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    <sectiondef kind="define">
      <member refid="group__data__utils_1ga36f0a5b889aafd5fe7ae0f662ea6198c" kind="define"><name>VRNA_TRANSFORM_ENFORCE_DOMAIN_SOURCE</name></member>
      <member refid="group__data__utils_1gab611a93f10a243918c91829800444e7f" kind="define"><name>VRNA_TRANSFORM_ENFORCE_DOMAIN_TARGET</name></member>
      <member refid="group__data__utils_1ga9330be06bc6e577d4c4e3d334aba0f66" kind="define"><name>VRNA_TRANSFORM_ENFORCE_DOMAINS</name></member>
      <member refid="group__data__utils_1ga65b5e5dfe172ccf5e947dbc19624947b" kind="define"><name>VRNA_TRANSFORM_MAP_SOURCE_LOW</name></member>
      <member refid="group__data__utils_1ga0be990162372438311640b8cf980bf7b" kind="define"><name>VRNA_TRANSFORM_MAP_SOURCE_HIGH</name></member>
      <member refid="group__data__utils_1ga527175a47181c235777a20e7e8f36639" kind="define"><name>VRNA_TRANSFORM_MAP_SOURCE</name></member>
      <member refid="group__data__utils_1ga784a9ec67dd752ca94c038ba52507565" kind="define"><name>VRNA_TRANSFORM_MAP_TARGET_LOW</name></member>
      <member refid="group__data__utils_1ga3d280c9e33c2aec8c9752f75c29f73a5" kind="define"><name>VRNA_TRANSFORM_MAP_TARGET_HIGH</name></member>
      <member refid="group__data__utils_1gab090386263e09cd72cbf288a88e98c17" kind="define"><name>VRNA_TRANSFORM_MAP_TARGET</name></member>
      <member refid="group__data__utils_1gabd1089d2cbdcfdae45587dd4b06774b2" kind="define"><name>VRNA_TRANSFORM_MAP</name></member>
      <member refid="group__data__utils_1gaf307a8f442a2544f12c3e92495a67a6a" kind="define"><name>VRNA_TRANSFORM_DEFAULT</name></member>
    </sectiondef>
    <sectiondef kind="func">
      <member refid="group__data__utils_1ga5d49c7cddf8e50aec0b0921bb735fff0" kind="function"><name>vrna_data_lin_transform</name></member>
    </sectiondef>
    <briefdescription>
<para>This module provides function to transform linear data. </para>
    </briefdescription>
    <detaileddescription>
    </detaileddescription>
    <programlisting>
<codeline lineno="1"><highlight class="preprocessor">#ifndef<sp/>VIENNA_RNA_PACKAGE_DATA_TRANSFORM_H</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="2"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VIENNA_RNA_PACKAGE_DATA_TRANSFORM_H</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="3"><highlight class="normal"></highlight></codeline>
<codeline lineno="4"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="fold__compound_8h" kindref="compound">ViennaRNA/fold_compound.h</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="5"><highlight class="normal"></highlight><highlight class="preprocessor">#include<sp/>&lt;<ref refid="functions_8h" kindref="compound">ViennaRNA/math/functions.h</ref>&gt;</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="6"><highlight class="normal"></highlight></codeline>
<codeline lineno="12"><highlight class="normal"></highlight></codeline>
<codeline lineno="17"><highlight class="normal"></highlight></codeline>
<codeline lineno="18"><highlight class="normal"></highlight></codeline>
<codeline lineno="23" refid="group__data__utils_1ga36f0a5b889aafd5fe7ae0f662ea6198c" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_TRANSFORM_ENFORCE_DOMAIN_SOURCE<sp/><sp/>(1<sp/>&lt;&lt;<sp/>1)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="24"><highlight class="normal"></highlight></codeline>
<codeline lineno="25"><highlight class="normal"></highlight></codeline>
<codeline lineno="30" refid="group__data__utils_1gab611a93f10a243918c91829800444e7f" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_TRANSFORM_ENFORCE_DOMAIN_TARGET<sp/><sp/>(1<sp/>&lt;&lt;<sp/>2)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="31"><highlight class="normal"></highlight></codeline>
<codeline lineno="32"><highlight class="normal"></highlight></codeline>
<codeline lineno="37" refid="group__data__utils_1ga9330be06bc6e577d4c4e3d334aba0f66" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_TRANSFORM_ENFORCE_DOMAINS<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(VRNA_TRANSFORM_ENFORCE_DOMAIN_SOURCE<sp/>|<sp/>VRNA_TRANSFORM_ENFORCE_DOMAIN_TARGET)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="38"><highlight class="normal"></highlight></codeline>
<codeline lineno="39"><highlight class="normal"></highlight></codeline>
<codeline lineno="44" refid="group__data__utils_1ga65b5e5dfe172ccf5e947dbc19624947b" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_TRANSFORM_MAP_SOURCE_LOW<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(1<sp/>&lt;&lt;<sp/>3)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="45"><highlight class="normal"></highlight></codeline>
<codeline lineno="46"><highlight class="normal"></highlight></codeline>
<codeline lineno="51" refid="group__data__utils_1ga0be990162372438311640b8cf980bf7b" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_TRANSFORM_MAP_SOURCE_HIGH<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(1<sp/>&lt;&lt;<sp/>4)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="52"><highlight class="normal"></highlight></codeline>
<codeline lineno="53"><highlight class="normal"></highlight></codeline>
<codeline lineno="58" refid="group__data__utils_1ga527175a47181c235777a20e7e8f36639" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_TRANSFORM_MAP_SOURCE<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(VRNA_TRANSFORM_MAP_SOURCE_LOW<sp/>|<sp/>VRNA_TRANSFORM_MAP_SOURCE_HIGH)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="59"><highlight class="normal"></highlight></codeline>
<codeline lineno="60"><highlight class="normal"></highlight></codeline>
<codeline lineno="65" refid="group__data__utils_1ga784a9ec67dd752ca94c038ba52507565" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_TRANSFORM_MAP_TARGET_LOW<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(1<sp/>&lt;&lt;<sp/>5)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="66"><highlight class="normal"></highlight></codeline>
<codeline lineno="67"><highlight class="normal"></highlight></codeline>
<codeline lineno="72" refid="group__data__utils_1ga3d280c9e33c2aec8c9752f75c29f73a5" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_TRANSFORM_MAP_TARGET_HIGH<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(1<sp/>&lt;&lt;<sp/>6)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="73"><highlight class="normal"></highlight></codeline>
<codeline lineno="74"><highlight class="normal"></highlight></codeline>
<codeline lineno="79" refid="group__data__utils_1gab090386263e09cd72cbf288a88e98c17" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_TRANSFORM_MAP_TARGET<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(VRNA_TRANSFORM_MAP_TARGET_LOW<sp/>|<sp/>VRNA_TRANSFORM_MAP_TARGET_HIGH)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="80"><highlight class="normal"></highlight></codeline>
<codeline lineno="81"><highlight class="normal"></highlight></codeline>
<codeline lineno="86" refid="group__data__utils_1gabd1089d2cbdcfdae45587dd4b06774b2" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_TRANSFORM_MAP<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(VRNA_TRANSFORM_MAP_SOURCE_LOW<sp/>|<sp/>VRNA_TRANSFORM_MAP_SOURCE_HIGH<sp/>|<sp/>VRNA_TRANSFORM_MAP_TARGET_LOW<sp/>|<sp/>VRNA_TRANSFORM_MAP_TARGET_HIGH)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="87"><highlight class="normal"></highlight></codeline>
<codeline lineno="88"><highlight class="normal"></highlight></codeline>
<codeline lineno="93" refid="group__data__utils_1gaf307a8f442a2544f12c3e92495a67a6a" refkind="member"><highlight class="normal"></highlight><highlight class="preprocessor">#define<sp/>VRNA_TRANSFORM_DEFAULT<sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>(VRNA_TRANSFORM_ENFORCE_DOMAINS<sp/>|<sp/>VRNA_TRANSFORM_MAP)</highlight><highlight class="normal"></highlight></codeline>
<codeline lineno="94"><highlight class="normal"></highlight></codeline>
<codeline lineno="95"><highlight class="normal"></highlight></codeline>
<codeline lineno="153"><highlight class="normal"></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/>*</highlight></codeline>
<codeline lineno="154" refid="group__data__utils_1ga5d49c7cddf8e50aec0b0921bb735fff0" refkind="member"><highlight class="normal"><ref refid="group__data__utils_1ga5d49c7cddf8e50aec0b0921bb735fff0" kindref="member">vrna_data_lin_transform</ref>(</highlight><highlight class="keyword">const</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>*data,</highlight></codeline>
<codeline lineno="155"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">size_t</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>data_size,</highlight></codeline>
<codeline lineno="156"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="group__math__scalar_1ga868f4010e57fb868ce11804b77f04c2f" kindref="member">vrna_math_fun_dbl_f</ref><sp/><sp/><sp/><sp/><sp/>transform_cb,</highlight></codeline>
<codeline lineno="157"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><ref refid="group__math__scalar_1ga486680b7d43688e2bcbec959a547ffee" kindref="member">vrna_math_fun_dbl_opt_t</ref><sp/>transform_opt,</highlight></codeline>
<codeline lineno="158"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>domain[4],</highlight></codeline>
<codeline lineno="159"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">double</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>oob_value,</highlight></codeline>
<codeline lineno="160"><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/></highlight><highlight class="keywordtype">unsigned</highlight><highlight class="normal"><sp/></highlight><highlight class="keywordtype">int</highlight><highlight class="normal"><sp/><sp/><sp/><sp/><sp/><sp/><sp/><sp/>options);</highlight></codeline>
<codeline lineno="161"><highlight class="normal"></highlight></codeline>
<codeline lineno="162"><highlight class="normal"></highlight></codeline>
<codeline lineno="166"><highlight class="normal"></highlight></codeline>
<codeline lineno="167"><highlight class="normal"></highlight><highlight class="preprocessor">#endif</highlight></codeline>
    </programlisting>
    <location file="ViennaRNA/data/transform.h"/>
  </compounddef>
</doxygen>
