/******************************************************************************
* Copyright (c) 2014, Pete Gadomski <pete.gadomski@gmail.com>
*
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following
* conditions are met:
*
*     * Redistributions of source code must retain the above copyright
*       notice, this list of conditions and the following disclaimer.
*     * Redistributions in binary form must reproduce the above copyright
*       notice, this list of conditions and the following disclaimer in
*       the documentation and/or other materials provided
*       with the distribution.
*     * Neither the name of Hobu, Inc. or Flaxen Geo Consulting nor the
*       names of its contributors may be used to endorse or promote
*       products derived from this software without specific prior
*       written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
* "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
* LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS
* FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE
* COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT,
* INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
* BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS
* OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED
* AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
* OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT
* OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY
* OF SUCH DAMAGE.
****************************************************************************/

#include "TransformationFilter.hpp"
#include <pdal/util/FileUtils.hpp>

#include <Eigen/Dense>

#include <sstream>

namespace pdal
{

static StaticPluginInfo const s_info
{
    "filters.transformation",
    "Transform each point using a 4x4 transformation matrix",
    "http://pdal.io/stages/filters.transformation.html"
};

CREATE_STATIC_STAGE(TransformationFilter, s_info)

TransformationFilter::Transform::Transform()
{}


TransformationFilter::Transform::Transform(
    const TransformationFilter::Transform::ArrayType& arr) : m_vals(arr)
{}


std::istream& operator>>(std::istream& in,
    pdal::TransformationFilter::Transform& xform)
{
    std::string arg(std::istreambuf_iterator<char>(in), {});
    std::stringstream matrix;
    matrix.str(arg);

    std::string matrix_str;
    if (pdal::FileUtils::fileExists(arg))
    {
        matrix_str = pdal::FileUtils::readFileIntoString(arg);
        matrix.str(matrix_str);
    }

    matrix.seekg(0);

    double entry;

    size_t i = 0;
    while (matrix >> entry)
    {
        if (i + 1 > xform.Size)
        {
            std::stringstream msg;
            msg << "Too many entries in transformation matrix, should be "
                << xform.Size;
            throw pdal_error("filters.transformation: " + msg.str());
        }
        xform[i++] = entry;
    }

    if (i != xform.Size)
    {
        std::stringstream msg;
        msg << "Too few entries in transformation matrix: "
            << i << " (should be " << xform.Size << ")";
        throw pdal_error("filters.transformation: " + msg.str());
    }
    in.clear();

    return in;
}


std::ostream& operator<<(std::ostream& out,
    const pdal::TransformationFilter::Transform& xform)
{
    for (size_t r = 0; r < xform.RowSize; ++r)
    {
        for (size_t c = 0; c < xform.ColSize; ++c)
        {
            if (c != 0)
                out << "  ";
            out << xform[r * xform.ColSize + c];
        }
        out << "\n";
    }
    return out;
}


TransformationFilter::TransformationFilter() : m_matrix(new Transform)
{}


TransformationFilter::~TransformationFilter()
{}


std::string TransformationFilter::getName() const { return s_info.name; }

void TransformationFilter::addArgs(ProgramArgs& args)
{
    args.add("invert", "Apply inverse transformation", m_invert, false);
    args.add("matrix", "Transformation matrix", *m_matrix).setPositional();
    args.add("override_srs", "Spatial reference to apply to data.",
        m_overrideSrs);
}


void TransformationFilter::initialize()
{
    if (! m_overrideSrs.empty())
        setSpatialReference(m_overrideSrs);

    if (m_invert)
    {
        using namespace Eigen;

        Transform& matrix = *m_matrix;

        Affine3d T;
        Matrix4d m;
        m << matrix[0], matrix[1], matrix[2], matrix[3],
             matrix[4], matrix[5], matrix[6], matrix[7],
             matrix[8], matrix[9], matrix[10], matrix[11],
             matrix[12], matrix[13], matrix[14], matrix[15];
        T.matrix() = m;
        Affine3d Tinv = T.inverse();
        matrix[0] = Tinv.matrix()(0,0);
        matrix[1] = Tinv.matrix()(0,1);
        matrix[2] = Tinv.matrix()(0,2);
        matrix[3] = Tinv.matrix()(0,3);
        matrix[4] = Tinv.matrix()(1,0);
        matrix[5] = Tinv.matrix()(1,1);
        matrix[6] = Tinv.matrix()(1,2);
        matrix[7] = Tinv.matrix()(1,3);
        matrix[8] = Tinv.matrix()(2,0);
        matrix[9] = Tinv.matrix()(2,1);
        matrix[10] = Tinv.matrix()(2,2);
        matrix[11] = Tinv.matrix()(2,3);
    }
}


void TransformationFilter::doFilter(PointView& view,
    const TransformationFilter::Transform& matrix)
{
    *m_matrix = matrix;
    filter(view);
}


bool TransformationFilter::processOne(PointRef& point)
{
    Transform& matrix = *m_matrix;

    double x = point.getFieldAs<double>(Dimension::Id::X);
    double y = point.getFieldAs<double>(Dimension::Id::Y);
    double z = point.getFieldAs<double>(Dimension::Id::Z);

    point.setField(Dimension::Id::X,
        x * matrix[0] + y * matrix[1] + z * matrix[2] + matrix[3]);

    point.setField(Dimension::Id::Y,
        x * matrix[4] + y * matrix[5] + z * matrix[6] + matrix[7]);

    point.setField(Dimension::Id::Z,
        x * matrix[8] + y * matrix[9] + z * matrix[10] + matrix[11]);
    return true;
}

void TransformationFilter::spatialReferenceChanged(const SpatialReference& srs)
{
    if (!srs.empty() && !m_overrideSrs.empty())
        log()->get(LogLevel::Warning) << getName() <<
            ": overriding input spatial reference." << std::endl;
}


void TransformationFilter::filter(PointView& view)
{
    if (!view.spatialReference().empty() && !m_overrideSrs.empty())
        log()->get(LogLevel::Warning) << getName() <<
            ": overriding input spatial reference." << std::endl;

    PointRef point(view, 0);
    for (PointId idx = 0; idx < view.size(); ++idx)
    {
        point.setPointId(idx);
        processOne(point);
    }
    view.invalidateProducts();
}

} // namespace pdal
