
  brief,
  psp_file,
  priors_file,
  reason_for_stopping,
  background_frequencies
)>
<!ELEMENT command_line (#PCDATA)*>
<!ELEMENT host (#PCDATA)*>
<!ELEMENT type (#PCDATA)*>
<!ELEMENT nmotifs (#PCDATA)*>
<!ELEMENT evalue_threshold (#PCDATA)*>
<!ELEMENT object_function (#PCDATA)*>
<!ELEMENT spfun (#PCDATA)*>
<!ELEMENT min_width (#PCDATA)*>
<!ELEMENT max_width (#PCDATA)*>
<!ELEMENT wg (#PCDATA)*>
<!ELEMENT ws (#PCDATA)*>
<!ELEMENT endgaps (#PCDATA)*>
<!ELEMENT minsites (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT wnsites (#PCDATA)*>
<!ELEMENT spmap (#PCDATA)*>
<!ELEMENT spfuzz (#PCDATA)*>
<!ELEMENT prior (#PCDATA)*>
<!ELEMENT beta (#PCDATA)*>
<!ELEMENT maxiter (#PCDATA)*>
<!ELEMENT distance (#PCDATA)*>
<!ELEMENT num_positions (#PCDATA)*>
<!ELEMENT seed (#PCDATA)*>
<!ELEMENT hsfrac (#PCDATA)*>
<!ELEMENT searchsize (#PCDATA)*>
<!ELEMENT maxsize (#PCDATA)*>
<!ELEMENT norand (#PCDATA)*>
<!ELEMENT csites (#PCDATA)*>
<!ELEMENT strands (#PCDATA)*>
<!ELEMENT brief (#PCDATA)*>
<!ELEMENT psp_file (#PCDATA)*>
<!ELEMENT priors_file (#PCDATA)*>
<!ELEMENT reason_for_stopping (#PCDATA)*>
<!ELEMENT background_frequencies (alphabet_array)>
<!ATTLIST background_frequencies source CDATA #REQUIRED
		   order CDATA #REQUIRED>

<!-- Motif elements -->
<!ELEMENT motifs (motif*)>
<!ELEMENT motif (scores, probabilities, regular_expression?, contributing_sites)>
<!ATTLIST motif id ID #REQUIRED
                name CDATA #REQUIRED
                alt CDATA ""
                width CDATA #REQUIRED
                sites CDATA #REQUIRED
                ic CDATA #REQUIRED
                re CDATA #REQUIRED
                llr CDATA #REQUIRED
                p_value CDATA #REQUIRED
                e_value CDATA #REQUIRED
                bayes_threshold CDATA #REQUIRED
                elapsed_time CDATA #REQUIRED
                url CDATA ""
>
<!ELEMENT scores (alphabet_matrix)>
<!ELEMENT probabilities (alphabet_matrix)>
<!ELEMENT regular_expression (#PCDATA)*>

<!-- Contributing site elements -->
<!-- Contributing sites are motif occurences found during the motif discovery phase -->
<!ELEMENT contributing_sites (contributing_site*)>
<!ELEMENT contributing_site (left_flank, site, right_flank)>
<!ATTLIST contributing_site sequence_id IDREF #REQUIRED
                          position CDATA #REQUIRED
                          strand (plus|minus|none) 'none'
                          pvalue CDATA #REQUIRED
>
<!-- The left_flank contains the sequence for 10 bases to the left of the motif start -->
<!ELEMENT left_flank (#PCDATA)>
<!-- The site contains the sequence for the motif instance -->
<!ELEMENT site (letter_ref*)>
<!-- The right_flank contains the sequence for 10 bases to the right of the motif end -->
<!ELEMENT right_flank (#PCDATA)>

<!-- Scanned site elements -->
<!-- Scanned sites are motif occurences found during the sequence scan phase -->
<!ELEMENT scanned_sites_summary (scanned_sites*)>
<!ATTLIST scanned_sites_summary p_thresh CDATA #REQUIRED>
<!ELEMENT scanned_sites (scanned_site*)>
<!ATTLIST scanned_sites sequence_id IDREF #REQUIRED
                        pvalue CDATA #REQUIRED
                        num_sites CDATA #REQUIRED>
<!ELEMENT scanned_site EMPTY>
<!ATTLIST scanned_site  motif_id IDREF #REQUIRED
                        strand (plus|minus|none) 'none'
                        position CDATA #REQUIRED
                        pvalue CDATA #REQUIRED>

<!-- Utility elements -->
<!-- A reference to a letter in the alphabet -->
<!ELEMENT letter_ref EMPTY>
<!ATTLIST letter_ref letter_id IDREF #REQUIRED>
<!-- A alphabet-array contains one floating point value for each letter in an alphabet -->
<!ELEMENT alphabet_array (value*)>
<!ELEMENT value (#PCDATA)>
<!ATTLIST value letter_id IDREF #REQUIRED>

<!-- A alphabet_matrix contains one alphabet_array for each position in a motif -->
<!ELEMENT alphabet_matrix (alphabet_array*)>

]>
<!-- Begin document body -->
<MEME version="5.3.2" release="Fri Feb 5 17:50:07 2021 -0800">
<training_set primary_sequences="common/adh.s" primary_count="33" primary_positions="9996" control_sequences="Primary sequences shuffled preserving 2-mers" control_count="33" control_positions="9996">
<alphabet name="Protein" like="protein">
<letter id="A" symbol="A" name="Alanine" colour="0000CC"/>
<letter id="C" symbol="C" name="Cysteine" colour="0000CC"/>
<letter id="D" symbol="D" name="Aspartic acid" colour="FF00FF"/>
<letter id="E" symbol="E" name="Glutamic acid" colour="FF00FF"/>
<letter id="F" symbol="F" name="Phenylalanine" colour="0000CC"/>
<letter id="G" symbol="G" name="Glycine" colour="FFB300"/>
<letter id="H" symbol="H" name="Histidine" colour="FFCCCC"/>
<letter id="I" symbol="I" name="Isoleucine" colour="0000CC"/>
<letter id="K" symbol="K" name="Lysine" colour="CC0000"/>
<letter id="L" symbol="L" name="Leucine" colour="0000CC"/>
<letter id="M" symbol="M" name="Methionine" colour="0000CC"/>
<letter id="N" symbol="N" name="Asparagine" colour="008000"/>
<letter id="P" symbol="P" name="Proline" colour="FFFF00"/>
<letter id="Q" symbol="Q" name="Glutamine" colour="008000"/>
<letter id="R" symbol="R" name="Arginine" colour="CC0000"/>
<letter id="S" symbol="S" name="Serine" colour="008000"/>
<letter id="T" symbol="T" name="Threonine" colour="008000"/>
<letter id="V" symbol="V" name="Valine" colour="0000CC"/>
<letter id="W" symbol="W" name="Tryptophan" colour="0000CC"/>
<letter id="Y" symbol="Y" name="Tyrosine" colour="33E6CC"/>
<letter id="X" symbol="X" aliases="*." equals="ACDEFGHIKLMNPQRSTVWY" name="Any amino acid"/>
<letter id="B" symbol="B" equals="DN" name="Asparagine or Aspartic acid"/>
<letter id="Z" symbol="Z" equals="EQ" name="Glutamine or Glutamic acid"/>
<letter id="J" symbol="J" equals="IL" name="Leucine or Isoleucine"/>
</alphabet>
<sequence id="sequence_0" name="2BHD_STREX" length="255" weight="1.000000" />
<sequence id="sequence_1" name="3BHD_COMTE" length="253" weight="1.000000" />
<sequence id="sequence_2" name="ADH_DROME" length="255" weight="1.000000" />
<sequence id="sequence_3" name="AP27_MOUSE" length="244" weight="1.000000" />
<sequence id="sequence_4" name="BA72_EUBSP" length="249" weight="1.000000" />
<sequence id="sequence_5" name="BDH_HUMAN" length="343" weight="1.000000" />
<sequence id="sequence_6" name="BPHB_PSEPS" length="275" weight="1.000000" />
<sequence id="sequence_7" name="BUDC_KLETE" length="241" weight="1.000000" />
<sequence id="sequence_8" name="DHES_HUMAN" length="327" weight="1.000000" />
<sequence id="sequence_9" name="DHGB_BACME" length="262" weight="1.000000" />
<sequence id="sequence_10" name="DHII_HUMAN" length="292" weight="1.000000" />
<sequence id="sequence_11" name="DHMA_FLAS1" length="270" weight="1.000000" />
<sequence id="sequence_12" name="ENTA_ECOLI" length="248" weight="1.000000" />
<sequence id="sequence_13" name="FIXR_BRAJA" length="278" weight="1.000000" />
<sequence id="sequence_14" name="GUTD_ECOLI" length="259" weight="1.000000" />
<sequence id="sequence_15" name="HDE_CANTR" length="906" weight="1.000000" />
<sequence id="sequence_16" name="HDHA_ECOLI" length="255" weight="1.000000" />
<sequence id="sequence_17" name="LIGD_PSEPA" length="305" weight="1.000000" />
<sequence id="sequence_18" name="NODG_RHIME" length="245" weight="1.000000" />
<sequence id="sequence_19" name="RIDH_KLEAE" length="249" weight="1.000000" />
<sequence id="sequence_20" name="YINL_LISMO" length="248" weight="1.000000" />
<sequence id="sequence_21" name="YRTP_BACSU" length="238" weight="1.000000" />
<sequence id="sequence_22" name="CSGA_MYXXA" length="166" weight="1.000000" />
<sequence id="sequence_23" name="DHB2_HUMAN" length="387" weight="1.000000" />
<sequence id="sequence_24" name="DHB3_HUMAN" length="310" weight="1.000000" />
<sequence id="sequence_25" name="DHCA_HUMAN" length="276" weight="1.000000" />
<sequence id="sequence_26" name="FABI_ECOLI" length="262" weight="1.000000" />
<sequence id="sequence_27" name="FVT1_HUMAN" length="332" weight="1.000000" />
<sequence id="sequence_28" name="HMTR_LEIMA" length="287" weight="1.000000" />
<sequence id="sequence_29" name="MAS1_AGRRA" length="476" weight="1.000000" />
<sequence id="sequence_30" name="PCR_PEA" length="399" weight="1.000000" />
<sequence id="sequence_31" name="RFBB_NEIGO" length="346" weight="1.000000" />
<sequence id="sequence_32" name="YURA_MYXXA" length="258" weight="1.000000" />
<letter_frequencies>
<alphabet_array>
<value letter_id="A">0.111</value>
<value letter_id="C">0.0121</value>
<value letter_id="D">0.0502</value>
<value letter_id="E">0.0553</value>
<value letter_id="F">0.0359</value>
<value letter_id="G">0.0898</value>
<value letter_id="H">0.0182</value>
<value letter_id="I">0.0566</value>
<value letter_id="K">0.0518</value>
<value letter_id="L">0.0919</value>
<value letter_id="M">0.0272</value>
<value letter_id="N">0.0405</value>
<value letter_id="P">0.0405</value>
<value letter_id="Q">0.0294</value>
<value letter_id="R">0.0494</value>
<value letter_id="S">0.0637</value>
<value letter_id="T">0.0565</value>
<value letter_id="V">0.083</value>
<value letter_id="W">0.0095</value>
<value letter_id="Y">0.027</value>
</alphabet_array>
</letter_frequencies>
</training_set>
<model>
<command_line>meme -nsites 27 common/adh.s -oc results/meme32 -mod zoops -protein -nmotifs 2 -objfun se -w 12 -hsfrac 0.6 -shuf 2 -nostatus -mpi </command_line>
<host>Timothys-Mac-Mini.local</host>
<type>zoops</type>
<nmotifs>2</nmotifs>
<evalue_threshold>inf</evalue_threshold>
<object_function>Selective mHG</object_function>
<spfun>log likelihood ratio (LLR)</spfun>
<min_width>12</min_width>
<max_width>12</max_width>
<substring>yes</substring>
<minsites>27</minsites>
<maxsites>27</maxsites>
<wnsites>0.8</wnsites>
<spmap>pam</spmap>
<spfuzz>120</spfuzz>
<prior>megap</prior>
<beta>49975</beta>
<maxiter>50</maxiter>
<distance>1e-05</distance>
<num_positions>9996</num_positions>
<seed>0</seed>
<hsfrac>0.6</hsfrac>
<searchsize>9996</searchsize>
<maxsize>0</maxsize>
<norand>no</norand>
<strands>none</strands>
<brief>1000</brief>
<psp_file></psp_file>
<priors_file>prior30.plib</priors_file>
<reason_for_stopping>Stopped because requested number of motifs (2) found.</reason_for_stopping>
<background_frequencies source="--sequences--" order="0">
<alphabet_array>
<value letter_id="A">0.111</value>
<value letter_id="C">0.0122</value>
<value letter_id="D">0.0502</value>
<value letter_id="E">0.0553</value>
<value letter_id="F">0.0359</value>
<value letter_id="G">0.0898</value>
<value letter_id="H">0.0183</value>
<value letter_id="I">0.0566</value>
<value letter_id="K">0.0518</value>
<value letter_id="L">0.0919</value>
<value letter_id="M">0.0273</value>
<value letter_id="N">0.0405</value>
<value letter_id="P">0.0405</value>
<value letter_id="Q">0.0295</value>
<value letter_id="R">0.0494</value>
<value letter_id="S">0.0637</value>
<value letter_id="T">0.0565</value>
<value letter_id="V">0.083</value>
<value letter_id="W">0.00959</value>
<value letter_id="Y">0.0271</value>
</alphabet_array>
</background_frequencies>
</model>
<motifs>
<motif id="motif_1" name="XDLKGKNVLVTG" alt="MEME-1" width="12" sites="27" ic="25.2" re="21.4" llr="400" p_value="8.3e-006" e_value="8.3e-006" bayes_threshold="8.47468" elapsed_time="0.163588">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-119</value>
<value letter_id="C">-293</value>
<value letter_id="D">-186</value>
<value letter_id="E">56</value>
<value letter_id="F">75</value>
<value letter_id="G">-45</value>
<value letter_id="H">-128</value>
<value letter_id="I">-332</value>
<value letter_id="K">68</value>
<value letter_id="L">5</value>
<value letter_id="M">212</value>
<value letter_id="N">81</value>
<value letter_id="P">-274</value>
<value letter_id="Q">135</value>
<value letter_id="R">57</value>
<value letter_id="S">-38</value>
<value letter_id="T">36</value>
<value letter_id="V">-34</value>
<value letter_id="W">-307</value>
<value letter_id="Y">-256</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-119</value>
<value letter_id="C">-296</value>
<value letter_id="D">188</value>
<value letter_id="E">159</value>
<value letter_id="F">-17</value>
<value letter_id="G">-335</value>
<value letter_id="H">-127</value>
<value letter_id="I">-337</value>
<value letter_id="K">8</value>
<value letter_id="L">-324</value>
<value letter_id="M">28</value>
<value letter_id="N">-147</value>
<value letter_id="P">63</value>
<value letter_id="Q">67</value>
<value letter_id="R">57</value>
<value letter_id="S">73</value>
<value letter_id="T">83</value>
<value letter_id="V">-330</value>
<value letter_id="W">-308</value>
<value letter_id="Y">29</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-415</value>
<value letter_id="C">68</value>
<value letter_id="D">-499</value>
<value letter_id="E">-142</value>
<value letter_id="F">-38</value>
<value letter_id="G">-544</value>
<value letter_id="H">-333</value>
<value letter_id="I">0</value>
<value letter_id="K">-390</value>
<value letter_id="L">306</value>
<value letter_id="M">-70</value>
<value letter_id="N">-426</value>
<value letter_id="P">-393</value>
<value letter_id="Q">-288</value>
<value letter_id="R">-359</value>
<value letter_id="S">-398</value>
<value letter_id="T">-336</value>
<value letter_id="V">-67</value>
<value letter_id="W">-288</value>
<value letter_id="Y">-311</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-7</value>
<value letter_id="C">130</value>
<value letter_id="D">-24</value>
<value letter_id="E">-5</value>
<value letter_id="F">-333</value>
<value letter_id="G">45</value>
<value letter_id="H">-127</value>
<value letter_id="I">-74</value>
<value letter_id="K">144</value>
<value letter_id="L">-324</value>
<value letter_id="M">-257</value>
<value letter_id="N">-147</value>
<value letter_id="P">-23</value>
<value letter_id="Q">181</value>
<value letter_id="R">57</value>
<value letter_id="S">108</value>
<value letter_id="T">36</value>
<value letter_id="V">-330</value>
<value letter_id="W">-308</value>
<value letter_id="Y">-256</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-246</value>
<value letter_id="C">-296</value>
<value letter_id="D">-25</value>
<value letter_id="E">-5</value>
<value letter_id="F">-334</value>
<value letter_id="G">208</value>
<value letter_id="H">98</value>
<value letter_id="I">-339</value>
<value letter_id="K">68</value>
<value letter_id="L">-127</value>
<value letter_id="M">-258</value>
<value letter_id="N">8</value>
<value letter_id="P">117</value>
<value letter_id="Q">66</value>
<value letter_id="R">-14</value>
<value letter_id="S">-38</value>
<value letter_id="T">-37</value>
<value letter_id="V">-331</value>
<value letter_id="W">-309</value>
<value letter_id="Y">-257</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-121</value>
<value letter_id="C">-298</value>
<value letter_id="D">-190</value>
<value letter_id="E">-8</value>
<value letter_id="F">-337</value>
<value letter_id="G">-129</value>
<value letter_id="H">96</value>
<value letter_id="I">-340</value>
<value letter_id="K">324</value>
<value letter_id="L">-48</value>
<value letter_id="M">-261</value>
<value letter_id="N">-152</value>
<value letter_id="P">-25</value>
<value letter_id="Q">64</value>
<value letter_id="R">-13</value>
<value letter_id="S">-168</value>
<value letter_id="T">-39</value>
<value letter_id="V">-119</value>
<value letter_id="W">-311</value>
<value letter_id="Y">-260</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">27</value>
<value letter_id="C">-296</value>
<value letter_id="D">-24</value>
<value letter_id="E">-114</value>
<value letter_id="F">-333</value>
<value letter_id="G">-45</value>
<value letter_id="H">182</value>
<value letter_id="I">-338</value>
<value letter_id="K">111</value>
<value letter_id="L">-325</value>
<value letter_id="M">-257</value>
<value letter_id="N">195</value>
<value letter_id="P">-273</value>
<value letter_id="Q">67</value>
<value letter_id="R">-14</value>
<value letter_id="S">-38</value>
<value letter_id="T">36</value>
<value letter_id="V">86</value>
<value letter_id="W">-309</value>
<value letter_id="Y">-256</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">65</value>
<value letter_id="C">-337</value>
<value letter_id="D">-723</value>
<value letter_id="E">-684</value>
<value letter_id="F">-443</value>
<value letter_id="G">-743</value>
<value letter_id="H">-684</value>
<value letter_id="I">254</value>
<value letter_id="K">-676</value>
<value letter_id="L">-108</value>
<value letter_id="M">-354</value>
<value letter_id="N">-650</value>
<value letter_id="P">-664</value>
<value letter_id="Q">-652</value>
<value letter_id="R">-716</value>
<value letter_id="S">-627</value>
<value letter_id="T">-436</value>
<value letter_id="V">240</value>
<value letter_id="W">-624</value>
<value letter_id="Y">-560</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-129</value>
<value letter_id="C">-168</value>
<value letter_id="D">-469</value>
<value letter_id="E">-391</value>
<value letter_id="F">-205</value>
<value letter_id="G">-436</value>
<value letter_id="H">-277</value>
<value letter_id="I">136</value>
<value letter_id="K">-358</value>
<value letter_id="L">186</value>
<value letter_id="M">-145</value>
<value letter_id="N">-24</value>
<value letter_id="P">-382</value>
<value letter_id="Q">-294</value>
<value letter_id="R">167</value>
<value letter_id="S">-289</value>
<value letter_id="T">-40</value>
<value letter_id="V">52</value>
<value letter_id="W">175</value>
<value letter_id="Y">41</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-494</value>
<value letter_id="C">-334</value>
<value letter_id="D">-708</value>
<value letter_id="E">-68</value>
<value letter_id="F">-452</value>
<value letter_id="G">-743</value>
<value letter_id="H">-680</value>
<value letter_id="I">254</value>
<value letter_id="K">-670</value>
<value letter_id="L">-338</value>
<value letter_id="M">-362</value>
<value letter_id="N">-648</value>
<value letter_id="P">-656</value>
<value letter_id="Q">-654</value>
<value letter_id="R">-706</value>
<value letter_id="S">-630</value>
<value letter_id="T">-432</value>
<value letter_id="V">288</value>
<value letter_id="W">-643</value>
<value letter_id="Y">-574</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-364</value>
<value letter_id="C">-242</value>
<value letter_id="D">-411</value>
<value letter_id="E">-450</value>
<value letter_id="F">-430</value>
<value letter_id="G">-494</value>
<value letter_id="H">-357</value>
<value letter_id="I">-340</value>
<value letter_id="K">-372</value>
<value letter_id="L">-456</value>
<value letter_id="M">-321</value>
<value letter_id="N">177</value>
<value letter_id="P">-428</value>
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<site>
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<right_flank>VGPGLSVLVD</right_flank>
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<left_flank>MYTYLSGQEL</left_flank>
<site>
<letter_ref letter_id="L"/>
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<right_flank>GDCGLGHALC</right_flank>
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<contributing_site sequence_id="sequence_32" position="175" strand="none" pvalue="4.80e-07" >
<left_flank>FLSTFMESLR</left_flank>
<site>
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<right_flank>IYPGFVKSEL</right_flank>
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<left_flank>MVSPLISPKP</left_flank>
<site>
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<letter_ref letter_id="L"/>
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<letter_ref letter_id="V"/>
<letter_ref letter_id="V"/>
<letter_ref letter_id="V"/>
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<right_flank>GSSGIGKCIA</right_flank>
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<left_flank>AVRGLTQTAA</left_flank>
<site>
<letter_ref letter_id="R"/>
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<right_flank>FCPGIVKTPM</right_flank>
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<letter_ref letter_id="I"/>
<letter_ref letter_id="R"/>
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<letter_ref letter_id="R"/>
<letter_ref letter_id="V"/>
<letter_ref letter_id="V"/>
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<left_flank>MLLFYASPKA</left_flank>
<site>
<letter_ref letter_id="S"/>
<letter_ref letter_id="Y"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="T"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="Q"/>
<letter_ref letter_id="S"/>
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<letter_ref letter_id="N"/>
<letter_ref letter_id="V"/>
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<right_flank>GQVMF</right_flank>
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<left_flank>ETTKLLKTIF</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="Q"/>
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<letter_ref letter_id="T"/>
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<letter_ref letter_id="V"/>
<letter_ref letter_id="L"/>
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<letter_ref letter_id="G"/>
</site>
<right_flank>AGILDDHQIE</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_29" position="358" strand="none" pvalue="1.53e-05" >
<left_flank>YINCVAPLRM</left_flank>
<site>
<letter_ref letter_id="T"/>
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<letter_ref letter_id="L"/>
<letter_ref letter_id="Y"/>
<letter_ref letter_id="E"/>
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</site>
<right_flank>SGRIVNINSM</right_flank>
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</motif>
<motif id="motif_2" name="ASSGIGKATAKA" alt="MEME-2" width="12" sites="27" ic="28.1" re="22.8" llr="427" p_value="4.8e-003" e_value="4.8e-003" bayes_threshold="8.47468" elapsed_time="0.286448">
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<value letter_id="V">-404</value>
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<value letter_id="Y">-548</value>
</alphabet_array>
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<value letter_id="D">65</value>
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<value letter_id="F">-502</value>
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<value letter_id="I">-532</value>
<value letter_id="K">-284</value>
<value letter_id="L">-137</value>
<value letter_id="M">-469</value>
<value letter_id="N">100</value>
<value letter_id="P">-408</value>
<value letter_id="Q">-247</value>
<value letter_id="R">-355</value>
<value letter_id="S">212</value>
<value letter_id="T">-51</value>
<value letter_id="V">-510</value>
<value letter_id="W">-485</value>
<value letter_id="Y">-410</value>
</alphabet_array>
<alphabet_array>
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<value letter_id="C">130</value>
<value letter_id="D">-24</value>
<value letter_id="E">-115</value>
<value letter_id="F">-334</value>
<value letter_id="G">7</value>
<value letter_id="H">-127</value>
<value letter_id="I">-338</value>
<value letter_id="K">170</value>
<value letter_id="L">-325</value>
<value letter_id="M">-258</value>
<value letter_id="N">-148</value>
<value letter_id="P">-274</value>
<value letter_id="Q">67</value>
<value letter_id="R">168</value>
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<value letter_id="V">-331</value>
<value letter_id="W">-309</value>
<value letter_id="Y">29</value>
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<value letter_id="F">-474</value>
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<value letter_id="I">-493</value>
<value letter_id="K">-348</value>
<value letter_id="L">-537</value>
<value letter_id="M">-439</value>
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<value letter_id="Q">-363</value>
<value letter_id="R">-121</value>
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<value letter_id="T">-399</value>
<value letter_id="V">-479</value>
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<value letter_id="Y">-418</value>
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<value letter_id="F">-1</value>
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<value letter_id="I">350</value>
<value letter_id="K">-578</value>
<value letter_id="L">142</value>
<value letter_id="M">-195</value>
<value letter_id="N">-574</value>
<value letter_id="P">-600</value>
<value letter_id="Q">-508</value>
<value letter_id="R">-594</value>
<value letter_id="S">-563</value>
<value letter_id="T">-443</value>
<value letter_id="V">-55</value>
<value letter_id="W">-420</value>
<value letter_id="Y">-432</value>
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<alphabet_array>
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<value letter_id="F">-485</value>
<value letter_id="G">335</value>
<value letter_id="H">-342</value>
<value letter_id="I">-505</value>
<value letter_id="K">-362</value>
<value letter_id="L">-547</value>
<value letter_id="M">-451</value>
<value letter_id="N">-274</value>
<value letter_id="P">-423</value>
<value letter_id="Q">-375</value>
<value letter_id="R">-366</value>
<value letter_id="S">-290</value>
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<value letter_id="V">-487</value>
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<value letter_id="Y">-431</value>
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<alphabet_array>
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<value letter_id="D">-237</value>
<value letter_id="E">-161</value>
<value letter_id="F">80</value>
<value letter_id="G">-130</value>
<value letter_id="H">185</value>
<value letter_id="I">-356</value>
<value letter_id="K">237</value>
<value letter_id="L">78</value>
<value letter_id="M">-286</value>
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<value letter_id="Q">61</value>
<value letter_id="R">200</value>
<value letter_id="S">-208</value>
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<value letter_id="W">-335</value>
<value letter_id="Y">31</value>
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<value letter_id="H">68</value>
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<value letter_id="K">-275</value>
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<value letter_id="R">-328</value>
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<value letter_id="Y">-377</value>
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<alphabet_array>
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<value letter_id="R">-359</value>
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<value letter_id="Y">130</value>
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<alphabet_array>
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<alphabet_array>
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<value letter_id="L">50</value>
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</alphabet_matrix>
</scores>
<probabilities>
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</alphabet_matrix>
</probabilities>
<regular_expression>
[AG][SGA]SG[IL]G[KR]A[TI]AKX
</regular_expression>
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<contributing_site sequence_id="sequence_13" position="43" strand="none" pvalue="6.73e-11" >
<left_flank>GEPKVMLLTG</left_flank>
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<letter_ref letter_id="L"/>
</site>
<right_flank>FSEAGWRIIS</right_flank>
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<contributing_site sequence_id="sequence_27" position="39" strand="none" pvalue="2.36e-10" >
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<site>
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<letter_ref letter_id="E"/>
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<right_flank>CYKQGAFITL</right_flank>
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<contributing_site sequence_id="sequence_20" position="12" strand="none" pvalue="3.60e-10" >
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<letter_ref letter_id="T"/>
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<letter_ref letter_id="L"/>
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<right_flank>LAEKGAKLVL</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_7" position="9" strand="none" pvalue="4.14e-10" >
<left_flank>MQKVALVTG</left_flank>
<site>
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<letter_ref letter_id="R"/>
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<site>
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<letter_ref letter_id="G"/>
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<letter_ref letter_id="A"/>
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<right_flank>LAKEGVNIGL</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_30" position="93" strand="none" pvalue="1.02e-09" >
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<site>
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<right_flank>LAESGKWHVI</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_12" position="12" strand="none" pvalue="3.22e-09" >
<left_flank>FSGKNVWVTG</left_flank>
<site>
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<letter_ref letter_id="A"/>
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<contributing_site sequence_id="sequence_19" position="21" strand="none" pvalue="4.93e-09" >
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<site>
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<right_flank>LLGAGAKVVL</right_flank>
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<site>
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<right_flank>LHASGAKVVA</right_flank>
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<contributing_site sequence_id="sequence_15" position="329" strand="none" pvalue="1.09e-08" >
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<site>
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<letter_ref letter_id="Y"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="K"/>
<letter_ref letter_id="W"/>
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<right_flank>FAKYGAKVVV</right_flank>
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<contributing_site sequence_id="sequence_25" position="11" strand="none" pvalue="2.28e-08" >
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<site>
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<letter_ref letter_id="R"/>
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</site>
<right_flank>LCRLFSGDVV</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_8" position="9" strand="none" pvalue="2.49e-08" >
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<site>
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<letter_ref letter_id="L"/>
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<letter_ref letter_id="R"/>
</site>
<right_flank>LASDPSQSFK</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_11" position="21" strand="none" pvalue="3.23e-08" >
<left_flank>LAGKAAIVTG</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
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<letter_ref letter_id="G"/>
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<letter_ref letter_id="A"/>
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<letter_ref letter_id="A"/>
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<right_flank>YLREGASVVA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_24" position="55" strand="none" pvalue="5.36e-08" >
<left_flank>SMGQWAVITG</left_flank>
<site>
<letter_ref letter_id="A"/>
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<right_flank>LAKRGLNVVL</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_5" position="62" strand="none" pvalue="7.42e-08" >
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<site>
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<right_flank>LHSKGFLVFA</right_flank>
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<contributing_site sequence_id="sequence_23" position="89" strand="none" pvalue="1.02e-07" >
<left_flank>VDQKAVLVTG</left_flank>
<site>
<letter_ref letter_id="G"/>
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<right_flank>LDELGFTVFA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_29" position="252" strand="none" pvalue="1.10e-07" >
<left_flank>HQSPVILVSG</left_flank>
<site>
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<right_flank>LIAHGYRLSL</right_flank>
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<contributing_site sequence_id="sequence_9" position="14" strand="none" pvalue="1.10e-07" >
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<site>
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<right_flank>FATEKAKVVV</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_4" position="13" strand="none" pvalue="1.19e-07" >
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<site>
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<right_flank>FIDNGAKVSI</right_flank>
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<site>
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<right_flank>FVAEAKVAVL</right_flank>
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<contributing_site sequence_id="sequence_2" position="13" strand="none" pvalue="7.25e-07" >
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<site>
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</scanned_sites>
</scanned_sites_summary>
</MEME>
