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        <type>int</type>
        <definition>int vrna_param_s::id</definition>
        <argsstring></argsstring>
        <name>id</name>
        <qualifiedname>vrna_param_s::id</qualifiedname>
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        <definition>int vrna_param_s::stack[NBPAIRS+1][NBPAIRS+1]</definition>
        <argsstring>[NBPAIRS+1][NBPAIRS+1]</argsstring>
        <name>stack</name>
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        <definition>int vrna_param_s::hairpin[31]</definition>
        <argsstring>[31]</argsstring>
        <name>hairpin</name>
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        <briefdescription>
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        <argsstring>[MAXLOOP+1]</argsstring>
        <name>bulge</name>
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        <briefdescription>
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        <argsstring>[MAXLOOP+1]</argsstring>
        <name>internal_loop</name>
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        <argsstring>[NBPAIRS+1][5][5]</argsstring>
        <name>mismatchExt</name>
        <qualifiedname>vrna_param_s::mismatchExt</qualifiedname>
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        <argsstring>[NBPAIRS+1][5][5]</argsstring>
        <name>mismatchI</name>
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        <argsstring>[NBPAIRS+1][5][5]</argsstring>
        <name>mismatch1nI</name>
        <qualifiedname>vrna_param_s::mismatch1nI</qualifiedname>
        <briefdescription>
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        <argsstring>[NBPAIRS+1][5][5]</argsstring>
        <name>mismatch23I</name>
        <qualifiedname>vrna_param_s::mismatch23I</qualifiedname>
        <briefdescription>
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        <definition>int vrna_param_s::mismatchH[NBPAIRS+1][5][5]</definition>
        <argsstring>[NBPAIRS+1][5][5]</argsstring>
        <name>mismatchH</name>
        <qualifiedname>vrna_param_s::mismatchH</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
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        <definition>int vrna_param_s::mismatchM[NBPAIRS+1][5][5]</definition>
        <argsstring>[NBPAIRS+1][5][5]</argsstring>
        <name>mismatchM</name>
        <qualifiedname>vrna_param_s::mismatchM</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
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        <type>int</type>
        <definition>int vrna_param_s::dangle5[NBPAIRS+1][5]</definition>
        <argsstring>[NBPAIRS+1][5]</argsstring>
        <name>dangle5</name>
        <qualifiedname>vrna_param_s::dangle5</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
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        <definition>int vrna_param_s::dangle3[NBPAIRS+1][5]</definition>
        <argsstring>[NBPAIRS+1][5]</argsstring>
        <name>dangle3</name>
        <qualifiedname>vrna_param_s::dangle3</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
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        <definition>int vrna_param_s::int11[NBPAIRS+1][NBPAIRS+1][5][5]</definition>
        <argsstring>[NBPAIRS+1][NBPAIRS+1][5][5]</argsstring>
        <name>int11</name>
        <qualifiedname>vrna_param_s::int11</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
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        <inbodydescription>
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        <definition>int vrna_param_s::int21[NBPAIRS+1][NBPAIRS+1][5][5][5]</definition>
        <argsstring>[NBPAIRS+1][NBPAIRS+1][5][5][5]</argsstring>
        <name>int21</name>
        <qualifiedname>vrna_param_s::int21</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
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        <argsstring>[NBPAIRS+1][NBPAIRS+1][5][5][5][5]</argsstring>
        <name>int22</name>
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        </briefdescription>
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        <argsstring>[5]</argsstring>
        <name>ninio</name>
        <qualifiedname>vrna_param_s::ninio</qualifiedname>
        <briefdescription>
        </briefdescription>
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        <inbodydescription>
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        <argsstring></argsstring>
        <name>lxc</name>
        <qualifiedname>vrna_param_s::lxc</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
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        <inbodydescription>
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        <argsstring></argsstring>
        <name>MLbase</name>
        <qualifiedname>vrna_param_s::MLbase</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
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        <argsstring>[NBPAIRS+1]</argsstring>
        <name>MLintern</name>
        <qualifiedname>vrna_param_s::MLintern</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
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        <name>MLclosing</name>
        <qualifiedname>vrna_param_s::MLclosing</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
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        <name>TerminalAU</name>
        <qualifiedname>vrna_param_s::TerminalAU</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
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        <inbodydescription>
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        <name>DuplexInit</name>
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        <briefdescription>
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        <argsstring>[200]</argsstring>
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        <argsstring>[1401]</argsstring>
        <name>Tetraloops</name>
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        <briefdescription>
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        <name>Triloop_E</name>
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        <briefdescription>
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        <name>Triloops</name>
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        <argsstring>[40]</argsstring>
        <name>Hexaloop_E</name>
        <qualifiedname>vrna_param_s::Hexaloop_E</qualifiedname>
        <briefdescription>
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        <argsstring>[1801]</argsstring>
        <name>Hexaloops</name>
        <qualifiedname>vrna_param_s::Hexaloops</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
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        <inbodydescription>
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        <argsstring></argsstring>
        <name>TripleC</name>
        <qualifiedname>vrna_param_s::TripleC</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
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        <inbodydescription>
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        <definition>int vrna_param_s::MultipleCA</definition>
        <argsstring></argsstring>
        <name>MultipleCA</name>
        <qualifiedname>vrna_param_s::MultipleCA</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
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        <inbodydescription>
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        <type>int</type>
        <definition>int vrna_param_s::MultipleCB</definition>
        <argsstring></argsstring>
        <name>MultipleCB</name>
        <qualifiedname>vrna_param_s::MultipleCB</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
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        <inbodydescription>
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        <type>int</type>
        <definition>int vrna_param_s::gquad[VRNA_GQUAD_MAX_STACK_SIZE+1][3 *VRNA_GQUAD_MAX_LINKER_LENGTH+1]</definition>
        <argsstring>[VRNA_GQUAD_MAX_STACK_SIZE+1][3 *VRNA_GQUAD_MAX_LINKER_LENGTH+1]</argsstring>
        <name>gquad</name>
        <qualifiedname>vrna_param_s::gquad</qualifiedname>
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        <inbodydescription>
        </inbodydescription>
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        <type>int</type>
        <definition>int vrna_param_s::gquadLayerMismatch</definition>
        <argsstring></argsstring>
        <name>gquadLayerMismatch</name>
        <qualifiedname>vrna_param_s::gquadLayerMismatch</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
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        <type>unsigned int</type>
        <definition>unsigned int vrna_param_s::gquadLayerMismatchMax</definition>
        <argsstring></argsstring>
        <name>gquadLayerMismatchMax</name>
        <qualifiedname>vrna_param_s::gquadLayerMismatchMax</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
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        <type>double</type>
        <definition>double vrna_param_s::temperature</definition>
        <argsstring></argsstring>
        <name>temperature</name>
        <qualifiedname>vrna_param_s::temperature</qualifiedname>
        <briefdescription>
<para>Temperature used for loop contribution scaling. </para>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
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        <argsstring></argsstring>
        <name>model_details</name>
        <qualifiedname>vrna_param_s::model_details</qualifiedname>
        <briefdescription>
<para>Model details to be used in the recursions. </para>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
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        <type>char</type>
        <definition>char vrna_param_s::param_file[256]</definition>
        <argsstring>[256]</argsstring>
        <name>param_file</name>
        <qualifiedname>vrna_param_s::param_file</qualifiedname>
        <briefdescription>
<para>The filename the parameters were derived from, or empty string if they represent the default. </para>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
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        <definition>int vrna_param_s::SaltStack</definition>
        <argsstring></argsstring>
        <name>SaltStack</name>
        <qualifiedname>vrna_param_s::SaltStack</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
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        <type>int</type>
        <definition>int vrna_param_s::SaltLoop[MAXLOOP+2]</definition>
        <argsstring>[MAXLOOP+2]</argsstring>
        <name>SaltLoop</name>
        <qualifiedname>vrna_param_s::SaltLoop</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
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        <type>double</type>
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        <argsstring>[MAXLOOP+2]</argsstring>
        <name>SaltLoopDbl</name>
        <qualifiedname>vrna_param_s::SaltLoopDbl</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
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        <definition>int vrna_param_s::SaltMLbase</definition>
        <argsstring></argsstring>
        <name>SaltMLbase</name>
        <qualifiedname>vrna_param_s::SaltMLbase</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
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        <type>int</type>
        <definition>int vrna_param_s::SaltMLintern</definition>
        <argsstring></argsstring>
        <name>SaltMLintern</name>
        <qualifiedname>vrna_param_s::SaltMLintern</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
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        <type>int</type>
        <definition>int vrna_param_s::SaltMLclosing</definition>
        <argsstring></argsstring>
        <name>SaltMLclosing</name>
        <qualifiedname>vrna_param_s::SaltMLclosing</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/params/basic.h" line="95" column="17" bodyfile="ViennaRNA/params/basic.h" bodystart="95" bodyend="-1"/>
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        <argsstring></argsstring>
        <name>SaltDPXInit</name>
        <qualifiedname>vrna_param_s::SaltDPXInit</qualifiedname>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/params/basic.h" line="96" column="17" bodyfile="ViennaRNA/params/basic.h" bodystart="96" bodyend="-1"/>
      </memberdef>
    </sectiondef>
    <briefdescription>
<para>The datastructure that contains temperature scaled energy parameters. </para>
    </briefdescription>
    <detaileddescription>
    </detaileddescription>
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      <node id="2">
        <label>vrna_md_s</label>
        <link refid="structvrna__md__s"/>
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      <node id="1">
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        <link refid="structvrna__param__s"/>
        <childnode refid="2" relation="usage">
          <edgelabel>model_details</edgelabel>
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    </collaborationgraph>
    <location file="ViennaRNA/params/basic.h" line="49" column="1" bodyfile="ViennaRNA/params/basic.h" bodystart="49" bodyend="97"/>
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  </compounddef>
</doxygen>
