#include "SubstitutionModel.h"
#include "AbstractSubstitutionModel.h"
#include "ProteinSubstitutionModel.h"
#include "NucleotideSubstitutionModel.h"
#include "JCnuc.h"
#include "K80.h"
#include "T92.h"
#include "HKY85.h"
#include "F84.h"
#include "TN93.h"
#include "GTR.h"
#include "L95.h"
#include "DSO78.h"
#include "JTT92.h"
#include "JCprot.h"
#include "UserProteinSubstitutionModel.h"
#include "MarkovModulatedSubstitutionModel.h"
#include "G2001.h"
#include "TS98.h"
#include "SubstitutionModelFactory.h"
#include "RateDistributionFactory.h"
#include "SubstitutionModelSet.h"
#include "RE08.h"

#include "WordReversibleSubstitutionModel.h"
#include "TripletReversibleSubstitutionModel.h"
#include "CodonNeutralReversibleSubstitutionModel.h"
#include "CodonAsynonymousReversibleSubstitutionModel.h"
#include "CodonNeutralFrequenciesReversibleSubstitutionModel.h"
#include "CodonAsynonymousFrequenciesReversibleSubstitutionModel.h"
#include "GY94.h"
#include "MG94.h"
#include "YN98.h"

#include "MixedSubstitutionModel.h"
