<?xml version='1.0' encoding='UTF-8' standalone='yes'?>
<!-- Document definition -->
<!DOCTYPE MEME[
<!ELEMENT MEME (
  training_set,
  model, 
  motifs, 
  scanned_sites_summary?
)>
<!ATTLIST MEME 
  version CDATA #REQUIRED
  release CDATA #REQUIRED
>
<!-- Training-set elements -->
<!ELEMENT training_set (alphabet, ambigs, sequence*, letter_frequencies)>
<!ATTLIST training_set datafile CDATA #REQUIRED length CDATA #REQUIRED>
<!ELEMENT alphabet (letter*)>
<!ATTLIST alphabet name CDATA #REQUIRED>
<!ELEMENT ambigs (letter*)>
<!ELEMENT letter EMPTY>
<!ATTLIST letter id ID #REQUIRED>
<!ATTLIST letter symbol CDATA #REQUIRED>
<!ATTLIST letter equals CDATA #IMPLIED>
<!ATTLIST letter aliases CDATA #IMPLIED>
<!ATTLIST letter complement CDATA #IMPLIED>
<!ATTLIST letter name CDATA #IMPLIED>
<!ATTLIST letter colour CDATA #IMPLIED>
<!ELEMENT sequence EMPTY>
<!ATTLIST sequence id ID #REQUIRED
                   name CDATA #REQUIRED
                   length CDATA #REQUIRED
                   weight CDATA #REQUIRED
>
<!ELEMENT letter_frequencies (alphabet_array)>

<!-- Model elements -->
<!ELEMENT model (
  command_line,
  host,
  type,
  nmotifs,
  evalue_threshold,
  object_function,
  min_width,
  max_width,
  minic,
  wg,
  ws,
  endgaps,
  minsites,
  maxsites,
  wnsites,
  prob,
  spmap,
  spfuzz,
  prior,
  beta,
  maxiter,
  distance,
  num_sequences,
  num_positions,
  seed,
  seqfrac,
  strands,
  priors_file,
  reason_for_stopping,
  background_frequencies
)>
<!ELEMENT command_line (#PCDATA)*>
<!ELEMENT host (#PCDATA)*>
<!ELEMENT type (#PCDATA)*>
<!ELEMENT nmotifs (#PCDATA)*>
<!ELEMENT evalue_threshold (#PCDATA)*>
<!ELEMENT object_function (#PCDATA)*>
<!ELEMENT min_width (#PCDATA)*>
<!ELEMENT max_width (#PCDATA)*>
<!ELEMENT minic (#PCDATA)*>
<!ELEMENT wg (#PCDATA)*>
<!ELEMENT ws (#PCDATA)*>
<!ELEMENT endgaps (#PCDATA)*>
<!ELEMENT minsites (#PCDATA)*>
<!ELEMENT maxsites (#PCDATA)*>
<!ELEMENT wnsites (#PCDATA)*>
<!ELEMENT prob (#PCDATA)*>
<!ELEMENT spmap (#PCDATA)*>
<!ELEMENT spfuzz (#PCDATA)*>
<!ELEMENT prior (#PCDATA)*>
<!ELEMENT beta (#PCDATA)*>
<!ELEMENT maxiter (#PCDATA)*>
<!ELEMENT distance (#PCDATA)*>
<!ELEMENT num_sequences (#PCDATA)*>
<!ELEMENT num_positions (#PCDATA)*>
<!ELEMENT seed (#PCDATA)*>
<!ELEMENT seqfrac (#PCDATA)*>
<!ELEMENT strands (#PCDATA)*>
<!ELEMENT priors_file (#PCDATA)*>
<!ELEMENT reason_for_stopping (#PCDATA)*>
<!ELEMENT background_frequencies (alphabet_array)>
<!ATTLIST background_frequencies source CDATA #REQUIRED>

<!-- Motif elements -->
<!ELEMENT motifs (motif*)>
<!ELEMENT motif (scores, probabilities, regular_expression?, contributing_sites)>
<!ATTLIST motif id ID #REQUIRED
                name CDATA #REQUIRED
                width CDATA #REQUIRED
                sites CDATA #REQUIRED
                llr CDATA #REQUIRED
                ic CDATA #REQUIRED
                re CDATA #REQUIRED
                bayes_threshold CDATA #REQUIRED
                e_value CDATA #REQUIRED
                elapsed_time CDATA #REQUIRED
                url CDATA ""
>
<!ELEMENT scores (alphabet_matrix)>
<!ELEMENT probabilities (alphabet_matrix)>
<!ELEMENT regular_expression (#PCDATA)*>

<!-- Contributing site elements -->
<!-- Contributing sites are motif occurences found during the motif discovery phase -->
<!ELEMENT contributing_sites (contributing_site*)>
<!ELEMENT contributing_site (left_flank, site, right_flank)>
<!ATTLIST contributing_site sequence_id IDREF #REQUIRED
                          position CDATA #REQUIRED
                          strand (plus|minus|none) 'none'
                          pvalue CDATA #REQUIRED
>
<!-- The left_flank contains the sequence for 10 bases to the left of the motif start -->
<!ELEMENT left_flank (#PCDATA)>
<!-- The site contains the sequence for the motif instance -->
<!ELEMENT site (letter_ref*)>
<!-- The right_flank contains the sequence for 10 bases to the right of the motif end -->
<!ELEMENT right_flank (#PCDATA)>

<!-- Scanned site elements -->
<!-- Scanned sites are motif occurences found during the sequence scan phase -->
<!ELEMENT scanned_sites_summary (scanned_sites*)>
<!ATTLIST scanned_sites_summary p_thresh CDATA #REQUIRED>
<!ELEMENT scanned_sites (scanned_site*)>
<!ATTLIST scanned_sites sequence_id IDREF #REQUIRED
                        pvalue CDATA #REQUIRED
                        num_sites CDATA #REQUIRED>
<!ELEMENT scanned_site EMPTY>
<!ATTLIST scanned_site  motif_id IDREF #REQUIRED
                        strand (plus|minus|none) 'none'
                        position CDATA #REQUIRED
                        pvalue CDATA #REQUIRED>

<!-- Utility elements -->
<!-- A reference to a letter in the alphabet -->
<!ELEMENT letter_ref EMPTY>
<!ATTLIST letter_ref letter_id IDREF #REQUIRED>
<!-- A alphabet-array contains one floating point value for each letter in an alphabet -->
<!ELEMENT alphabet_array (value*)>
<!ELEMENT value (#PCDATA)>
<!ATTLIST value letter_id IDREF #REQUIRED>

<!-- A alphabet_matrix contains one alphabet_array for each position in a motif -->
<!ELEMENT alphabet_matrix (alphabet_array*)>

]>
<!-- Begin document body -->
<MEME version="4.10.2" release="Thu Sep 03 15:00:54 2015 -0700">
<training_set datafile="Puf3p-200.s" length="200">
<alphabet name="RNA" like="rna">
<letter id="A" symbol="A" name="Adenine" colour="CC0000"/>
<letter id="C" symbol="C" name="Cytosine" colour="0000CC"/>
<letter id="G" symbol="G" name="Guanine" colour="FFB300"/>
<letter id="U" symbol="U" aliases="T" name="Uracil" colour="008000"/>
<letter id="N" symbol="N" aliases="X." equals="ACGU" name="Any base"/>
<letter id="V" symbol="V" equals="ACG" name="Not U"/>
<letter id="H" symbol="H" equals="ACU" name="Not G"/>
<letter id="D" symbol="D" equals="AGU" name="Not C"/>
<letter id="B" symbol="B" equals="CGU" name="Not A"/>
<letter id="M" symbol="M" equals="AC" name="Amino"/>
<letter id="R" symbol="R" equals="AG" name="Purine"/>
<letter id="W" symbol="W" equals="AU" name="Weak"/>
<letter id="S" symbol="S" equals="CG" name="Strong"/>
<letter id="Y" symbol="Y" equals="CU" name="Pyrimidine"/>
<letter id="K" symbol="K" equals="GU" name="Keto"/>
</alphabet>
<sequence id="sequence_0" name="sacCer3_chrI_48232_48332_+" length="100" weight="1.000000" />
<sequence id="sequence_1" name="sacCer3_chrI_71777_71877_+" length="100" weight="1.000000" />
<sequence id="sequence_2" name="sacCer3_chrI_72016_72116_+" length="100" weight="1.000000" />
<sequence id="sequence_3" name="sacCer3_chrI_73291_73391_+" length="100" weight="1.000000" />
<sequence id="sequence_4" name="sacCer3_chrI_73321_73421_+" length="100" weight="1.000000" />
<sequence id="sequence_5" name="sacCer3_chrI_73356_73456_+" length="100" weight="1.000000" />
<sequence id="sequence_6" name="sacCer3_chrI_79455_79555_+" length="100" weight="1.000000" />
<sequence id="sequence_7" name="sacCer3_chrI_93336_93436_+" length="100" weight="1.000000" />
<sequence id="sequence_8" name="sacCer3_chrI_120749_120849_+" length="100" weight="1.000000" />
<sequence id="sequence_9" name="sacCer3_chrI_142343_142443_+" length="100" weight="1.000000" />
<sequence id="sequence_10" name="sacCer3_chrI_142963_143063_+" length="100" weight="1.000000" />
<sequence id="sequence_11" name="sacCer3_chrI_143283_143383_+" length="100" weight="1.000000" />
<sequence id="sequence_12" name="sacCer3_chrI_56912_57012_-" length="100" weight="1.000000" />
<sequence id="sequence_13" name="sacCer3_chrI_74949_75049_-" length="100" weight="1.000000" />
<sequence id="sequence_14" name="sacCer3_chrI_90825_90925_-" length="100" weight="1.000000" />
<sequence id="sequence_15" name="sacCer3_chrI_106130_106230_-" length="100" weight="1.000000" />
<sequence id="sequence_16" name="sacCer3_chrI_139363_139463_-" length="100" weight="1.000000" />
<sequence id="sequence_17" name="sacCer3_chrI_139577_139677_-" length="100" weight="1.000000" />
<sequence id="sequence_18" name="sacCer3_chrI_141262_141362_-" length="100" weight="1.000000" />
<sequence id="sequence_19" name="sacCer3_chrI_150820_150920_-" length="100" weight="1.000000" />
<sequence id="sequence_20" name="sacCer3_chrII_38816_38916_+" length="100" weight="1.000000" />
<sequence id="sequence_21" name="sacCer3_chrII_93391_93491_+" length="100" weight="1.000000" />
<sequence id="sequence_22" name="sacCer3_chrII_111177_111277_+" length="100" weight="1.000000" />
<sequence id="sequence_23" name="sacCer3_chrII_146864_146964_+" length="100" weight="1.000000" />
<sequence id="sequence_24" name="sacCer3_chrII_169390_169490_+" length="100" weight="1.000000" />
<sequence id="sequence_25" name="sacCer3_chrII_174563_174663_+" length="100" weight="1.000000" />
<sequence id="sequence_26" name="sacCer3_chrII_236818_236918_+" length="100" weight="1.000000" />
<sequence id="sequence_27" name="sacCer3_chrII_236884_236984_+" length="100" weight="1.000000" />
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<sequence id="sequence_34" name="sacCer3_chrII_316594_316694_+" length="100" weight="1.000000" />
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<sequence id="sequence_152" name="sacCer3_chrIV_412985_413085_+" length="100" weight="1.000000" />
<sequence id="sequence_153" name="sacCer3_chrIV_413013_413113_+" length="100" weight="1.000000" />
<sequence id="sequence_154" name="sacCer3_chrIV_428446_428546_+" length="100" weight="1.000000" />
<sequence id="sequence_155" name="sacCer3_chrIV_428482_428582_+" length="100" weight="1.000000" />
<sequence id="sequence_156" name="sacCer3_chrIV_439325_439425_+" length="100" weight="1.000000" />
<sequence id="sequence_157" name="sacCer3_chrIV_449243_449343_+" length="100" weight="1.000000" />
<sequence id="sequence_158" name="sacCer3_chrIV_453676_453776_+" length="100" weight="1.000000" />
<sequence id="sequence_159" name="sacCer3_chrIV_453710_453810_+" length="100" weight="1.000000" />
<sequence id="sequence_160" name="sacCer3_chrIV_472669_472769_+" length="100" weight="1.000000" />
<sequence id="sequence_161" name="sacCer3_chrIV_490901_491001_+" length="100" weight="1.000000" />
<sequence id="sequence_162" name="sacCer3_chrIV_503889_503989_+" length="100" weight="1.000000" />
<sequence id="sequence_163" name="sacCer3_chrIV_508734_508834_+" length="100" weight="1.000000" />
<sequence id="sequence_164" name="sacCer3_chrIV_509148_509248_+" length="100" weight="1.000000" />
<sequence id="sequence_165" name="sacCer3_chrIV_509285_509385_+" length="100" weight="1.000000" />
<sequence id="sequence_166" name="sacCer3_chrIV_509454_509554_+" length="100" weight="1.000000" />
<sequence id="sequence_167" name="sacCer3_chrIV_540425_540525_+" length="100" weight="1.000000" />
<sequence id="sequence_168" name="sacCer3_chrIV_540508_540608_+" length="100" weight="1.000000" />
<sequence id="sequence_169" name="sacCer3_chrIV_552956_553056_+" length="100" weight="1.000000" />
<sequence id="sequence_170" name="sacCer3_chrIV_564798_564898_+" length="100" weight="1.000000" />
<sequence id="sequence_171" name="sacCer3_chrIV_576910_577010_+" length="100" weight="1.000000" />
<sequence id="sequence_172" name="sacCer3_chrIV_580425_580525_+" length="100" weight="1.000000" />
<sequence id="sequence_173" name="sacCer3_chrIV_592860_592960_+" length="100" weight="1.000000" />
<sequence id="sequence_174" name="sacCer3_chrIV_600891_600991_+" length="100" weight="1.000000" />
<sequence id="sequence_175" name="sacCer3_chrIV_602048_602148_+" length="100" weight="1.000000" />
<sequence id="sequence_176" name="sacCer3_chrIV_603412_603512_+" length="100" weight="1.000000" />
<sequence id="sequence_177" name="sacCer3_chrIV_632011_632111_+" length="100" weight="1.000000" />
<sequence id="sequence_178" name="sacCer3_chrIV_632874_632974_+" length="100" weight="1.000000" />
<sequence id="sequence_179" name="sacCer3_chrIV_682181_682281_+" length="100" weight="1.000000" />
<sequence id="sequence_180" name="sacCer3_chrIV_695255_695355_+" length="100" weight="1.000000" />
<sequence id="sequence_181" name="sacCer3_chrIV_704944_705044_+" length="100" weight="1.000000" />
<sequence id="sequence_182" name="sacCer3_chrIV_705300_705400_+" length="100" weight="1.000000" />
<sequence id="sequence_183" name="sacCer3_chrIV_762742_762842_+" length="100" weight="1.000000" />
<sequence id="sequence_184" name="sacCer3_chrIV_773623_773723_+" length="100" weight="1.000000" />
<sequence id="sequence_185" name="sacCer3_chrIV_840392_840492_+" length="100" weight="1.000000" />
<sequence id="sequence_186" name="sacCer3_chrIV_893923_894023_+" length="100" weight="1.000000" />
<sequence id="sequence_187" name="sacCer3_chrIV_911306_911406_+" length="100" weight="1.000000" />
<sequence id="sequence_188" name="sacCer3_chrIV_915932_916032_+" length="100" weight="1.000000" />
<sequence id="sequence_189" name="sacCer3_chrIV_915979_916079_+" length="100" weight="1.000000" />
<sequence id="sequence_190" name="sacCer3_chrIV_917163_917263_+" length="100" weight="1.000000" />
<sequence id="sequence_191" name="sacCer3_chrIV_924868_924968_+" length="100" weight="1.000000" />
<sequence id="sequence_192" name="sacCer3_chrIV_927369_927469_+" length="100" weight="1.000000" />
<sequence id="sequence_193" name="sacCer3_chrIV_929172_929272_+" length="100" weight="1.000000" />
<sequence id="sequence_194" name="sacCer3_chrIV_937531_937631_+" length="100" weight="1.000000" />
<sequence id="sequence_195" name="sacCer3_chrIV_961374_961474_+" length="100" weight="1.000000" />
<sequence id="sequence_196" name="sacCer3_chrIV_1055284_1055384_+" length="100" weight="1.000000" />
<sequence id="sequence_197" name="sacCer3_chrIV_1068362_1068462_+" length="100" weight="1.000000" />
<sequence id="sequence_198" name="sacCer3_chrIV_1093820_1093920_+" length="100" weight="1.000000" />
<sequence id="sequence_199" name="sacCer3_chrIV_1111675_1111775_+" length="100" weight="1.000000" />
<letter_frequencies>
<alphabet_array>
<value letter_id="A">0.323</value>
<value letter_id="C">0.170</value>
<value letter_id="G">0.142</value>
<value letter_id="U">0.365</value>
</alphabet_array>
</letter_frequencies>
</training_set>
<model>
<command_line>meme -rna -nmotifs 3 -oc motif.Puf3p Puf3p-200.s </command_line>
<host>IMB12-010665</host>
<type>zoops</type>
<nmotifs>3</nmotifs>
<evalue_threshold>inf</evalue_threshold>
<object_function>E-value of product of p-values</object_function>
<use_llr>0</use_llr>
<min_width>8</min_width>
<max_width>50</max_width>
<wg>11</wg>
<ws>1</ws>
<endgaps>yes</endgaps>
<substring>yes</substring>
<minsites>2</minsites>
<maxsites>200</maxsites>
<wnsites>0.8</wnsites>
<spmap>uni</spmap>
<spfuzz>0.5</spfuzz>
<prior>dirichlet</prior>
<beta>0.01</beta>
<maxiter>50</maxiter>
<distance>1e-05</distance>
<num_sequences>200</num_sequences>
<num_positions>20000</num_positions>
<seed>0</seed>
<ctfrac>-1</ctfrac>
<maxwords>-1</maxwords>
<strands>none</strands>
<priors_file></priors_file>
<reason_for_stopping>Stopped because requested number of motifs (3) found.</reason_for_stopping>
<background_frequencies source="dataset with add-one prior applied">
<alphabet_array>
<value letter_id="A">0.323</value>
<value letter_id="C">0.170</value>
<value letter_id="G">0.142</value>
<value letter_id="U">0.365</value>
</alphabet_array>
</background_frequencies>
</model>
<motifs>
<motif id="motif_1" name="1" width="10" sites="64" ic="14.0" re="12.2" llr="539" e_value="3.7e-031" bayes_threshold="9.88709" elapsed_time="41.784644">
<scores>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">-79</value>
<value letter_id="C">177</value>
<value letter_id="G">-1264</value>
<value letter_id="U">-64</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-28</value>
<value letter_id="C">80</value>
<value letter_id="G">-18</value>
<value letter_id="U">-22</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1264</value>
<value letter_id="C">-1264</value>
<value letter_id="G">-1264</value>
<value letter_id="U">145</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1264</value>
<value letter_id="C">-1264</value>
<value letter_id="G">282</value>
<value letter_id="U">-1264</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1264</value>
<value letter_id="C">-12</value>
<value letter_id="G">-1264</value>
<value letter_id="U">121</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">161</value>
<value letter_id="C">-1264</value>
<value letter_id="G">-318</value>
<value letter_id="U">-1264</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">76</value>
<value letter_id="C">-44</value>
<value letter_id="G">-159</value>
<value letter_id="U">-38</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">156</value>
<value letter_id="C">-1264</value>
<value letter_id="G">-159</value>
<value letter_id="U">-1264</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">-1264</value>
<value letter_id="C">-1264</value>
<value letter_id="G">-1264</value>
<value letter_id="U">145</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">161</value>
<value letter_id="C">-1264</value>
<value letter_id="G">-1264</value>
<value letter_id="U">-454</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
<alphabet_matrix>
<alphabet_array>
<value letter_id="A">0.187500</value>
<value letter_id="C">0.578125</value>
<value letter_id="G">0.000000</value>
<value letter_id="U">0.234375</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.265625</value>
<value letter_id="C">0.296875</value>
<value letter_id="G">0.125000</value>
<value letter_id="U">0.312500</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="U">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">1.000000</value>
<value letter_id="U">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.156250</value>
<value letter_id="G">0.000000</value>
<value letter_id="U">0.843750</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.984375</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.015625</value>
<value letter_id="U">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.546875</value>
<value letter_id="C">0.125000</value>
<value letter_id="G">0.046875</value>
<value letter_id="U">0.281250</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.953125</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.046875</value>
<value letter_id="U">0.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.000000</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="U">1.000000</value>
</alphabet_array>
<alphabet_array>
<value letter_id="A">0.984375</value>
<value letter_id="C">0.000000</value>
<value letter_id="G">0.000000</value>
<value letter_id="U">0.015625</value>
</alphabet_array>
</alphabet_matrix>
</probabilities>
<regular_expression>
[CU][UCA]UGUA[AU]AUA
</regular_expression>
<contributing_sites>
<contributing_site sequence_id="sequence_178" position="36" strand="none" pvalue="2.17e-06" >
<left_flank>CAGAAAUGAG</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UCAAUAACUU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_113" position="11" strand="none" pvalue="2.17e-06" >
<left_flank>CGAUUUUUUU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CAAACACAUG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_112" position="42" strand="none" pvalue="2.17e-06" >
<left_flank>CGAUUUUUUU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CAAACACAUG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_110" position="46" strand="none" pvalue="2.17e-06" >
<left_flank>AGAGCCAAAU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CUUUGUCUAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_61" position="48" strand="none" pvalue="2.17e-06" >
<left_flank>AAUAAUAAUA</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UCUCAACAUA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_47" position="45" strand="none" pvalue="2.17e-06" >
<left_flank>GUUCGUUAUU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AAGUUAUAUG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_65" position="8" strand="none" pvalue="3.99e-06" >
<left_flank>UCAAUAUG</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CUAGUUUUCG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_64" position="62" strand="none" pvalue="3.99e-06" >
<left_flank>CUUCAAUAUG</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CUAGUUUUCG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_194" position="41" strand="none" pvalue="1.28e-05" >
<left_flank>UCCCAUUCGU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UAUAAACUGU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_167" position="45" strand="none" pvalue="1.28e-05" >
<left_flank>AGAUUUCGUA</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AAAUAGGUGA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_144" position="37" strand="none" pvalue="1.28e-05" >
<left_flank>AUAACGCGAG</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UCUAUAUACC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_109" position="26" strand="none" pvalue="1.28e-05" >
<left_flank>CCGUUUCGUU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UUCAAAUAUA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_93" position="45" strand="none" pvalue="1.28e-05" >
<left_flank>AUUAGAUAUU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UAUGAGGUCU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_70" position="48" strand="none" pvalue="1.28e-05" >
<left_flank>CUCAAUAUCC</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AAAGGCAGAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_63" position="44" strand="none" pvalue="1.28e-05" >
<left_flank>GUUUGGUAUC</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AAUAUGUGUG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_58" position="44" strand="none" pvalue="1.28e-05" >
<left_flank>UCCUUUUAUA</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UUUUUACCAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_57" position="81" strand="none" pvalue="1.28e-05" >
<left_flank>UCCUUUUAUA</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UUUUUACCA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_199" position="43" strand="none" pvalue="1.64e-05" >
<left_flank>AUUAUAGUAU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UAAAAUAACG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_126" position="49" strand="none" pvalue="1.64e-05" >
<left_flank>CCACCCAUCU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AGAAAAAUAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_114" position="60" strand="none" pvalue="1.64e-05" >
<left_flank>UAAACUUAAG</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GAAACUUAAU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_176" position="56" strand="none" pvalue="4.05e-05" >
<left_flank>AUUAUUCUAA</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CCUGUAUAGU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_151" position="41" strand="none" pvalue="4.05e-05" >
<left_flank>AAGUCAUGGC</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CAAAUUAAAU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_133" position="34" strand="none" pvalue="4.05e-05" >
<left_flank>ACUAUUCAAU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CAUCAUCAAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_120" position="43" strand="none" pvalue="4.05e-05" >
<left_flank>CUGUCGUCUA</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AUCACAGGGA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_106" position="71" strand="none" pvalue="4.05e-05" >
<left_flank>CGAACAUCCU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>ACCUAUUGUA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_105" position="45" strand="none" pvalue="4.05e-05" >
<left_flank>CGAACAUCCU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>ACCUAUUGUA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_95" position="5" strand="none" pvalue="4.05e-05" >
<left_flank>GAACA</left_flank>
<site>
<letter_ref letter_id="U"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GCCAUUGCUU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_74" position="45" strand="none" pvalue="4.05e-05" >
<left_flank>GUUUAAACAU</left_flank>
<site>
<letter_ref letter_id="U"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UUUAAACAUA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_23" position="44" strand="none" pvalue="4.05e-05" >
<left_flank>ACCAUGUAUA</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>ACUAUUGAAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_157" position="43" strand="none" pvalue="4.96e-05" >
<left_flank>GCCUUUUGAU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UAUUACGGUA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_142" position="43" strand="none" pvalue="4.96e-05" >
<left_flank>AAAGAAUCAU</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CUUUUCAGAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_132" position="38" strand="none" pvalue="4.96e-05" >
<left_flank>AAAAACUGUA</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AUCAUAUCAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_169" position="38" strand="none" pvalue="7.93e-05" >
<left_flank>AAUAUACGUU</left_flank>
<site>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AUAUCUUUUU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_54" position="46" strand="none" pvalue="7.93e-05" >
<left_flank>CAGAGAUUAA</left_flank>
<site>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AAAGCAGAAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_29" position="55" strand="none" pvalue="7.93e-05" >
<left_flank>CUAUAUUCUA</left_flank>
<site>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GUUUUUAUAU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_22" position="56" strand="none" pvalue="7.93e-05" >
<left_flank>AAUUCAUCUC</left_flank>
<site>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GUGUUAUACC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_191" position="51" strand="none" pvalue="1.09e-04" >
<left_flank>AUUUUACCCA</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>GUAAAAGACC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_181" position="43" strand="none" pvalue="1.09e-04" >
<left_flank>AAAAUUUGUC</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UUAAAUGGCU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_159" position="2" strand="none" pvalue="1.09e-04" >
<left_flank>AG</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UAUUUUUAUC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_158" position="36" strand="none" pvalue="1.09e-04" >
<left_flank>UCCUUUACAG</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UAUUUUUAUC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_138" position="47" strand="none" pvalue="1.09e-04" >
<left_flank>CUAUCUUUCU</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AUUUCCAGUU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_104" position="48" strand="none" pvalue="1.09e-04" >
<left_flank>UCUUACUAAU</left_flank>
<site>
<letter_ref letter_id="U"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AUAUAGCAUA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_143" position="44" strand="none" pvalue="1.25e-04" >
<left_flank>GGUGCUCUCA</left_flank>
<site>
<letter_ref letter_id="U"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UUUACCACGC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_100" position="44" strand="none" pvalue="1.25e-04" >
<left_flank>UUCAAGAUUA</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AAUAGAGAUG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_72" position="42" strand="none" pvalue="1.25e-04" >
<left_flank>AUAUAUUUUC</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AAAUAGAAAU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_99" position="23" strand="none" pvalue="1.27e-04" >
<left_flank>UAGAUAUAUA</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CACACAUACA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_12" position="6" strand="none" pvalue="1.28e-04" >
<left_flank>AAAGCU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UCACUUUUAG</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_33" position="46" strand="none" pvalue="1.32e-04" >
<left_flank>CAUAUAUCAA</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UCACAGUAAA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_83" position="80" strand="none" pvalue="1.40e-04" >
<left_flank>UAUAAGAGUA</left_flank>
<site>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AUAACAAUUU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_197" position="45" strand="none" pvalue="1.79e-04" >
<left_flank>AAUUUAAAAA</left_flank>
<site>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AAAAAAUAUA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_117" position="44" strand="none" pvalue="1.79e-04" >
<left_flank>UUCCGCUCUA</left_flank>
<site>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UUUACGUAAC</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_111" position="73" strand="none" pvalue="1.79e-04" >
<left_flank>GUAUAUUUUC</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>CAUACAUUCU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_162" position="36" strand="none" pvalue="2.20e-04" >
<left_flank>AUUAUAUAUU</left_flank>
<site>
<letter_ref letter_id="C"/>
<letter_ref letter_id="C"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UUUUUUAACU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_131" position="4" strand="none" pvalue="2.20e-04" >
<left_flank>UUAU</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AAUUUUGUUU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_130" position="48" strand="none" pvalue="2.20e-04" >
<left_flank>UAUUACUUAU</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>AAUUUUGUUU</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_28" position="33" strand="none" pvalue="2.20e-04" >
<left_flank>GAGUUGUAUA</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
</site>
<right_flank>UAUAACUUUA</right_flank>
</contributing_site>
<contributing_site sequence_id="sequence_6" position="44" strand="none" pvalue="2.20e-04" >
<left_flank>UAAAUAGGUA</left_flank>
<site>
<letter_ref letter_id="A"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="G"/>
<letter_ref letter_id="U"/>
<letter_ref letter_id="A"/>
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<alphabet_array>
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<alphabet_array>
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</alphabet_array>
<alphabet_array>
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<value letter_id="U">113</value>
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<alphabet_array>
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<alphabet_array>
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<alphabet_array>
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<alphabet_array>
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<alphabet_array>
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<alphabet_array>
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</alphabet_array>
<alphabet_array>
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<alphabet_array>
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<alphabet_array>
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</alphabet_array>
<alphabet_array>
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<alphabet_array>
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<alphabet_array>
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</alphabet_array>
<alphabet_array>
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</alphabet_array>
<alphabet_array>
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</alphabet_array>
<alphabet_array>
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</alphabet_array>
<alphabet_array>
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</alphabet_array>
<alphabet_array>
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</alphabet_array>
<alphabet_array>
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<value letter_id="U">145</value>
</alphabet_array>
<alphabet_array>
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<value letter_id="U">145</value>
</alphabet_array>
<alphabet_array>
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<value letter_id="C">182</value>
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<value letter_id="U">-897</value>
</alphabet_array>
</alphabet_matrix>
</scores>
<probabilities>
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</alphabet_array>
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</alphabet_array>
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</alphabet_array>
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</alphabet_array>
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</alphabet_array>
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</alphabet_array>
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</alphabet_array>
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</alphabet_array>
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