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Make any search that returns results:\n   ```bash\n   curl -H \"Authorization: token YOUR_TOKEN\" \\\n        \"https://api.github.com/search/issues?q=commit:EXAMPLE_COMMIT_SHA\"\n   ```\n   **Returns**: `{\"total_count\": 1, \"items\": [...]}`\n\n2. Use PyGithub:\n   ```python\n   import github\n   from github import Auth\n\n   auth = Auth.Token(\"YOUR_TOKEN\")\n   gh = github.Github(auth=auth)\n   issues = gh.search_issues(\"commit:EXAMPLE_COMMIT_SHA\")\n   print(f\"totalCount: {issues.totalCount}\")  # Prints 0 instead of 1\n   ```\n\n## Evidence\n\n**HTTP Response** (captured with debugging):\n```json\n{\n  \"total_count\": 1,\n  \"incomplete_results\": false,\n  \"items\": [{\"number\": 12345, \"title\": \"Example PR\", ...}]\n}\n```\n\n**Response Headers**:\n```\nLink: <https://github.blog/changelog/2025-03-06-github-issues-projects-api-support-for-issues-advanced-search-and-more/>; rel=\"deprecation\"; type=\"text/html\"\n```\n\n**Parsed Links**: `{\"deprecation\": \"https://github.blog/changelog/...\"}`\n**Result**: No \"last\" link found → `totalCount = 0`\n\n## Proposed Fix\n\nChange line 152 in `PaginatedList.py` from:\n```python\nif \"link\" not in headers:\n```\n\nTo:\n```python\nif \"link\" not in headers or not self.__hasPaginationLinks(headers):\n```\n\nWhere `__hasPaginationLinks()` checks for pagination-specific `rel` values (`\"next\"`, `\"prev\"`, `\"last\"`, `\"first\"`), ignoring other Link types like deprecation notices.\n\nAlternative implementation:\n```python\ndef __hasPaginationLinks(self, headers):\n    \"\"\"Check if Link header contains pagination links, not just deprecation notices\"\"\"\n    if \"link\" not in headers:\n        return False\n\n    links = self.__parseLinkHeader(headers)\n    pagination_rels = {\"next\", \"prev\", \"last\", \"first\"}\n    return any(rel in pagination_rels for rel in links.keys())\n```\n\n## Impact\n\nThis bug affects:\n- All search operations (`search_issues`, `search_repositories`, `search_users`, etc.)\n- Any application relying on search result counts\n- Pagination logic when GitHub includes deprecation notices\n\n**Additional Context**: This issue started appearing around early September 2025 when GitHub began including deprecation notices in API responses, breaking existing PyGithub installations that were working fine before.\n","closed_by":null,"reactions":{"url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3379/reactions","total_count":0,"+1":0,"-1":0,"laugh":0,"hooray":0,"confused":0,"heart":0,"rocket":0,"eyes":0},"timeline_url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3379/timeline","performed_via_github_app":null,"state_reason":null},{"url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3373","repository_url":"https://api.github.com/repos/PyGithub/PyGithub","labels_url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3373/labels{/name}","comments_url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3373/comments","events_url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3373/events","html_url":"https://github.com/PyGithub/PyGithub/issues/3373","id":3399666591,"node_id":"I_kwDOADYVqs7Kosuf","number":3373,"title":"Broken links in documentation in 2.8","user":{"login":"skinitimski","id":418155,"node_id":"MDQ6VXNlcjQxODE1NQ==","avatar_url":"https://avatars.githubusercontent.com/u/418155?v=4","gravatar_id":"","url":"https://api.github.com/users/skinitimski","html_url":"https://github.com/skinitimski","followers_url":"https://api.github.com/users/skinitimski/followers","following_url":"https://api.github.com/users/skinitimski/following{/other_user}","gists_url":"https://api.github.com/users/skinitimski/gists{/gist_id}","starred_url":"https://api.github.com/users/skinitimski/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/skinitimski/subscriptions","organizations_url":"https://api.github.com/users/skinitimski/orgs","repos_url":"https://api.github.com/users/skinitimski/repos","events_url":"https://api.github.com/users/skinitimski/events{/privacy}","received_events_url":"https://api.github.com/users/skinitimski/received_events","type":"User","user_view_type":"public","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":2,"created_at":"2025-09-09T19:25:13Z","updated_at":"2025-09-09T20:29:51Z","closed_at":null,"author_association":"CONTRIBUTOR","type":{"id":1386163,"node_id":"IT_kwDOAKxBpM4AFSaz","name":"Bug","description":"An unexpected problem or behavior","color":"red","created_at":"2024-01-25T12:55:41Z","updated_at":"2024-07-26T10:24:51Z","is_enabled":true},"active_lock_reason":null,"sub_issues_summary":{"total":0,"completed":0,"percent_completed":0},"issue_dependencies_summary":{"blocked_by":0,"total_blocked_by":0,"blocking":0,"total_blocking":0},"body":"docs for 2.7.0 <https://pygithub.readthedocs.io/en/v2.7.0/apis.html>\ndocs for 2.8.0 <https://pygithub.readthedocs.io/en/v2.8.0/apis.html>\n\ngrep \"github.Repository.Repository.get_pulls()\"\n\nIn the 2.7.0 page, the grepped text links to the docs for the Repository object.\n\nIn the 2.8.0 page, there is no link.\n\nSimilarly, the [2.7.0 docs](https://pygithub.readthedocs.io/en/v2.7.0/github_objects/Repository.html#github.Repository.Repository.allow_auto_merge) have a lot to say about the members of Repository, but the [2.8.0 docs](https://pygithub.readthedocs.io/en/v2.8.0/github_objects/Repository.html) show no members at all.","closed_by":null,"reactions":{"url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3373/reactions","total_count":0,"+1":0,"-1":0,"laugh":0,"hooray":0,"confused":0,"heart":0,"rocket":0,"eyes":0},"timeline_url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3373/timeline","performed_via_github_app":null,"state_reason":null},{"url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3372","repository_url":"https://api.github.com/repos/PyGithub/PyGithub","labels_url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3372/labels{/name}","comments_url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3372/comments","events_url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3372/events","html_url":"https://github.com/PyGithub/PyGithub/issues/3372","id":3398817538,"node_id":"I_kwDOADYVqs7KldcC","number":3372,"title":"Commit.files does not respect requester.per_page (in forward mode)","user":{"login":"iarspider","id":636602,"node_id":"MDQ6VXNlcjYzNjYwMg==","avatar_url":"https://avatars.githubusercontent.com/u/636602?v=4","gravatar_id":"","url":"https://api.github.com/users/iarspider","html_url":"https://github.com/iarspider","followers_url":"https://api.github.com/users/iarspider/followers","following_url":"https://api.github.com/users/iarspider/following{/other_user}","gists_url":"https://api.github.com/users/iarspider/gists{/gist_id}","starred_url":"https://api.github.com/users/iarspider/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/iarspider/subscriptions","organizations_url":"https://api.github.com/users/iarspider/orgs","repos_url":"https://api.github.com/users/iarspider/repos","events_url":"https://api.github.com/users/iarspider/events{/privacy}","received_events_url":"https://api.github.com/users/iarspider/received_events","type":"User","user_view_type":"public","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":4,"created_at":"2025-09-09T14:51:27Z","updated_at":"2025-09-17T19:49:40Z","closed_at":null,"author_association":"CONTRIBUTOR","type":{"id":1386163,"node_id":"IT_kwDOAKxBpM4AFSaz","name":"Bug","description":"An unexpected problem or behavior","color":"red","created_at":"2024-01-25T12:55:41Z","updated_at":"2024-07-26T10:24:51Z","is_enabled":true},"active_lock_reason":null,"sub_issues_summary":{"total":0,"completed":0,"percent_completed":0},"issue_dependencies_summary":{"blocked_by":0,"total_blocked_by":0,"blocking":0,"total_blocking":0},"body":"Minimal example:\n\n```\nimport logging\nfrom github import Github, Auth\ngh = Github(auth=Auth.Token($token), per_page=100)\ngh.requester._logger.setLevel(logging.DEBUG)\nrepo = gh.get_repo(\"iarspider-cmssw/cmssw\")\nissue = repo.get_issue(38)\npr = repo.get_pull(38)\ncommits = pr.get_commits()\ncommit = commits[0]\nfiles = list(commit.files)\nprint(len(files))\nfiles = list(reversed(commit.files))\nprint(len(files))\n```\n\nRunning this script and filtering the output with `grep '^GET' | awk '{print $1,$2}'`, I get this output:\n\n```\nGET https://api.github.com/repos/iarspider-cmssw/cmssw/pulls/38/commits?per_page=100\nGET https://api.github.com/repos/iarspider-cmssw/cmssw/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?page=2\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?page=3\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?page=4\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?page=5\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?page=6\nGET https://api.github.com/repos/iarspider-cmssw/cmssw/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=16\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=15\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=14\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=13\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=12\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=11\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=10\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=9\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=8\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=7\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=6\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=5\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=4\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=3\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=2\nGET https://api.github.com/repositories/399376380/commits/b6db3e643d2bd16deee12590d1312a3addcd2d75?per_page=100&page=1\n```\n\nNotice that forward iteration ignores per_page, but reverse respects it.\n\nThe [endpoint](https://docs.github.com/en/rest/commits/commits?apiVersion=2022-11-28#get-a-commit) supports `per_page` parameter. ","closed_by":null,"reactions":{"url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3372/reactions","total_count":0,"+1":0,"-1":0,"laugh":0,"hooray":0,"confused":0,"heart":0,"rocket":0,"eyes":0},"timeline_url":"https://api.github.com/repos/PyGithub/PyGithub/issues/3372/timeline","performed_via_github_app":null,"state_reason":null}]

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