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  <compounddef id="structvrna__mx__pf__s" kind="struct" language="C++" prot="public">
    <compoundname>vrna_mx_pf_s</compoundname>
    <includes refid="datastructures_2dp__matrices_8h" local="no">ViennaRNA/datastructures/dp_matrices.h</includes>
    <sectiondef kind="user-defined">
      <header>Common fields for DP matrices</header>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1af3ef433500adebc8ca0a35b5e2bfccfa" prot="public" static="no" mutable="no">
        <type>const <ref refid="group__dp__matrices_1ga6042ea1d58d01931e959791be6d89343" kindref="member">vrna_mx_type_e</ref></type>
        <definition>const vrna_mx_type_e vrna_mx_pf_s::type</definition>
        <argsstring></argsstring>
        <name>type</name>
        <qualifiedname>vrna_mx_pf_s::type</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
<para>Type of the DP matrices </para>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="231" column="25" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="231" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a798f72ece3f3f970bb0de2120600ad63" prot="public" static="no" mutable="no">
        <type>unsigned int</type>
        <definition>unsigned int vrna_mx_pf_s::length</definition>
        <argsstring></argsstring>
        <name>length</name>
        <qualifiedname>vrna_mx_pf_s::length</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
<para>Size of the DP matrices (i.e. sequence length) </para>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="232" column="25" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="232" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a133ac57938cb0969da254a594572baf8" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::scale</definition>
        <argsstring></argsstring>
        <name>scale</name>
        <qualifiedname>vrna_mx_pf_s::scale</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
<para>Boltzmann factor scaling </para>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="233" column="25" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="233" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1ae18e83833416f62943d5dd7be1cc038f" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::expMLbase</definition>
        <argsstring></argsstring>
        <name>expMLbase</name>
        <qualifiedname>vrna_mx_pf_s::expMLbase</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
<para>Boltzmann factors for unpaired bases in multibranch loop </para>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="234" column="25" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="234" bodyend="-1"/>
      </memberdef>
    </sectiondef>
    <sectiondef kind="user-defined">
      <header>Default PF matrices</header>
      <description><para><simplesect kind="note"><para>These data fields are available if <programlisting><codeline><highlight class="normal"><ref refid="group__dp__matrices_1ga68729ab3fed26bdd1806fa814f172fc1" kindref="member">vrna_mx_pf_t</ref>.<ref refid="structvrna__mx__pf__s_1af3ef433500adebc8ca0a35b5e2bfccfa" kindref="member">type</ref><sp/>==<sp/><ref refid="group__dp__matrices_1gga6042ea1d58d01931e959791be6d89343aafa2568956dab79595521e20c49a5f75" kindref="member">VRNA_MX_DEFAULT</ref><sp/></highlight></codeline>
</programlisting> </para>
</simplesect>
</para>
</description>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a033a0277ac33736256c6a13f13d75879" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::q</definition>
        <argsstring></argsstring>
        <name>q</name>
        <qualifiedname>vrna_mx_pf_s::q</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="251" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="251" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1abd5ea8aa63458625d0c8b2a868fcfa28" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::qb</definition>
        <argsstring></argsstring>
        <name>qb</name>
        <qualifiedname>vrna_mx_pf_s::qb</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="252" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="252" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a612e774309a7fd0b6812200aa31f87d5" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::qm</definition>
        <argsstring></argsstring>
        <name>qm</name>
        <qualifiedname>vrna_mx_pf_s::qm</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="253" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="253" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1ad60e1fd6fa490ae72cdd899c37a52165" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::qm1</definition>
        <argsstring></argsstring>
        <name>qm1</name>
        <qualifiedname>vrna_mx_pf_s::qm1</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="254" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="254" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1aee4b900811aa012ab135838e2e5868f2" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::probs</definition>
        <argsstring></argsstring>
        <name>probs</name>
        <qualifiedname>vrna_mx_pf_s::probs</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="255" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="255" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a6ee76a2c5cefd1a9d6addf0a32071124" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::q1k</definition>
        <argsstring></argsstring>
        <name>q1k</name>
        <qualifiedname>vrna_mx_pf_s::q1k</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="256" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="256" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1ae3a10b81e574b966d062e705b4ad8168" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::qln</definition>
        <argsstring></argsstring>
        <name>qln</name>
        <qualifiedname>vrna_mx_pf_s::qln</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="257" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="257" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a160e39f74bfcd3f94c77bdf334070782" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref></type>
        <definition>FLT_OR_DBL vrna_mx_pf_s::qo</definition>
        <argsstring></argsstring>
        <name>qo</name>
        <qualifiedname>vrna_mx_pf_s::qo</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="261" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="261" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a0a4ff1fd1b71810ccab242a862cfdf8c" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::qm2</definition>
        <argsstring></argsstring>
        <name>qm2</name>
        <qualifiedname>vrna_mx_pf_s::qm2</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="262" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="262" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a68bde9cc2d4218b7b4fc3c267fd3fece" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::qm2_real</definition>
        <argsstring></argsstring>
        <name>qm2_real</name>
        <qualifiedname>vrna_mx_pf_s::qm2_real</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="263" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="263" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a375088c4077fc23fe3b8f844d8f71416" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::qm1_new</definition>
        <argsstring></argsstring>
        <name>qm1_new</name>
        <qualifiedname>vrna_mx_pf_s::qm1_new</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="264" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="264" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a0841b18e38c22bb92df7efee9caaabb0" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref></type>
        <definition>FLT_OR_DBL vrna_mx_pf_s::qho</definition>
        <argsstring></argsstring>
        <name>qho</name>
        <qualifiedname>vrna_mx_pf_s::qho</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="265" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="265" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1ac9c23d0dd3a0bb150c389399afe119eb" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref></type>
        <definition>FLT_OR_DBL vrna_mx_pf_s::qio</definition>
        <argsstring></argsstring>
        <name>qio</name>
        <qualifiedname>vrna_mx_pf_s::qio</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="266" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="266" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a970e8f6dfdf874185a9d4f77a942f61c" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref></type>
        <definition>FLT_OR_DBL vrna_mx_pf_s::qmo</definition>
        <argsstring></argsstring>
        <name>qmo</name>
        <qualifiedname>vrna_mx_pf_s::qmo</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="267" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="267" bodyend="-1"/>
      </memberdef>
    </sectiondef>
    <sectiondef kind="user-defined">
      <header>Local Folding DP matrices using window approach</header>
      <description><para><simplesect kind="note"><para>These data fields are available if <programlisting><codeline><highlight class="normal"><ref refid="group__dp__matrices_1gae5aef35d016475e758f619b7bcb534f9" kindref="member">vrna_mx_mfe_t</ref>.<ref refid="structvrna__mx__mfe__s_1a9292754662fd36235ee949c6849932f5" kindref="member">type</ref><sp/>==<sp/><ref refid="group__dp__matrices_1gga6042ea1d58d01931e959791be6d89343a2ea5d5947f6ec02544934b0ff2785e99" kindref="member">VRNA_MX_WINDOW</ref><sp/></highlight></codeline>
</programlisting> </para>
</simplesect>
</para>
</description>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a742126d3bbd599a459660e78ea150564" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> **</type>
        <definition>FLT_OR_DBL** vrna_mx_pf_s::q_local</definition>
        <argsstring></argsstring>
        <name>q_local</name>
        <qualifiedname>vrna_mx_pf_s::q_local</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="284" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="284" bodyend="-1"/>
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      <memberdef kind="variable" id="structvrna__mx__pf__s_1a8676136222e69b430a7a4fcbbf27c65c" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> **</type>
        <definition>FLT_OR_DBL** vrna_mx_pf_s::qb_local</definition>
        <argsstring></argsstring>
        <name>qb_local</name>
        <qualifiedname>vrna_mx_pf_s::qb_local</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="285" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="285" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1adc05b79fd8df7a618a7dfdc852c9703d" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> **</type>
        <definition>FLT_OR_DBL** vrna_mx_pf_s::qm_local</definition>
        <argsstring></argsstring>
        <name>qm_local</name>
        <qualifiedname>vrna_mx_pf_s::qm_local</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="286" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="286" bodyend="-1"/>
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      <memberdef kind="variable" id="structvrna__mx__pf__s_1a401780fdba30145d0e3af22c36b432d6" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> **</type>
        <definition>FLT_OR_DBL** vrna_mx_pf_s::pR</definition>
        <argsstring></argsstring>
        <name>pR</name>
        <qualifiedname>vrna_mx_pf_s::pR</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="287" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="287" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a24af2da1539a28f43f1c557f7d7ec1bf" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> **</type>
        <definition>FLT_OR_DBL** vrna_mx_pf_s::qm2_local</definition>
        <argsstring></argsstring>
        <name>qm2_local</name>
        <qualifiedname>vrna_mx_pf_s::qm2_local</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="288" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="288" bodyend="-1"/>
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      <memberdef kind="variable" id="structvrna__mx__pf__s_1a1398df7d88fef9aac386d24ee4cb9d17" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> **</type>
        <definition>FLT_OR_DBL** vrna_mx_pf_s::QI5</definition>
        <argsstring></argsstring>
        <name>QI5</name>
        <qualifiedname>vrna_mx_pf_s::QI5</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="289" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="289" bodyend="-1"/>
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      <memberdef kind="variable" id="structvrna__mx__pf__s_1ab0cbf800f6a85a2d3f8a45ffcd08d7a8" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> **</type>
        <definition>FLT_OR_DBL** vrna_mx_pf_s::q2l</definition>
        <argsstring></argsstring>
        <name>q2l</name>
        <qualifiedname>vrna_mx_pf_s::q2l</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
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        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> **</type>
        <definition>FLT_OR_DBL** vrna_mx_pf_s::qmb</definition>
        <argsstring></argsstring>
        <name>qmb</name>
        <qualifiedname>vrna_mx_pf_s::qmb</qualifiedname>
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      <header>Distance Class DP matrices</header>
      <description><para><simplesect kind="note"><para>These data fields are available if <programlisting><codeline><highlight class="normal"><ref refid="group__dp__matrices_1ga68729ab3fed26bdd1806fa814f172fc1" kindref="member">vrna_mx_pf_t</ref>.<ref refid="structvrna__mx__pf__s_1af3ef433500adebc8ca0a35b5e2bfccfa" kindref="member">type</ref><sp/>==<sp/><ref refid="group__dp__matrices_1gga6042ea1d58d01931e959791be6d89343ae656f8391445ff71bed8a597a0a19417" kindref="member">VRNA_MX_2DFOLD</ref><sp/></highlight></codeline>
</programlisting> </para>
</simplesect>
</para>
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        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> ***</type>
        <definition>FLT_OR_DBL*** vrna_mx_pf_s::Q</definition>
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        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> ***</type>
        <definition>FLT_OR_DBL*** vrna_mx_pf_s::Q_B</definition>
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        <definition>int* vrna_mx_pf_s::k_min_Q_B</definition>
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        <definition>int* vrna_mx_pf_s::k_max_Q_B</definition>
        <argsstring></argsstring>
        <name>k_max_Q_B</name>
        <qualifiedname>vrna_mx_pf_s::k_max_Q_B</qualifiedname>
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        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> ***</type>
        <definition>FLT_OR_DBL*** vrna_mx_pf_s::Q_M</definition>
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        <argsstring></argsstring>
        <name>l_min_Q_M</name>
        <qualifiedname>vrna_mx_pf_s::l_min_Q_M</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="322" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="322" bodyend="-1"/>
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      <memberdef kind="variable" id="structvrna__mx__pf__s_1a0e46adc65e479d671aed00097b8f162a" prot="public" static="no" mutable="no">
        <type>int **</type>
        <definition>int** vrna_mx_pf_s::l_max_Q_M</definition>
        <argsstring></argsstring>
        <name>l_max_Q_M</name>
        <qualifiedname>vrna_mx_pf_s::l_max_Q_M</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="323" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="323" bodyend="-1"/>
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      <memberdef kind="variable" id="structvrna__mx__pf__s_1ab3375971ac859512a745d6eec99244d2" prot="public" static="no" mutable="no">
        <type>int *</type>
        <definition>int* vrna_mx_pf_s::k_min_Q_M</definition>
        <argsstring></argsstring>
        <name>k_min_Q_M</name>
        <qualifiedname>vrna_mx_pf_s::k_min_Q_M</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="324" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="324" bodyend="-1"/>
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      <memberdef kind="variable" id="structvrna__mx__pf__s_1a9b9d2a9a7a25929605437af8fe3e7f47" prot="public" static="no" mutable="no">
        <type>int *</type>
        <definition>int* vrna_mx_pf_s::k_max_Q_M</definition>
        <argsstring></argsstring>
        <name>k_max_Q_M</name>
        <qualifiedname>vrna_mx_pf_s::k_max_Q_M</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
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        <location file="ViennaRNA/datastructures/dp_matrices.h" line="325" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="325" bodyend="-1"/>
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        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> ***</type>
        <definition>FLT_OR_DBL*** vrna_mx_pf_s::Q_M1</definition>
        <argsstring></argsstring>
        <name>Q_M1</name>
        <qualifiedname>vrna_mx_pf_s::Q_M1</qualifiedname>
        <briefdescription>
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        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
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        <location file="ViennaRNA/datastructures/dp_matrices.h" line="327" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="327" bodyend="-1"/>
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        <argsstring></argsstring>
        <name>l_min_Q_M1</name>
        <qualifiedname>vrna_mx_pf_s::l_min_Q_M1</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
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        <location file="ViennaRNA/datastructures/dp_matrices.h" line="328" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="328" bodyend="-1"/>
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        <argsstring></argsstring>
        <name>l_max_Q_M1</name>
        <qualifiedname>vrna_mx_pf_s::l_max_Q_M1</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
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        <inbodydescription>
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        <location file="ViennaRNA/datastructures/dp_matrices.h" line="329" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="329" bodyend="-1"/>
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        <argsstring></argsstring>
        <name>k_min_Q_M1</name>
        <qualifiedname>vrna_mx_pf_s::k_min_Q_M1</qualifiedname>
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        <detaileddescription>
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        <inbodydescription>
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        <argsstring></argsstring>
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        <qualifiedname>vrna_mx_pf_s::k_max_Q_M1</qualifiedname>
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        <location file="ViennaRNA/datastructures/dp_matrices.h" line="331" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="331" bodyend="-1"/>
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        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> ***</type>
        <definition>FLT_OR_DBL*** vrna_mx_pf_s::Q_M2</definition>
        <argsstring></argsstring>
        <name>Q_M2</name>
        <qualifiedname>vrna_mx_pf_s::Q_M2</qualifiedname>
        <briefdescription>
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        <inbodydescription>
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      <memberdef kind="variable" id="structvrna__mx__pf__s_1ad23a0e61af82fdf8243c10000d418a8f" prot="public" static="no" mutable="no">
        <type>int **</type>
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        <argsstring></argsstring>
        <name>l_min_Q_M2</name>
        <qualifiedname>vrna_mx_pf_s::l_min_Q_M2</qualifiedname>
        <briefdescription>
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        <detaileddescription>
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        <inbodydescription>
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        <location file="ViennaRNA/datastructures/dp_matrices.h" line="334" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="334" bodyend="-1"/>
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        <argsstring></argsstring>
        <name>l_max_Q_M2</name>
        <qualifiedname>vrna_mx_pf_s::l_max_Q_M2</qualifiedname>
        <briefdescription>
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        <argsstring></argsstring>
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        <qualifiedname>vrna_mx_pf_s::k_min_Q_M2</qualifiedname>
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        <location file="ViennaRNA/datastructures/dp_matrices.h" line="340" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="340" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1ad16c8bacc50d9ad75fc4d3aad18b3c74" prot="public" static="no" mutable="no">
        <type>int *</type>
        <definition>int* vrna_mx_pf_s::l_max_Q_c</definition>
        <argsstring></argsstring>
        <name>l_max_Q_c</name>
        <qualifiedname>vrna_mx_pf_s::l_max_Q_c</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="341" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="341" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1aca9ff00550c75057c3f0796526eaa3fd" prot="public" static="no" mutable="no">
        <type>int</type>
        <definition>int vrna_mx_pf_s::k_min_Q_c</definition>
        <argsstring></argsstring>
        <name>k_min_Q_c</name>
        <qualifiedname>vrna_mx_pf_s::k_min_Q_c</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="342" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="342" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1ac5cdf53876b9ea8060b7c0fc12b2bdca" prot="public" static="no" mutable="no">
        <type>int</type>
        <definition>int vrna_mx_pf_s::k_max_Q_c</definition>
        <argsstring></argsstring>
        <name>k_max_Q_c</name>
        <qualifiedname>vrna_mx_pf_s::k_max_Q_c</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="343" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="343" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1aba4db9bf16cbe37199838b8ed1ba096c" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> **</type>
        <definition>FLT_OR_DBL** vrna_mx_pf_s::Q_cH</definition>
        <argsstring></argsstring>
        <name>Q_cH</name>
        <qualifiedname>vrna_mx_pf_s::Q_cH</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="345" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="345" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a08f5bfd11886731ebb3a9f0ba97a0b6b" prot="public" static="no" mutable="no">
        <type>int *</type>
        <definition>int* vrna_mx_pf_s::l_min_Q_cH</definition>
        <argsstring></argsstring>
        <name>l_min_Q_cH</name>
        <qualifiedname>vrna_mx_pf_s::l_min_Q_cH</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="346" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="346" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a1ac1d79977932e1b7131b47948b3915a" prot="public" static="no" mutable="no">
        <type>int *</type>
        <definition>int* vrna_mx_pf_s::l_max_Q_cH</definition>
        <argsstring></argsstring>
        <name>l_max_Q_cH</name>
        <qualifiedname>vrna_mx_pf_s::l_max_Q_cH</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="347" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="347" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a763eab70c62986a630fd0013d1931ea8" prot="public" static="no" mutable="no">
        <type>int</type>
        <definition>int vrna_mx_pf_s::k_min_Q_cH</definition>
        <argsstring></argsstring>
        <name>k_min_Q_cH</name>
        <qualifiedname>vrna_mx_pf_s::k_min_Q_cH</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="348" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="348" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a8093a0a48f24c26e575b18e5d59b1e5c" prot="public" static="no" mutable="no">
        <type>int</type>
        <definition>int vrna_mx_pf_s::k_max_Q_cH</definition>
        <argsstring></argsstring>
        <name>k_max_Q_cH</name>
        <qualifiedname>vrna_mx_pf_s::k_max_Q_cH</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="349" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="349" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a1db737927aabceddad13832191c5fa27" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> **</type>
        <definition>FLT_OR_DBL** vrna_mx_pf_s::Q_cI</definition>
        <argsstring></argsstring>
        <name>Q_cI</name>
        <qualifiedname>vrna_mx_pf_s::Q_cI</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="351" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="351" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a9e0b38f8272badd75df592524e383973" prot="public" static="no" mutable="no">
        <type>int *</type>
        <definition>int* vrna_mx_pf_s::l_min_Q_cI</definition>
        <argsstring></argsstring>
        <name>l_min_Q_cI</name>
        <qualifiedname>vrna_mx_pf_s::l_min_Q_cI</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="352" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="352" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a852c2d9450a188cc49d72150f7647e48" prot="public" static="no" mutable="no">
        <type>int *</type>
        <definition>int* vrna_mx_pf_s::l_max_Q_cI</definition>
        <argsstring></argsstring>
        <name>l_max_Q_cI</name>
        <qualifiedname>vrna_mx_pf_s::l_max_Q_cI</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="353" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="353" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1addf9d5e7d009a936651fa1b98421e2bd" prot="public" static="no" mutable="no">
        <type>int</type>
        <definition>int vrna_mx_pf_s::k_min_Q_cI</definition>
        <argsstring></argsstring>
        <name>k_min_Q_cI</name>
        <qualifiedname>vrna_mx_pf_s::k_min_Q_cI</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="354" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="354" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1abc3dd1b2bf0f90647e8c73c93432b154" prot="public" static="no" mutable="no">
        <type>int</type>
        <definition>int vrna_mx_pf_s::k_max_Q_cI</definition>
        <argsstring></argsstring>
        <name>k_max_Q_cI</name>
        <qualifiedname>vrna_mx_pf_s::k_max_Q_cI</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="355" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="355" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1ae8e6bc3de40ebe54c7c36677cdc38df8" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> **</type>
        <definition>FLT_OR_DBL** vrna_mx_pf_s::Q_cM</definition>
        <argsstring></argsstring>
        <name>Q_cM</name>
        <qualifiedname>vrna_mx_pf_s::Q_cM</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="357" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="357" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1aef4bfb509acba7441d9ace1e0a7e4b93" prot="public" static="no" mutable="no">
        <type>int *</type>
        <definition>int* vrna_mx_pf_s::l_min_Q_cM</definition>
        <argsstring></argsstring>
        <name>l_min_Q_cM</name>
        <qualifiedname>vrna_mx_pf_s::l_min_Q_cM</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="358" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="358" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a57c50e60f1679e2d1add5b48d67b4ad4" prot="public" static="no" mutable="no">
        <type>int *</type>
        <definition>int* vrna_mx_pf_s::l_max_Q_cM</definition>
        <argsstring></argsstring>
        <name>l_max_Q_cM</name>
        <qualifiedname>vrna_mx_pf_s::l_max_Q_cM</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="359" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="359" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1ab014ff37700866fd2be6139b3ec470c6" prot="public" static="no" mutable="no">
        <type>int</type>
        <definition>int vrna_mx_pf_s::k_min_Q_cM</definition>
        <argsstring></argsstring>
        <name>k_min_Q_cM</name>
        <qualifiedname>vrna_mx_pf_s::k_min_Q_cM</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="360" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="360" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a10c73fd5be9a9bbd350f929d758ac8cf" prot="public" static="no" mutable="no">
        <type>int</type>
        <definition>int vrna_mx_pf_s::k_max_Q_cM</definition>
        <argsstring></argsstring>
        <name>k_max_Q_cM</name>
        <qualifiedname>vrna_mx_pf_s::k_max_Q_cM</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="361" column="7" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="361" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a9d0f5ad230b36b3553ddf7585c1ae2ec" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::Q_rem</definition>
        <argsstring></argsstring>
        <name>Q_rem</name>
        <qualifiedname>vrna_mx_pf_s::Q_rem</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="364" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="364" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a3e398f1778086b00deb05a3990d533ab" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::Q_B_rem</definition>
        <argsstring></argsstring>
        <name>Q_B_rem</name>
        <qualifiedname>vrna_mx_pf_s::Q_B_rem</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="365" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="365" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a07d9c31f3205d96e094104971b8a85a6" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::Q_M_rem</definition>
        <argsstring></argsstring>
        <name>Q_M_rem</name>
        <qualifiedname>vrna_mx_pf_s::Q_M_rem</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="366" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="366" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a7d77708c602e982af5a6c1f340d329f4" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::Q_M1_rem</definition>
        <argsstring></argsstring>
        <name>Q_M1_rem</name>
        <qualifiedname>vrna_mx_pf_s::Q_M1_rem</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="367" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="367" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a6480ac40d5405af825dee74e3518d6ae" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref> *</type>
        <definition>FLT_OR_DBL* vrna_mx_pf_s::Q_M2_rem</definition>
        <argsstring></argsstring>
        <name>Q_M2_rem</name>
        <qualifiedname>vrna_mx_pf_s::Q_M2_rem</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="368" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="368" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a0ce7f4b73a6df939f79dfd2f21de80b8" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref></type>
        <definition>FLT_OR_DBL vrna_mx_pf_s::Q_c_rem</definition>
        <argsstring></argsstring>
        <name>Q_c_rem</name>
        <qualifiedname>vrna_mx_pf_s::Q_c_rem</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="370" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="370" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1aff841b24d39a4f162ba1d10e5109cbe3" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref></type>
        <definition>FLT_OR_DBL vrna_mx_pf_s::Q_cH_rem</definition>
        <argsstring></argsstring>
        <name>Q_cH_rem</name>
        <qualifiedname>vrna_mx_pf_s::Q_cH_rem</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="371" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="371" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a844916b65f091b27e89547f7a51a2dea" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref></type>
        <definition>FLT_OR_DBL vrna_mx_pf_s::Q_cI_rem</definition>
        <argsstring></argsstring>
        <name>Q_cI_rem</name>
        <qualifiedname>vrna_mx_pf_s::Q_cI_rem</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="372" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="372" bodyend="-1"/>
      </memberdef>
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a6f6bad095f31114e990d68af46d2eda5" prot="public" static="no" mutable="no">
        <type><ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref></type>
        <definition>FLT_OR_DBL vrna_mx_pf_s::Q_cM_rem</definition>
        <argsstring></argsstring>
        <name>Q_cM_rem</name>
        <qualifiedname>vrna_mx_pf_s::Q_cM_rem</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="373" column="14" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="373" bodyend="-1"/>
      </memberdef>
    </sectiondef>
    <sectiondef kind="public-attrib">
      <memberdef kind="variable" id="structvrna__mx__pf__s_1a55be60cf7cae35277851058d2d4279c3" prot="public" static="no" mutable="no">
        <type>union <ref refid="structvrna__mx__pf__s" kindref="compound">vrna_mx_pf_s</ref></type>
        <definition>union vrna_mx_pf_s vrna_mx_pf_s</definition>
        <argsstring></argsstring>
        <name></name>
        <qualifiedname>vrna_mx_pf_s</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/dp_matrices.h" line="381" column="1"/>
      </memberdef>
    </sectiondef>
    <briefdescription>
<para>Partition function (PF) Dynamic Programming (DP) matrices data structure required within the <ref refid="group__fold__compound_1ga1b0cef17fd40466cef5968eaeeff6166" kindref="member">vrna_fold_compound_t</ref>. </para>
    </briefdescription>
    <detaileddescription>
    </detaileddescription>
    <location file="ViennaRNA/datastructures/dp_matrices.h" line="227" column="1" bodyfile="ViennaRNA/datastructures/dp_matrices.h" bodystart="227" bodyend="383"/>
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