<?xml version='1.0' encoding='UTF-8' standalone='no'?>
<doxygen xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:noNamespaceSchemaLocation="compound.xsd" version="1.15.0" xml:lang="en-US">
  <compounddef id="sparse__mx_8h" kind="file" language="C++">
    <compoundname>sparse_mx.h</compoundname>
    <includes local="no">stdlib.h</includes>
    <includes refid="array_8h" local="no">ViennaRNA/datastructures/array.h</includes>
    <includedby refid="hard_8h" local="no">ViennaRNA/constraints/hard.h</includedby>
    <includedby refid="datastructures_2dp__matrices_8h" local="no">ViennaRNA/datastructures/dp_matrices.h</includedby>
    <includedby refid="eval_2gquad_8h" local="yes">ViennaRNA/eval/gquad.h</includedby>
    <includedby refid="mfe_2gquad_8h" local="yes">ViennaRNA/mfe/gquad.h</includedby>
    <includedby refid="partfunc_2gquad_8h" local="yes">ViennaRNA/partfunc/gquad.h</includedby>
    <incdepgraph>
      <node id="3">
        <label>ViennaRNA/datastructures/array.h</label>
        <link refid="array_8h"/>
        <childnode refid="4" relation="include">
        </childnode>
        <childnode refid="5" relation="include">
        </childnode>
      </node>
      <node id="1">
        <label>ViennaRNA/datastructures/sparse_mx.h</label>
        <link refid="sparse__mx_8h"/>
        <childnode refid="2" relation="include">
        </childnode>
        <childnode refid="3" relation="include">
        </childnode>
      </node>
      <node id="5">
        <label>ViennaRNA/utils/log.h</label>
        <link refid="log_8h"/>
        <childnode refid="6" relation="include">
        </childnode>
        <childnode refid="7" relation="include">
        </childnode>
        <childnode refid="8" relation="include">
        </childnode>
      </node>
      <node id="7">
        <label>stdarg.h</label>
      </node>
      <node id="4">
        <label>stddef.h</label>
      </node>
      <node id="6">
        <label>stdio.h</label>
      </node>
      <node id="2">
        <label>stdlib.h</label>
      </node>
      <node id="8">
        <label>time.h</label>
      </node>
    </incdepgraph>
    <invincdepgraph>
      <node id="6">
        <label>ViennaRNA/2Dfold.h</label>
        <link refid="2Dfold_8h"/>
      </node>
      <node id="7">
        <label>ViennaRNA/2Dpfold.h</label>
        <link refid="2Dpfold_8h"/>
      </node>
      <node id="8">
        <label>ViennaRNA/LPfold.h</label>
        <link refid="LPfold_8h"/>
      </node>
      <node id="68">
        <label>ViennaRNA/Lfold.h</label>
        <link refid="Lfold_8h"/>
      </node>
      <node id="85">
        <label>ViennaRNA/MEA.h</label>
        <link refid="MEA_8h"/>
      </node>
      <node id="9">
        <label>ViennaRNA/PKplex.h</label>
        <link refid="PKplex_8h_source"/>
      </node>
      <node id="129">
        <label>ViennaRNA/PS_dot.h</label>
        <link refid="PS__dot_8h"/>
      </node>
      <node id="10">
        <label>ViennaRNA/ali_plex.h</label>
        <link refid="ali__plex_8h_source"/>
      </node>
      <node id="11">
        <label>ViennaRNA/alifold.h</label>
        <link refid="alifold_8h"/>
      </node>
      <node id="106">
        <label>ViennaRNA/aln_util.h</label>
        <link refid="aln__util_8h"/>
      </node>
      <node id="109">
        <label>ViennaRNA/alphabet.h</label>
        <link refid="alphabet_8h"/>
        <childnode refid="110" relation="include">
        </childnode>
      </node>
      <node id="12">
        <label>ViennaRNA/backtrack/exterior.h</label>
        <link refid="backtrack_2exterior_8h"/>
        <childnode refid="13" relation="include">
        </childnode>
      </node>
      <node id="17">
        <label>ViennaRNA/backtrack/global.h</label>
        <link refid="backtrack_2global_8h"/>
        <childnode refid="11" relation="include">
        </childnode>
        <childnode refid="18" relation="include">
        </childnode>
        <childnode refid="19" relation="include">
        </childnode>
      </node>
      <node id="20">
        <label>ViennaRNA/backtrack/gquad.h</label>
        <link refid="backtrack_2gquad_8h_source"/>
        <childnode refid="21" relation="include">
        </childnode>
      </node>
      <node id="22">
        <label>ViennaRNA/backtrack/hairpin.h</label>
        <link refid="backtrack_2hairpin_8h"/>
        <childnode refid="23" relation="include">
        </childnode>
      </node>
      <node id="25">
        <label>ViennaRNA/backtrack/internal.h</label>
        <link refid="backtrack_2internal_8h"/>
        <childnode refid="26" relation="include">
        </childnode>
      </node>
      <node id="28">
        <label>ViennaRNA/backtrack/multibranch.h</label>
        <link refid="backtrack_2multibranch_8h"/>
        <childnode refid="29" relation="include">
        </childnode>
      </node>
      <node id="104">
        <label>ViennaRNA/boltzmann_sampling.h</label>
        <link refid="boltzmann__sampling_8h"/>
      </node>
      <node id="114">
        <label>ViennaRNA/centroid.h</label>
        <link refid="centroid_8h"/>
      </node>
      <node id="31">
        <label>ViennaRNA/cofold.h</label>
        <link refid="cofold_8h"/>
      </node>
      <node id="39">
        <label>ViennaRNA/combinatorics.h</label>
        <link refid="combinatorics_8h"/>
      </node>
      <node id="38">
        <label>ViennaRNA/combinatorics/basic.h</label>
        <link refid="combinatorics_2basic_8h"/>
        <childnode refid="39" relation="include">
        </childnode>
      </node>
      <node id="55">
        <label>ViennaRNA/commands.h</label>
        <link refid="commands_8h"/>
      </node>
      <node id="73">
        <label>ViennaRNA/concentrations.h</label>
        <link refid="concentrations_8h"/>
        <childnode refid="74" relation="include">
        </childnode>
      </node>
      <node id="3">
        <label>ViennaRNA/constraints.h</label>
        <link refid="constraints_8h"/>
      </node>
      <node id="96">
        <label>ViennaRNA/constraints/SHAPE.h</label>
        <link refid="constraints_2SHAPE_8h"/>
        <childnode refid="3" relation="include">
        </childnode>
      </node>
      <node id="40">
        <label>ViennaRNA/constraints/basic.h</label>
        <link refid="constraints_2basic_8h"/>
        <childnode refid="3" relation="include">
        </childnode>
        <childnode refid="2" relation="include">
        </childnode>
        <childnode refid="34" relation="include">
        </childnode>
      </node>
      <node id="2">
        <label>ViennaRNA/constraints/hard.h</label>
        <link refid="hard_8h"/>
        <childnode refid="3" relation="include">
        </childnode>
        <childnode refid="4" relation="include">
        </childnode>
        <childnode refid="5" relation="include">
        </childnode>
        <childnode refid="36" relation="include">
        </childnode>
        <childnode refid="37" relation="include">
        </childnode>
        <childnode refid="79" relation="include">
        </childnode>
      </node>
      <node id="32">
        <label>ViennaRNA/constraints/ligand.h</label>
        <link refid="ligand_8h"/>
        <childnode refid="3" relation="include">
        </childnode>
        <childnode refid="33" relation="include">
        </childnode>
      </node>
      <node id="34">
        <label>ViennaRNA/constraints/soft.h</label>
        <link refid="soft_8h"/>
        <childnode refid="3" relation="include">
        </childnode>
        <childnode refid="35" relation="include">
        </childnode>
        <childnode refid="5" relation="include">
        </childnode>
        <childnode refid="36" relation="include">
        </childnode>
        <childnode refid="37" relation="include">
        </childnode>
        <childnode refid="79" relation="include">
        </childnode>
      </node>
      <node id="97">
        <label>ViennaRNA/constraints_SHAPE.h</label>
        <link refid="constraints__SHAPE_8h"/>
      </node>
      <node id="4">
        <label>ViennaRNA/constraints_hard.h</label>
        <link refid="constraints__hard_8h"/>
      </node>
      <node id="33">
        <label>ViennaRNA/constraints_ligand.h</label>
        <link refid="constraints__ligand_8h"/>
      </node>
      <node id="35">
        <label>ViennaRNA/constraints_soft.h</label>
        <link refid="constraints__soft_8h"/>
      </node>
      <node id="41">
        <label>ViennaRNA/data/transform.h</label>
        <link refid="transform_8h"/>
      </node>
      <node id="119">
        <label>ViennaRNA/data_structures.h</label>
        <link refid="data__structures_8h"/>
      </node>
      <node id="5">
        <label>ViennaRNA/datastructures/basic.h</label>
        <link refid="datastructures_2basic_8h"/>
        <childnode refid="6" relation="include">
        </childnode>
        <childnode refid="7" relation="include">
        </childnode>
        <childnode refid="8" relation="include">
        </childnode>
        <childnode refid="9" relation="include">
        </childnode>
        <childnode refid="10" relation="include">
        </childnode>
        <childnode refid="11" relation="include">
        </childnode>
        <childnode refid="12" relation="include">
        </childnode>
        <childnode refid="17" relation="include">
        </childnode>
        <childnode refid="20" relation="include">
        </childnode>
        <childnode refid="22" relation="include">
        </childnode>
        <childnode refid="25" relation="include">
        </childnode>
        <childnode refid="28" relation="include">
        </childnode>
        <childnode refid="31" relation="include">
        </childnode>
        <childnode refid="32" relation="include">
        </childnode>
        <childnode refid="34" relation="include">
        </childnode>
        <childnode refid="119" relation="include">
        </childnode>
        <childnode refid="42" relation="include">
        </childnode>
        <childnode refid="120" relation="include">
        </childnode>
        <childnode refid="44" relation="include">
        </childnode>
        <childnode refid="45" relation="include">
        </childnode>
        <childnode refid="46" relation="include">
        </childnode>
        <childnode refid="36" relation="include">
        </childnode>
        <childnode refid="47" relation="include">
        </childnode>
        <childnode refid="48" relation="include">
        </childnode>
        <childnode refid="18" relation="include">
        </childnode>
        <childnode refid="121" relation="include">
        </childnode>
        <childnode refid="50" relation="include">
        </childnode>
        <childnode refid="52" relation="include">
        </childnode>
        <childnode refid="53" relation="include">
        </childnode>
        <childnode refid="123" relation="include">
        </childnode>
        <childnode refid="124" relation="include">
        </childnode>
        <childnode refid="63" relation="include">
        </childnode>
        <childnode refid="64" relation="include">
        </childnode>
        <childnode refid="65" relation="include">
        </childnode>
        <childnode refid="66" relation="include">
        </childnode>
        <childnode refid="70" relation="include">
        </childnode>
        <childnode refid="72" relation="include">
        </childnode>
        <childnode refid="74" relation="include">
        </childnode>
        <childnode refid="126" relation="include">
        </childnode>
        <childnode refid="76" relation="include">
        </childnode>
        <childnode refid="77" relation="include">
        </childnode>
        <childnode refid="79" relation="include">
        </childnode>
        <childnode refid="89" relation="include">
        </childnode>
        <childnode refid="80" relation="include">
        </childnode>
        <childnode refid="127" relation="include">
        </childnode>
        <childnode refid="128" relation="include">
        </childnode>
        <childnode refid="133" relation="include">
        </childnode>
        <childnode refid="134" relation="include">
        </childnode>
        <childnode refid="81" relation="include">
        </childnode>
        <childnode refid="83" relation="include">
        </childnode>
        <childnode refid="136" relation="include">
        </childnode>
        <childnode refid="137" relation="include">
        </childnode>
        <childnode refid="138" relation="include">
        </childnode>
        <childnode refid="139" relation="include">
        </childnode>
        <childnode refid="113" relation="include">
        </childnode>
        <childnode refid="84" relation="include">
        </childnode>
        <childnode refid="86" relation="include">
        </childnode>
        <childnode refid="118" relation="include">
        </childnode>
        <childnode refid="142" relation="include">
        </childnode>
        <childnode refid="144" relation="include">
        </childnode>
      </node>
      <node id="42">
        <label>ViennaRNA/datastructures/dp_matrices.h</label>
        <link refid="datastructures_2dp__matrices_8h"/>
        <childnode refid="5" relation="include">
        </childnode>
        <childnode refid="43" relation="include">
        </childnode>
        <childnode refid="37" relation="include">
        </childnode>
      </node>
      <node id="1">
        <label>ViennaRNA/datastructures/sparse_mx.h</label>
        <link refid="sparse__mx_8h"/>
        <childnode refid="2" relation="include">
        </childnode>
        <childnode refid="42" relation="include">
        </childnode>
        <childnode refid="45" relation="include">
        </childnode>
        <childnode refid="65" relation="include">
        </childnode>
        <childnode refid="88" relation="include">
        </childnode>
      </node>
      <node id="43">
        <label>ViennaRNA/dp_matrices.h</label>
        <link refid="dp__matrices_8h"/>
      </node>
      <node id="120">
        <label>ViennaRNA/duplex.h</label>
        <link refid="duplex_8h"/>
      </node>
      <node id="82">
        <label>ViennaRNA/equilibrium_probs.h</label>
        <link refid="equilibrium__probs_8h"/>
      </node>
      <node id="49">
        <label>ViennaRNA/eval.h</label>
        <link refid="eval_8h"/>
      </node>
      <node id="44">
        <label>ViennaRNA/eval/exterior.h</label>
        <link refid="eval_2exterior_8h"/>
        <childnode refid="13" relation="include">
        </childnode>
      </node>
      <node id="45">
        <label>ViennaRNA/eval/gquad.h</label>
        <link refid="eval_2gquad_8h"/>
        <childnode refid="21" relation="include">
        </childnode>
      </node>
      <node id="46">
        <label>ViennaRNA/eval/hairpin.h</label>
        <link refid="eval_2hairpin_8h_source"/>
        <childnode refid="23" relation="include">
        </childnode>
      </node>
      <node id="36">
        <label>ViennaRNA/eval/internal.h</label>
        <link refid="eval_2internal_8h"/>
        <childnode refid="26" relation="include">
        </childnode>
      </node>
      <node id="47">
        <label>ViennaRNA/eval/multibranch.h</label>
        <link refid="eval_2multibranch_8h"/>
        <childnode refid="29" relation="include">
        </childnode>
      </node>
      <node id="48">
        <label>ViennaRNA/eval/structures.h</label>
        <link refid="eval_2structures_8h"/>
        <childnode refid="49" relation="include">
        </childnode>
        <childnode refid="18" relation="include">
        </childnode>
      </node>
      <node id="14">
        <label>ViennaRNA/exterior_loops.h</label>
        <link refid="exterior__loops_8h"/>
      </node>
      <node id="125">
        <label>ViennaRNA/file_formats.h</label>
        <link refid="file__formats_8h"/>
      </node>
      <node id="57">
        <label>ViennaRNA/findpath.h</label>
        <link refid="findpath_8h"/>
      </node>
      <node id="18">
        <label>ViennaRNA/fold.h</label>
        <link refid="fold_8h"/>
      </node>
      <node id="37">
        <label>ViennaRNA/fold_compound.h</label>
        <link refid="fold__compound_8h"/>
        <childnode refid="6" relation="include">
        </childnode>
        <childnode refid="7" relation="include">
        </childnode>
        <childnode refid="12" relation="include">
        </childnode>
        <childnode refid="17" relation="include">
        </childnode>
        <childnode refid="20" relation="include">
        </childnode>
        <childnode refid="22" relation="include">
        </childnode>
        <childnode refid="25" relation="include">
        </childnode>
        <childnode refid="28" relation="include">
        </childnode>
        <childnode refid="38" relation="include">
        </childnode>
        <childnode refid="40" relation="include">
        </childnode>
        <childnode refid="2" relation="include">
        </childnode>
        <childnode refid="32" relation="include">
        </childnode>
        <childnode refid="34" relation="include">
        </childnode>
        <childnode refid="41" relation="include">
        </childnode>
        <childnode refid="5" relation="include">
        </childnode>
        <childnode refid="42" relation="include">
        </childnode>
        <childnode refid="44" relation="include">
        </childnode>
        <childnode refid="45" relation="include">
        </childnode>
        <childnode refid="46" relation="include">
        </childnode>
        <childnode refid="36" relation="include">
        </childnode>
        <childnode refid="47" relation="include">
        </childnode>
        <childnode refid="48" relation="include">
        </childnode>
        <childnode refid="50" relation="include">
        </childnode>
        <childnode refid="52" relation="include">
        </childnode>
        <childnode refid="53" relation="include">
        </childnode>
        <childnode refid="54" relation="include">
        </childnode>
        <childnode refid="56" relation="include">
        </childnode>
        <childnode refid="58" relation="include">
        </childnode>
        <childnode refid="61" relation="include">
        </childnode>
        <childnode refid="62" relation="include">
        </childnode>
        <childnode refid="63" relation="include">
        </childnode>
        <childnode refid="64" relation="include">
        </childnode>
        <childnode refid="65" relation="include">
        </childnode>
        <childnode refid="66" relation="include">
        </childnode>
        <childnode refid="67" relation="include">
        </childnode>
        <childnode refid="70" relation="include">
        </childnode>
        <childnode refid="71" relation="include">
        </childnode>
        <childnode refid="72" relation="include">
        </childnode>
        <childnode refid="76" relation="include">
        </childnode>
        <childnode refid="77" relation="include">
        </childnode>
        <childnode refid="88" relation="include">
        </childnode>
        <childnode refid="79" relation="include">
        </childnode>
        <childnode refid="89" relation="include">
        </childnode>
        <childnode refid="80" relation="include">
        </childnode>
        <childnode refid="91" relation="include">
        </childnode>
        <childnode refid="93" relation="include">
        </childnode>
        <childnode refid="94" relation="include">
        </childnode>
        <childnode refid="81" relation="include">
        </childnode>
        <childnode refid="83" relation="include">
        </childnode>
        <childnode refid="95" relation="include">
        </childnode>
        <childnode refid="98" relation="include">
        </childnode>
        <childnode refid="103" relation="include">
        </childnode>
        <childnode refid="105" relation="include">
        </childnode>
        <childnode refid="108" relation="include">
        </childnode>
        <childnode refid="111" relation="include">
        </childnode>
        <childnode refid="113" relation="include">
        </childnode>
        <childnode refid="115" relation="include">
        </childnode>
        <childnode refid="86" relation="include">
        </childnode>
        <childnode refid="116" relation="include">
        </childnode>
        <childnode refid="118" relation="include">
        </childnode>
      </node>
      <node id="121">
        <label>ViennaRNA/fold_vars.h</label>
        <link refid="fold__vars_8h"/>
        <childnode refid="122" relation="include">
        </childnode>
      </node>
      <node id="21">
        <label>ViennaRNA/gquad.h</label>
        <link refid="gquad_8h"/>
      </node>
      <node id="51">
        <label>ViennaRNA/grammar.h</label>
        <link refid="grammar_8h"/>
      </node>
      <node id="50">
        <label>ViennaRNA/grammar/basic.h</label>
        <link refid="grammar_2basic_8h"/>
        <childnode refid="37" relation="include">
        </childnode>
        <childnode refid="51" relation="include">
        </childnode>
        <childnode refid="52" relation="include">
        </childnode>
        <childnode refid="53" relation="include">
        </childnode>
      </node>
      <node id="52">
        <label>ViennaRNA/grammar/mfe.h</label>
        <link refid="grammar_2mfe_8h"/>
        <childnode refid="51" relation="include">
        </childnode>
      </node>
      <node id="53">
        <label>ViennaRNA/grammar/partfunc.h</label>
        <link refid="partfunc_8h"/>
        <childnode refid="51" relation="include">
        </childnode>
      </node>
      <node id="24">
        <label>ViennaRNA/hairpin_loops.h</label>
        <link refid="hairpin__loops_8h"/>
      </node>
      <node id="123">
        <label>ViennaRNA/heat_capacity.h</label>
        <link refid="heat__capacity_8h"/>
      </node>
      <node id="27">
        <label>ViennaRNA/interior_loops.h</label>
        <link refid="interior__loops_8h"/>
      </node>
      <node id="54">
        <label>ViennaRNA/io/commands.h</label>
        <link refid="io_2commands_8h"/>
        <childnode refid="55" relation="include">
        </childnode>
      </node>
      <node id="124">
        <label>ViennaRNA/io/file_formats.h</label>
        <link refid="io_2file__formats_8h"/>
        <childnode refid="125" relation="include">
        </childnode>
      </node>
      <node id="56">
        <label>ViennaRNA/landscape/findpath.h</label>
        <link refid="landscape_2findpath_8h"/>
        <childnode refid="57" relation="include">
        </childnode>
      </node>
      <node id="58">
        <label>ViennaRNA/landscape/neighbor.h</label>
        <link refid="landscape_2neighbor_8h"/>
        <childnode refid="59" relation="include">
        </childnode>
        <childnode refid="60" relation="include">
        </childnode>
      </node>
      <node id="61">
        <label>ViennaRNA/landscape/paths.h</label>
        <link refid="paths_8h"/>
        <childnode refid="56" relation="include">
        </childnode>
      </node>
      <node id="62">
        <label>ViennaRNA/landscape/walk.h</label>
        <link refid="landscape_2walk_8h"/>
        <childnode refid="60" relation="include">
        </childnode>
      </node>
      <node id="16">
        <label>ViennaRNA/loop_energies.h</label>
        <link refid="loop__energies_8h"/>
      </node>
      <node id="15">
        <label>ViennaRNA/loops/all.h</label>
        <link refid="all_8h"/>
        <childnode refid="16" relation="include">
        </childnode>
      </node>
      <node id="13">
        <label>ViennaRNA/loops/external.h</label>
        <link refid="external_8h"/>
        <childnode refid="14" relation="include">
        </childnode>
        <childnode refid="15" relation="include">
        </childnode>
      </node>
      <node id="23">
        <label>ViennaRNA/loops/hairpin.h</label>
        <link refid="loops_2hairpin_8h"/>
        <childnode refid="24" relation="include">
        </childnode>
        <childnode refid="15" relation="include">
        </childnode>
      </node>
      <node id="26">
        <label>ViennaRNA/loops/internal.h</label>
        <link refid="loops_2internal_8h"/>
        <childnode refid="27" relation="include">
        </childnode>
        <childnode refid="15" relation="include">
        </childnode>
      </node>
      <node id="29">
        <label>ViennaRNA/loops/multibranch.h</label>
        <link refid="loops_2multibranch_8h"/>
        <childnode refid="15" relation="include">
        </childnode>
        <childnode refid="30" relation="include">
        </childnode>
      </node>
      <node id="19">
        <label>ViennaRNA/mfe.h</label>
        <link refid="mfe_8h"/>
      </node>
      <node id="63">
        <label>ViennaRNA/mfe/exterior.h</label>
        <link refid="mfe_2exterior_8h"/>
        <childnode refid="13" relation="include">
        </childnode>
      </node>
      <node id="64">
        <label>ViennaRNA/mfe/global.h</label>
        <link refid="mfe_2global_8h"/>
        <childnode refid="11" relation="include">
        </childnode>
        <childnode refid="31" relation="include">
        </childnode>
        <childnode refid="18" relation="include">
        </childnode>
        <childnode refid="19" relation="include">
        </childnode>
      </node>
      <node id="65">
        <label>ViennaRNA/mfe/gquad.h</label>
        <link refid="mfe_2gquad_8h"/>
        <childnode refid="21" relation="include">
        </childnode>
      </node>
      <node id="66">
        <label>ViennaRNA/mfe/internal.h</label>
        <link refid="mfe_2internal_8h"/>
        <childnode refid="26" relation="include">
        </childnode>
      </node>
      <node id="67">
        <label>ViennaRNA/mfe/local.h</label>
        <link refid="mfe_2local_8h"/>
        <childnode refid="68" relation="include">
        </childnode>
        <childnode refid="69" relation="include">
        </childnode>
      </node>
      <node id="70">
        <label>ViennaRNA/mfe/multibranch.h</label>
        <link refid="mfe_2multibranch_8h"/>
        <childnode refid="29" relation="include">
        </childnode>
      </node>
      <node id="69">
        <label>ViennaRNA/mfe_window.h</label>
        <link refid="mfe__window_8h"/>
      </node>
      <node id="71">
        <label>ViennaRNA/mm.h</label>
        <link refid="mm_8h"/>
      </node>
      <node id="30">
        <label>ViennaRNA/multibranch_loops.h</label>
        <link refid="multibranch__loops_8h"/>
      </node>
      <node id="59">
        <label>ViennaRNA/neighbor.h</label>
        <link refid="neighbor_8h"/>
      </node>
      <node id="122">
        <label>ViennaRNA/pair_mat.h</label>
        <link refid="pair__mat_8h_source"/>
      </node>
      <node id="75">
        <label>ViennaRNA/params.h</label>
        <link refid="params_8h"/>
      </node>
      <node id="72">
        <label>ViennaRNA/params/basic.h</label>
        <link refid="params_2basic_8h"/>
        <childnode refid="6" relation="include">
        </childnode>
        <childnode refid="7" relation="include">
        </childnode>
        <childnode refid="8" relation="include">
        </childnode>
        <childnode refid="11" relation="include">
        </childnode>
        <childnode refid="20" relation="include">
        </childnode>
        <childnode refid="28" relation="include">
        </childnode>
        <childnode refid="31" relation="include">
        </childnode>
        <childnode refid="73" relation="include">
        </childnode>
        <childnode refid="5" relation="include">
        </childnode>
        <childnode refid="44" relation="include">
        </childnode>
        <childnode refid="45" relation="include">
        </childnode>
        <childnode refid="46" relation="include">
        </childnode>
        <childnode refid="36" relation="include">
        </childnode>
        <childnode refid="47" relation="include">
        </childnode>
        <childnode refid="48" relation="include">
        </childnode>
        <childnode refid="18" relation="include">
        </childnode>
        <childnode refid="37" relation="include">
        </childnode>
        <childnode refid="63" relation="include">
        </childnode>
        <childnode refid="65" relation="include">
        </childnode>
        <childnode refid="66" relation="include">
        </childnode>
        <childnode refid="70" relation="include">
        </childnode>
        <childnode refid="75" relation="include">
        </childnode>
        <childnode refid="74" relation="include">
        </childnode>
        <childnode refid="76" relation="include">
        </childnode>
        <childnode refid="77" relation="include">
        </childnode>
        <childnode refid="79" relation="include">
        </childnode>
        <childnode refid="80" relation="include">
        </childnode>
        <childnode refid="81" relation="include">
        </childnode>
        <childnode refid="83" relation="include">
        </childnode>
        <childnode refid="84" relation="include">
        </childnode>
        <childnode refid="86" relation="include">
        </childnode>
      </node>
      <node id="143">
        <label>ViennaRNA/params/salt.h</label>
        <link refid="salt_8h"/>
        <childnode refid="46" relation="include">
        </childnode>
        <childnode refid="36" relation="include">
        </childnode>
        <childnode refid="79" relation="include">
        </childnode>
      </node>
      <node id="78">
        <label>ViennaRNA/part_func.h</label>
        <link refid="part__func_8h"/>
      </node>
      <node id="74">
        <label>ViennaRNA/part_func_co.h</label>
        <link refid="part__func__co_8h"/>
      </node>
      <node id="126">
        <label>ViennaRNA/part_func_up.h</label>
        <link refid="part__func__up_8h"/>
      </node>
      <node id="90">
        <label>ViennaRNA/part_func_window.h</label>
        <link refid="part__func__window_8h"/>
      </node>
      <node id="76">
        <label>ViennaRNA/partfunc/exterior.h</label>
        <link refid="partfunc_2exterior_8h"/>
        <childnode refid="13" relation="include">
        </childnode>
      </node>
      <node id="77">
        <label>ViennaRNA/partfunc/global.h</label>
        <link refid="partfunc_2global_8h"/>
        <childnode refid="11" relation="include">
        </childnode>
        <childnode refid="78" relation="include">
        </childnode>
        <childnode refid="74" relation="include">
        </childnode>
      </node>
      <node id="88">
        <label>ViennaRNA/partfunc/gquad.h</label>
        <link refid="partfunc_2gquad_8h"/>
        <childnode refid="21" relation="include">
        </childnode>
      </node>
      <node id="79">
        <label>ViennaRNA/partfunc/internal.h</label>
        <link refid="partfunc_2internal_8h"/>
        <childnode refid="26" relation="include">
        </childnode>
      </node>
      <node id="89">
        <label>ViennaRNA/partfunc/local.h</label>
        <link refid="partfunc_2local_8h"/>
        <childnode refid="8" relation="include">
        </childnode>
        <childnode refid="90" relation="include">
        </childnode>
      </node>
      <node id="80">
        <label>ViennaRNA/partfunc/multibranch.h</label>
        <link refid="partfunc_2multibranch_8h"/>
        <childnode refid="29" relation="include">
        </childnode>
      </node>
      <node id="91">
        <label>ViennaRNA/partfunc/multifold.h</label>
        <link refid="multifold_8h_source"/>
        <childnode refid="92" relation="include">
        </childnode>
      </node>
      <node id="93">
        <label>ViennaRNA/perturbation_fold.h</label>
        <link refid="perturbation__fold_8h"/>
      </node>
      <node id="92">
        <label>ViennaRNA/pf_multifold.h</label>
        <link refid="pf__multifold_8h"/>
      </node>
      <node id="94">
        <label>ViennaRNA/pk_plex.h</label>
        <link refid="pk__plex_8h"/>
        <childnode refid="9" relation="include">
        </childnode>
      </node>
      <node id="127">
        <label>ViennaRNA/plex.h</label>
        <link refid="plex_8h_source"/>
      </node>
      <node id="130">
        <label>ViennaRNA/plot_layouts.h</label>
        <link refid="plot__layouts_8h"/>
      </node>
      <node id="132">
        <label>ViennaRNA/plot_structure.h</label>
        <link refid="plot__structure_8h"/>
      </node>
      <node id="135">
        <label>ViennaRNA/plot_utils.h</label>
        <link refid="plot__utils_8h"/>
      </node>
      <node id="128">
        <label>ViennaRNA/plotting/layouts.h</label>
        <link refid="layouts_8h"/>
        <childnode refid="129" relation="include">
        </childnode>
        <childnode refid="130" relation="include">
        </childnode>
        <childnode refid="131" relation="include">
        </childnode>
      </node>
      <node id="133">
        <label>ViennaRNA/plotting/probabilities.h</label>
        <link refid="probabilities_8h"/>
        <childnode refid="129" relation="include">
        </childnode>
      </node>
      <node id="131">
        <label>ViennaRNA/plotting/structures.h</label>
        <link refid="plotting_2structures_8h"/>
        <childnode refid="129" relation="include">
        </childnode>
        <childnode refid="132" relation="include">
        </childnode>
      </node>
      <node id="134">
        <label>ViennaRNA/plotting/utils.h</label>
        <link refid="plotting_2utils_8h"/>
        <childnode refid="135" relation="include">
        </childnode>
      </node>
      <node id="81">
        <label>ViennaRNA/probabilities/basepairs.h</label>
        <link refid="basepairs_8h"/>
        <childnode refid="82" relation="include">
        </childnode>
        <childnode refid="78" relation="include">
        </childnode>
        <childnode refid="74" relation="include">
        </childnode>
      </node>
      <node id="83">
        <label>ViennaRNA/probabilities/structures.h</label>
        <link refid="probabilities_2structures_8h"/>
        <childnode refid="82" relation="include">
        </childnode>
        <childnode refid="74" relation="include">
        </childnode>
      </node>
      <node id="95">
        <label>ViennaRNA/probing/SHAPE.h</label>
        <link refid="probing_2SHAPE_8h"/>
        <childnode refid="96" relation="include">
        </childnode>
        <childnode refid="97" relation="include">
        </childnode>
      </node>
      <node id="98">
        <label>ViennaRNA/probing/basic.h</label>
        <link refid="probing_2basic_8h"/>
        <childnode refid="95" relation="include">
        </childnode>
        <childnode refid="99" relation="include">
        </childnode>
        <childnode refid="100" relation="include">
        </childnode>
        <childnode refid="101" relation="include">
        </childnode>
        <childnode refid="102" relation="include">
        </childnode>
      </node>
      <node id="99">
        <label>ViennaRNA/probing/strategy_deigan.h</label>
        <link refid="strategy__deigan_8h"/>
      </node>
      <node id="100">
        <label>ViennaRNA/probing/strategy_eddy.h</label>
        <link refid="strategy__eddy_8h"/>
      </node>
      <node id="101">
        <label>ViennaRNA/probing/strategy_nlogp.h</label>
        <link refid="strategy__nlogp_8h"/>
      </node>
      <node id="102">
        <label>ViennaRNA/probing/strategy_zarringhalam.h</label>
        <link refid="strategy__zarringhalam_8h"/>
      </node>
      <node id="136">
        <label>ViennaRNA/profiledist.h</label>
        <link refid="profiledist_8h"/>
      </node>
      <node id="103">
        <label>ViennaRNA/sampling/basic.h</label>
        <link refid="sampling_2basic_8h"/>
        <childnode refid="11" relation="include">
        </childnode>
        <childnode refid="104" relation="include">
        </childnode>
        <childnode refid="78" relation="include">
        </childnode>
      </node>
      <node id="112">
        <label>ViennaRNA/sequence.h</label>
        <link refid="sequence_8h"/>
      </node>
      <node id="105">
        <label>ViennaRNA/sequences/alignments.h</label>
        <link refid="sequences_2alignments_8h_source"/>
        <childnode refid="11" relation="include">
        </childnode>
        <childnode refid="106" relation="include">
        </childnode>
        <childnode refid="107" relation="include">
        </childnode>
      </node>
      <node id="108">
        <label>ViennaRNA/sequences/alphabet.h</label>
        <link refid="sequences_2alphabet_8h"/>
        <childnode refid="109" relation="include">
        </childnode>
        <childnode refid="45" relation="include">
        </childnode>
        <childnode refid="65" relation="include">
        </childnode>
      </node>
      <node id="111">
        <label>ViennaRNA/sequences/sequence.h</label>
        <link refid="sequences_2sequence_8h"/>
        <childnode refid="37" relation="include">
        </childnode>
        <childnode refid="112" relation="include">
        </childnode>
      </node>
      <node id="137">
        <label>ViennaRNA/snofold.h</label>
        <link refid="snofold_8h_source"/>
      </node>
      <node id="138">
        <label>ViennaRNA/snoop.h</label>
        <link refid="snoop_8h_source"/>
      </node>
      <node id="145">
        <label>ViennaRNA/string_utils.h</label>
        <link refid="string__utils_8h"/>
      </node>
      <node id="140">
        <label>ViennaRNA/structure_utils.h</label>
        <link refid="structure__utils_8h"/>
      </node>
      <node id="139">
        <label>ViennaRNA/structures/benchmark.h</label>
        <link refid="benchmark_8h"/>
        <childnode refid="140" relation="include">
        </childnode>
        <childnode refid="141" relation="include">
        </childnode>
      </node>
      <node id="113">
        <label>ViennaRNA/structures/centroid.h</label>
        <link refid="structures_2centroid_8h"/>
        <childnode refid="114" relation="include">
        </childnode>
      </node>
      <node id="84">
        <label>ViennaRNA/structures/mea.h</label>
        <link refid="mea_8h_source"/>
        <childnode refid="85" relation="include">
        </childnode>
      </node>
      <node id="87">
        <label>ViennaRNA/subopt.h</label>
        <link refid="subopt_8h"/>
      </node>
      <node id="115">
        <label>ViennaRNA/subopt/gquad.h</label>
        <link refid="subopt_2gquad_8h"/>
      </node>
      <node id="86">
        <label>ViennaRNA/subopt/wuchty.h</label>
        <link refid="wuchty_8h"/>
        <childnode refid="87" relation="include">
        </childnode>
      </node>
      <node id="116">
        <label>ViennaRNA/subopt/zuker.h</label>
        <link refid="zuker_8h_source"/>
        <childnode refid="117" relation="include">
        </childnode>
      </node>
      <node id="117">
        <label>ViennaRNA/subopt_zuker.h</label>
        <link refid="subopt__zuker_8h"/>
      </node>
      <node id="118">
        <label>ViennaRNA/unstructured_domains.h</label>
        <link refid="unstructured__domains_8h"/>
        <childnode refid="5" relation="include">
        </childnode>
        <childnode refid="37" relation="include">
        </childnode>
      </node>
      <node id="110">
        <label>ViennaRNA/utils.h</label>
        <link refid="utils_8h"/>
      </node>
      <node id="107">
        <label>ViennaRNA/utils/alignments.h</label>
        <link refid="utils_2alignments_8h"/>
      </node>
      <node id="142">
        <label>ViennaRNA/utils/basic.h</label>
        <link refid="utils_2basic_8h"/>
        <childnode refid="22" relation="include">
        </childnode>
        <childnode refid="25" relation="include">
        </childnode>
        <childnode refid="28" relation="include">
        </childnode>
        <childnode refid="46" relation="include">
        </childnode>
        <childnode refid="36" relation="include">
        </childnode>
        <childnode refid="47" relation="include">
        </childnode>
        <childnode refid="66" relation="include">
        </childnode>
        <childnode refid="70" relation="include">
        </childnode>
        <childnode refid="122" relation="include">
        </childnode>
        <childnode refid="143" relation="include">
        </childnode>
        <childnode refid="79" relation="include">
        </childnode>
        <childnode refid="80" relation="include">
        </childnode>
        <childnode refid="110" relation="include">
        </childnode>
      </node>
      <node id="144">
        <label>ViennaRNA/utils/strings.h</label>
        <link refid="strings_8h"/>
        <childnode refid="145" relation="include">
        </childnode>
        <childnode refid="110" relation="include">
        </childnode>
      </node>
      <node id="141">
        <label>ViennaRNA/utils/structures.h</label>
        <link refid="utils_2structures_8h"/>
        <childnode refid="110" relation="include">
        </childnode>
      </node>
      <node id="60">
        <label>ViennaRNA/walk.h</label>
        <link refid="walk_8h"/>
      </node>
    </invincdepgraph>
    <sectiondef kind="define">
      <memberdef kind="define" id="sparse__mx_8h_1ad33d167715c868edfc0017e21b0f3b3e" prot="public" static="no">
        <name>vrna_smx_csr</name>
        <param><defname>TYPE</defname></param>
        <initializer>  vrna_smx_csr_##TYPE##_t</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="8" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="8" bodyend="9"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1a1b12c38a3c1fc4ba36a445e508e2897f" prot="public" static="no">
        <name>VRNA_SMX_CSR_DECLARE</name>
        <param><defname>TYPE</defname></param>
        <initializer>  typedef struct vrna_smx_csr_##TYPE##_s  \
  {                                       \
    unsigned char    dirty;               \
    <ref refid="group__array__utils_1ga97302e41c5c33faae998eb956c8f1f91" kindref="member">vrna_array</ref>(TYPE) v;                   \
    <ref refid="group__array__utils_1ga97302e41c5c33faae998eb956c8f1f91" kindref="member">vrna_array</ref>(unsigned int) col_idx;     \
    <ref refid="group__array__utils_1ga97302e41c5c33faae998eb956c8f1f91" kindref="member">vrna_array</ref>(unsigned int) row_idx;     \
  } vrna_smx_csr_##TYPE##_t;</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="11" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="11" bodyend="18"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1a6ab43d89fa570ae331d17f7ad981ca34" prot="public" static="no">
        <name>VRNA_SMX_CSR_DECLARE_INIT</name>
        <param><defname>TYPE</defname></param>
        <initializer>  vrna_smx_csr_##TYPE##_t *                   \
  vrna_smx_csr_##TYPE##_init(unsigned int n);</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="21" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="21" bodyend="23"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1a344721eeff865645816a711e323d82e2" prot="public" static="no">
        <name>VRNA_SMX_CSR_DECLARE_FREE</name>
        <param><defname>TYPE</defname></param>
        <initializer>  void                                                      \
  vrna_smx_csr_##TYPE##_free(vrna_smx_csr_##TYPE##_t *mx);</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="26" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="26" bodyend="28"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1a222a97a41df7e899d36e1ec4ede67668" prot="public" static="no">
        <name>VRNA_SMX_CSR_DECLARE_INSERT</name>
        <param><defname>TYPE</defname></param>
        <initializer>  void  \
  vrna_smx_csr_##TYPE##_insert(vrna_smx_csr_##TYPE##_t  *mx,  \
                               unsigned int             i,    \
                               unsigned int             j,    \
                               TYPE                     e);</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="35" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="35" bodyend="40"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1a5b1b948d091272712544049f98890316" prot="public" static="no">
        <name>VRNA_SMX_CSR_DECLARE_GET</name>
        <param><defname>TYPE</defname></param>
        <initializer>  TYPE  \
  vrna_smx_csr_##TYPE##_get(vrna_smx_csr_##TYPE##_t *mx,        \
                            unsigned int            i,          \
                            unsigned int            j,          \
                            TYPE                    default_v);</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="43" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="43" bodyend="48"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1a72212f172fcd3c05855c4f35cba76ea7" prot="public" static="no">
        <name>VRNA_SMX_CSR_DECLARE_GET_SIZE</name>
        <param><defname>TYPE</defname></param>
        <initializer>  size_t                                                        \
  vrna_smx_csr_##TYPE##_get_size(vrna_smx_csr_##TYPE##_t  *mx);</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="51" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="51" bodyend="53"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1a40e7a2980c64c147e2e204c767136f3d" prot="public" static="no">
        <name>VRNA_SMX_CSR_DECLARE_GET_ENTRY</name>
        <param><defname>TYPE</defname></param>
        <initializer>  TYPE  \
  vrna_smx_csr_##TYPE##_get_entry(vrna_smx_csr_##TYPE##_t *mx,        \
                                  size_t                  pos,        \
                                  unsigned int            *i,         \
                                  unsigned int            *j,         \
                                  TYPE                    default_v);</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="57" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="57" bodyend="63"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1a65d591bc5f1c87dd394fa891e24110d6" prot="public" static="no">
        <name>VRNA_SMX_CSR_DECLARE_ALL</name>
        <param><defname>TYPE</defname></param>
        <initializer>        VRNA_SMX_CSR_DECLARE(TYPE)            \
        VRNA_SMX_CSR_DECLARE_INIT(TYPE)       \
        VRNA_SMX_CSR_DECLARE_FREE(TYPE)       \
        VRNA_SMX_CSR_DECLARE_INSERT(TYPE)     \
        VRNA_SMX_CSR_DECLARE_GET(TYPE)        \
        VRNA_SMX_CSR_DECLARE_GET_SIZE(TYPE)   \
        VRNA_SMX_CSR_DECLARE_GET_ENTRY(TYPE)</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="66" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="66" bodyend="73"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1aa3eac56cbb95165059071d07ecac2929" prot="public" static="no">
        <name>GENERIC_SMX_CSR_PTR_FN_DEFINE</name>
        <param><defname>SMX_CSR_PTR</defname></param>
        <param><defname>FN_NAME</defname></param>
        <initializer>  _Generic((SMX_CSR_PTR), \
      vrna_smx_csr_vrna_uchar_t *: (vrna_smx_csr_vrna_uchar ## _ ## FN_NAME), \
      vrna_smx_csr_int_t *: (vrna_smx_csr_int ## _ ## FN_NAME), \
      vrna_smx_csr_float_t *: (vrna_smx_csr_float ## _ ## FN_NAME), \
      vrna_smx_csr_double_t *: (vrna_smx_csr_double ## _ ## FN_NAME), \
      vrna_smx_csr_FLT_OR_DBL_t *: (vrna_smx_csr_FLT_OR_DBL ## _ ## FN_NAME))</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="78" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="78" bodyend="84"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1a6b46d8a837245ebacab4a70c523db7a1" prot="public" static="no">
        <name>vrna_smx_csr_insert</name>
        <param><defname>X</defname></param>
        <param><defname>i</defname></param>
        <param><defname>j</defname></param>
        <param><defname>v</defname></param>
        <initializer>  GENERIC_SMX_CSR_PTR_FN_DEFINE((X), insert)((X), i, j, v)</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="86" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="86" bodyend="87"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1abec77f38d3a77eb40572966bc84608ce" prot="public" static="no">
        <name>vrna_smx_csr_get</name>
        <param><defname>X</defname></param>
        <param><defname>i</defname></param>
        <param><defname>j</defname></param>
        <param><defname>d</defname></param>
        <initializer>  GENERIC_SMX_CSR_PTR_FN_DEFINE((X), get)((X), i, j, d)</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="89" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="89" bodyend="90"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1aefb3f96d329e779d1dd8ae21a8332557" prot="public" static="no">
        <name>vrna_smx_csr_get_size</name>
        <param><defname>X</defname></param>
        <initializer>  GENERIC_SMX_CSR_PTR_FN_DEFINE((X), get_size)((X))</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="92" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="92" bodyend="93"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1ae50133726c7c1ea088f63c0fda515616" prot="public" static="no">
        <name>vrna_smx_csr_get_entry</name>
        <param><defname>X</defname></param>
        <param><defname>p</defname></param>
        <param><defname>i</defname></param>
        <param><defname>j</defname></param>
        <param><defname>d</defname></param>
        <initializer>  GENERIC_SMX_CSR_PTR_FN_DEFINE((X), get_entry)((X), p, i, j, d)</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="95" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="95" bodyend="96"/>
      </memberdef>
      <memberdef kind="define" id="sparse__mx_8h_1a1306d5aeb9b5649d831a6bf958105e77" prot="public" static="no">
        <name>vrna_smx_csr_free</name>
        <param><defname>X</defname></param>
        <initializer>  GENERIC_SMX_CSR_PTR_FN_DEFINE((X), free)((X))</initializer>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="98" column="9" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="98" bodyend="99"/>
      </memberdef>
    </sectiondef>
    <sectiondef kind="typedef">
      <memberdef kind="typedef" id="sparse__mx_8h_1ae4dcf820b3253ea1d71dd15e4d7fedad" prot="public" static="no">
        <type>unsigned char</type>
        <definition>typedef unsigned char vrna_uchar</definition>
        <argsstring></argsstring>
        <name>vrna_uchar</name>
        <briefdescription>
        </briefdescription>
        <detaileddescription>
        </detaileddescription>
        <inbodydescription>
        </inbodydescription>
        <location file="ViennaRNA/datastructures/sparse_mx.h" line="104" column="25" bodyfile="ViennaRNA/datastructures/sparse_mx.h" bodystart="104" bodyend="-1"/>
      </memberdef>
    </sectiondef>
    <briefdescription>
    </briefdescription>
    <detaileddescription>
    </detaileddescription>
    <programlisting>
<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/><sp/><sp/>VIENNA_RNA_PACKAGE_SPARSE_MATRIX_H</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/><sp/><sp/>VIENNA_RNA_PACKAGE_SPARSE_MATRIX_H</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="3"><highlight class="normal"></highlight></codeline>
<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;stdlib.h&gt;</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="array_8h" kindref="compound">ViennaRNA/datastructures/array.h</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="6"><highlight class="normal"></highlight></codeline>
<codeline lineno="7"><highlight class="normal"></highlight></codeline>
<codeline lineno="8"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>vrna_smx_csr(<sp/>TYPE<sp/>)<sp/>\</highlight></codeline>
<codeline lineno="9"><highlight class="preprocessor"><sp/><sp/>vrna_smx_csr_##TYPE##_t</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="10"><highlight class="normal"></highlight></codeline>
<codeline lineno="11"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_SMX_CSR_DECLARE(<sp/>TYPE<sp/>)<sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="12"><highlight class="preprocessor"><sp/><sp/>typedef<sp/>struct<sp/>vrna_smx_csr_##TYPE##_s<sp/><sp/>\</highlight></codeline>
<codeline lineno="13"><highlight class="preprocessor"><sp/><sp/>{<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="14"><highlight class="preprocessor"><sp/><sp/><sp/><sp/>unsigned<sp/>char<sp/><sp/><sp/><sp/>dirty;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="15"><highlight class="preprocessor"><sp/><sp/><sp/><sp/>vrna_array(TYPE)<sp/>v;<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="16"><highlight class="preprocessor"><sp/><sp/><sp/><sp/>vrna_array(unsigned<sp/>int)<sp/>col_idx;<sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="17"><highlight class="preprocessor"><sp/><sp/><sp/><sp/>vrna_array(unsigned<sp/>int)<sp/>row_idx;<sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="18"><highlight class="preprocessor"><sp/><sp/>}<sp/>vrna_smx_csr_##TYPE##_t;</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="19"><highlight class="normal"></highlight></codeline>
<codeline lineno="20"><highlight class="normal"></highlight></codeline>
<codeline lineno="21"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_SMX_CSR_DECLARE_INIT(<sp/>TYPE<sp/>)<sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="22"><highlight class="preprocessor"><sp/><sp/>vrna_smx_csr_##TYPE##_t<sp/>*<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="23"><highlight class="preprocessor"><sp/><sp/>vrna_smx_csr_##TYPE##_init(unsigned<sp/>int<sp/>n);</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="24"><highlight class="normal"></highlight></codeline>
<codeline lineno="25"><highlight class="normal"></highlight></codeline>
<codeline lineno="26"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_SMX_CSR_DECLARE_FREE(<sp/>TYPE<sp/>)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="27"><highlight class="preprocessor"><sp/><sp/>void<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="28"><highlight class="preprocessor"><sp/><sp/>vrna_smx_csr_##TYPE##_free(vrna_smx_csr_##TYPE##_t<sp/>*mx);</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="29"><highlight class="normal"></highlight></codeline>
<codeline lineno="30"><highlight class="normal"></highlight></codeline>
<codeline lineno="31"><highlight class="normal"></highlight><highlight class="comment">/*<sp/><sp/>note,<sp/>here<sp/>we<sp/>assume<sp/>data<sp/>to<sp/>be<sp/>stored<sp/>arrives<sp/>in<sp/>an<sp/>ordered<sp/>way,</highlight></codeline>
<codeline lineno="32"><highlight class="comment"><sp/>*<sp/><sp/>in<sp/>particular<sp/>row-wise<sp/>(low<sp/>to<sp/>high)<sp/>and<sp/>columns<sp/>low<sp/>to<sp/>high,<sp/>in</highlight></codeline>
<codeline lineno="33"><highlight class="comment"><sp/>*<sp/><sp/>that<sp/>order!</highlight></codeline>
<codeline lineno="34"><highlight class="comment"><sp/>*/</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="35"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_SMX_CSR_DECLARE_INSERT(<sp/>TYPE<sp/>)<sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="36"><highlight class="preprocessor"><sp/><sp/>void<sp/><sp/>\</highlight></codeline>
<codeline lineno="37"><highlight class="preprocessor"><sp/><sp/>vrna_smx_csr_##TYPE##_insert(vrna_smx_csr_##TYPE##_t<sp/><sp/>*mx,<sp/><sp/>\</highlight></codeline>
<codeline lineno="38"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unsigned<sp/>int<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>i,<sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="39"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unsigned<sp/>int<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>j,<sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="40"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>TYPE<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>e);</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="41"><highlight class="normal"></highlight></codeline>
<codeline lineno="42"><highlight class="normal"></highlight></codeline>
<codeline lineno="43"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_SMX_CSR_DECLARE_GET(<sp/>TYPE<sp/>)<sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="44"><highlight class="preprocessor"><sp/><sp/>TYPE<sp/><sp/>\</highlight></codeline>
<codeline lineno="45"><highlight class="preprocessor"><sp/><sp/>vrna_smx_csr_##TYPE##_get(vrna_smx_csr_##TYPE##_t<sp/>*mx,<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="46"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unsigned<sp/>int<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>i,<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="47"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unsigned<sp/>int<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>j,<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="48"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>TYPE<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>default_v);</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="49"><highlight class="normal"></highlight></codeline>
<codeline lineno="50"><highlight class="normal"></highlight></codeline>
<codeline lineno="51"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_SMX_CSR_DECLARE_GET_SIZE(<sp/>TYPE<sp/>)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="52"><highlight class="preprocessor"><sp/><sp/>size_t<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="53"><highlight class="preprocessor"><sp/><sp/>vrna_smx_csr_##TYPE##_get_size(vrna_smx_csr_##TYPE##_t<sp/><sp/>*mx);</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="54"><highlight class="normal"></highlight></codeline>
<codeline lineno="55"><highlight class="normal"></highlight></codeline>
<codeline lineno="56"><highlight class="normal"></highlight></codeline>
<codeline lineno="57"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_SMX_CSR_DECLARE_GET_ENTRY(<sp/>TYPE<sp/>)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="58"><highlight class="preprocessor"><sp/><sp/>TYPE<sp/><sp/>\</highlight></codeline>
<codeline lineno="59"><highlight class="preprocessor"><sp/><sp/>vrna_smx_csr_##TYPE##_get_entry(vrna_smx_csr_##TYPE##_t<sp/>*mx,<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="60"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>size_t<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>pos,<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="61"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unsigned<sp/>int<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>*i,<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="62"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>unsigned<sp/>int<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>*j,<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="63"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>TYPE<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>default_v);</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="64"><highlight class="normal"></highlight></codeline>
<codeline lineno="65"><highlight class="normal"></highlight></codeline>
<codeline lineno="66"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_SMX_CSR_DECLARE_ALL(<sp/>TYPE<sp/>)<sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="67"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>VRNA_SMX_CSR_DECLARE(TYPE)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="68"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>VRNA_SMX_CSR_DECLARE_INIT(TYPE)<sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="69"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>VRNA_SMX_CSR_DECLARE_FREE(TYPE)<sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="70"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>VRNA_SMX_CSR_DECLARE_INSERT(TYPE)<sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="71"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>VRNA_SMX_CSR_DECLARE_GET(TYPE)<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="72"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>VRNA_SMX_CSR_DECLARE_GET_SIZE(TYPE)<sp/><sp/><sp/>\</highlight></codeline>
<codeline lineno="73"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>VRNA_SMX_CSR_DECLARE_GET_ENTRY(TYPE)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="74"><highlight class="normal"></highlight></codeline>
<codeline lineno="75"><highlight class="normal"></highlight></codeline>
<codeline lineno="76"><highlight class="normal"></highlight><highlight class="preprocessor">#ifndef<sp/>VRNA_DISABLE_C11_FEATURES</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="77"><highlight class="normal"></highlight></codeline>
<codeline lineno="78"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>GENERIC_SMX_CSR_PTR_FN_DEFINE(SMX_CSR_PTR,<sp/>FN_NAME)<sp/>\</highlight></codeline>
<codeline lineno="79"><highlight class="preprocessor"><sp/><sp/>_Generic((SMX_CSR_PTR),<sp/>\</highlight></codeline>
<codeline lineno="80"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/>vrna_smx_csr_vrna_uchar_t<sp/>*:<sp/>(vrna_smx_csr_vrna_uchar<sp/>##<sp/>_<sp/>##<sp/>FN_NAME),<sp/>\</highlight></codeline>
<codeline lineno="81"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/>vrna_smx_csr_int_t<sp/>*:<sp/>(vrna_smx_csr_int<sp/>##<sp/>_<sp/>##<sp/>FN_NAME),<sp/>\</highlight></codeline>
<codeline lineno="82"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/>vrna_smx_csr_float_t<sp/>*:<sp/>(vrna_smx_csr_float<sp/>##<sp/>_<sp/>##<sp/>FN_NAME),<sp/>\</highlight></codeline>
<codeline lineno="83"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/>vrna_smx_csr_double_t<sp/>*:<sp/>(vrna_smx_csr_double<sp/>##<sp/>_<sp/>##<sp/>FN_NAME),<sp/>\</highlight></codeline>
<codeline lineno="84"><highlight class="preprocessor"><sp/><sp/><sp/><sp/><sp/><sp/>vrna_smx_csr_FLT_OR_DBL_t<sp/>*:<sp/>(vrna_smx_csr_FLT_OR_DBL<sp/>##<sp/>_<sp/>##<sp/>FN_NAME))</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="85"><highlight class="normal"></highlight></codeline>
<codeline lineno="86"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>vrna_smx_csr_insert(X,<sp/>i,<sp/>j,<sp/>v)<sp/>\</highlight></codeline>
<codeline lineno="87"><highlight class="preprocessor"><sp/><sp/>GENERIC_SMX_CSR_PTR_FN_DEFINE((X),<sp/>insert)((X),<sp/>i,<sp/>j,<sp/>v)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="88"><highlight class="normal"></highlight></codeline>
<codeline lineno="89"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>vrna_smx_csr_get(X,<sp/>i,<sp/>j,<sp/>d)<sp/>\</highlight></codeline>
<codeline lineno="90"><highlight class="preprocessor"><sp/><sp/>GENERIC_SMX_CSR_PTR_FN_DEFINE((X),<sp/>get)((X),<sp/>i,<sp/>j,<sp/>d)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="91"><highlight class="normal"></highlight></codeline>
<codeline lineno="92"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>vrna_smx_csr_get_size(X)<sp/>\</highlight></codeline>
<codeline lineno="93"><highlight class="preprocessor"><sp/><sp/>GENERIC_SMX_CSR_PTR_FN_DEFINE((X),<sp/>get_size)((X))</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="94"><highlight class="normal"></highlight></codeline>
<codeline lineno="95"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>vrna_smx_csr_get_entry(X,<sp/>p,<sp/>i,<sp/>j,<sp/>d)<sp/>\</highlight></codeline>
<codeline lineno="96"><highlight class="preprocessor"><sp/><sp/>GENERIC_SMX_CSR_PTR_FN_DEFINE((X),<sp/>get_entry)((X),<sp/>p,<sp/>i,<sp/>j,<sp/>d)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="97"><highlight class="normal"></highlight></codeline>
<codeline lineno="98"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>vrna_smx_csr_free(X)<sp/>\</highlight></codeline>
<codeline lineno="99"><highlight class="preprocessor"><sp/><sp/>GENERIC_SMX_CSR_PTR_FN_DEFINE((X),<sp/>free)((X))</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="100"><highlight class="normal"></highlight></codeline>
<codeline lineno="101"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="102"><highlight class="normal"></highlight></codeline>
<codeline lineno="103"><highlight class="normal"></highlight><highlight class="comment">/*<sp/>Below<sp/>follows<sp/>a<sp/>list<sp/>of<sp/>sparse<sp/>matrix<sp/>declarations<sp/>for<sp/>different<sp/>data<sp/>types<sp/>*/</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="104"><highlight class="normal"></highlight><highlight class="keyword">typedef</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">char</highlight><highlight class="normal"><sp/><sp/><sp/>vrna_uchar;</highlight></codeline>
<codeline lineno="105"><highlight class="normal"></highlight></codeline>
<codeline lineno="106"><highlight class="normal">VRNA_SMX_CSR_DECLARE_ALL(vrna_uchar)</highlight></codeline>
<codeline lineno="107"><highlight class="normal">VRNA_SMX_CSR_DECLARE_ALL(</highlight><highlight class="keywordtype">int</highlight><highlight class="normal">)</highlight></codeline>
<codeline lineno="108"><highlight class="normal">VRNA_SMX_CSR_DECLARE_ALL(</highlight><highlight class="keywordtype">float</highlight><highlight class="normal">)</highlight></codeline>
<codeline lineno="109"><highlight class="normal">VRNA_SMX_CSR_DECLARE_ALL(</highlight><highlight class="keywordtype">double</highlight><highlight class="normal">)</highlight></codeline>
<codeline lineno="110"><highlight class="normal">VRNA_SMX_CSR_DECLARE_ALL(<ref refid="group__data__structures_1ga31125aeace516926bf7f251f759b6126" kindref="member">FLT_OR_DBL</ref>)</highlight></codeline>
<codeline lineno="111"><highlight class="normal"></highlight></codeline>
<codeline lineno="112"><highlight class="normal"></highlight></codeline>
<codeline lineno="113"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
    </programlisting>
    <location file="ViennaRNA/datastructures/sparse_mx.h"/>
  </compounddef>
</doxygen>
